RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 PXDNQ92626 1479 aa10.28□□□□□ -0.76
PMS1-208ENST00000421722 NUP155O75694 1391 aa10.27□□□□□ -0.76
PMS1-208ENST00000421722 LRPPRCP42704 1394 aaKnown RBP10.27□□□□□ -0.76
PMS1-208ENST00000421722 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.76
PMS1-208ENST00000421722 ORAI2Q96SN7 254 aa10.27□□□□□ -0.77
PMS1-208ENST00000421722 CDC42BPGQ6DT37 1551 aa10.27□□□□□ -0.77
PMS1-208ENST00000421722 GLI3P10071 1580 aa10.26□□□□□ -0.77
PMS1-208ENST00000421722 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
PMS1-208ENST00000421722 SLIT2O94813 1529 aa10.26□□□□□ -0.77
PMS1-208ENST00000421722 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
PMS1-208ENST00000421722 UNC5CLQ8IV45 518 aa10.26□□□□□ -0.77
PMS1-208ENST00000421722 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
PMS1-208ENST00000421722 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
PMS1-208ENST00000421722 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
PMS1-208ENST00000421722 KIF1BO60333 1816 aa10.24□□□□□ -0.77
PMS1-208ENST00000421722 CLTCL1P53675 1640 aa10.24□□□□□ -0.77
PMS1-208ENST00000421722 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
PMS1-208ENST00000421722 BRWD3Q6RI45 1802 aa10.22□□□□□ -0.77
PMS1-208ENST00000421722 VPS72Q15906 364 aa10.22□□□□□ -0.77
PMS1-208ENST00000421722 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
PMS1-208ENST00000421722 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
PMS1-208ENST00000421722 LOC105371045A0A1W2PR82 267 aa10.22□□□□□ -0.77
PMS1-208ENST00000421722 USP32Q8NFA0 1604 aa10.21□□□□□ -0.78
PMS1-208ENST00000421722 BAG6P46379 1132 aa10.21□□□□□ -0.78
PMS1-208ENST00000421722 DEFB132Q7Z7B7 95 aa10.21□□□□□ -0.78
PMS1-208ENST00000421722 SEPT12Q8IYM1 358 aa10.21□□□□□ -0.78
PMS1-208ENST00000421722 SPATA31A3Q5VYP0 1347 aa10.2□□□□□ -0.78
PMS1-208ENST00000421722 ESCO1Q5FWF5 840 aa10.2□□□□□ -0.78
PMS1-208ENST00000421722 CCDC144AA2RUR9 1427 aa10.19□□□□□ -0.78
PMS1-208ENST00000421722 TECPR2O15040 1411 aa10.19□□□□□ -0.78
PMS1-208ENST00000421722 NAIPQ13075 1403 aa10.19□□□□□ -0.78
PMS1-208ENST00000421722 HRCP23327 699 aa10.19□□□□□ -0.78
PMS1-208ENST00000421722 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
PMS1-208ENST00000421722 RGPD1P0DJD0 1748 aa10.18□□□□□ -0.78
PMS1-208ENST00000421722 DISP2A7MBM2 1401 aa10.17□□□□□ -0.78
PMS1-208ENST00000421722 FMN2Q9NZ56 1722 aa10.17□□□□□ -0.78
PMS1-208ENST00000421722 PPLO60437 1756 aa10.17□□□□□ -0.78
PMS1-208ENST00000421722 PLCH1Q4KWH8 1693 aa10.17□□□□□ -0.78
PMS1-208ENST00000421722 KNDC1Q76NI1 1749 aa10.17□□□□□ -0.78
PMS1-208ENST00000421722 SBNO1A3KN83 1393 aa10.16□□□□□ -0.78
PMS1-208ENST00000421722 FOXO3O43524 673 aa10.16□□□□□ -0.78
PMS1-208ENST00000421722 PSME1Q06323 249 aa10.16□□□□□ -0.78
PMS1-208ENST00000421722 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
PMS1-208ENST00000421722 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
PMS1-208ENST00000421722 KRT28Q7Z3Y7 464 aa10.15□□□□□ -0.78
PMS1-208ENST00000421722 ABCC11Q96J66 1382 aa10.15□□□□□ -0.78
PMS1-208ENST00000421722 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
PMS1-208ENST00000421722 ABCA3Q99758 1704 aa10.14□□□□□ -0.79
PMS1-208ENST00000421722 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
PMS1-208ENST00000421722 NRAPQ86VF7 1730 aa10.13□□□□□ -0.79
PMS1-208ENST00000421722 XPCQ01831 940 aaPredicted RBP10.13□□□□□ -0.79
PMS1-208ENST00000421722 PARD3Q8TEW0 1356 aa10.12□□□□□ -0.79
PMS1-208ENST00000421722 ADGRB2O60241 1585 aa10.12□□□□□ -0.79
PMS1-208ENST00000421722 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
PMS1-208ENST00000421722 COL14A1Q05707 1796 aaKnown RBP10.11□□□□□ -0.79
PMS1-208ENST00000421722 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
PMS1-208ENST00000421722 TNS1Q9HBL0 1735 aaKnown RBP10.11□□□□□ -0.79
PMS1-208ENST00000421722 NRXN1Q9ULB1 1477 aa10.11□□□□□ -0.79
PMS1-208ENST00000421722 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
PMS1-208ENST00000421722 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
PMS1-208ENST00000421722 PHF8Q9UPP1 1060 aa10.1□□□□□ -0.79
PMS1-208ENST00000421722 THSD7AQ9UPZ6 1657 aa10.1□□□□□ -0.79
PMS1-208ENST00000421722 ANKRD30BQ9BXX2 1392 aa10.1□□□□□ -0.79
PMS1-208ENST00000421722 YY1P25490 414 aa10.09□□□□□ -0.79
PMS1-208ENST00000421722 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
PMS1-208ENST00000421722 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
PMS1-208ENST00000421722 ANKARQ7Z5J8 1434 aa10.08□□□□□ -0.8
PMS1-208ENST00000421722 WAPLQ7Z5K2 1190 aa10.08□□□□□ -0.8
PMS1-208ENST00000421722 FAM83GA6ND36 823 aa10.08□□□□□ -0.8
PMS1-208ENST00000421722 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
PMS1-208ENST00000421722 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
PMS1-208ENST00000421722 CAMKK2Q96RR4 588 aa10.07□□□□□ -0.8
PMS1-208ENST00000421722 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
PMS1-208ENST00000421722 PLEKHH1Q9ULM0 1364 aa10.07□□□□□ -0.8
PMS1-208ENST00000421722 DCAF8L1A6NGE4 600 aa10.07□□□□□ -0.8
PMS1-208ENST00000421722 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
PMS1-208ENST00000421722 RREB1Q92766 1687 aa10.06□□□□□ -0.8
PMS1-208ENST00000421722 STK26Q9P289 416 aa10.06□□□□□ -0.8
PMS1-208ENST00000421722 ADGRF5Q8IZF2 1346 aa10.06□□□□□ -0.8
PMS1-208ENST00000421722 TRPM3Q9HCF6 1732 aaPredicted RBP10.06□□□□□ -0.8
PMS1-208ENST00000421722 NINLQ9Y2I6 1382 aa10.06□□□□□ -0.8
PMS1-208ENST00000421722 A0A0G2JS52 829 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 MYT1Q01538 1121 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 CABLES1Q8TDN4 633 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 PIK3C2GO75747 1445 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 SPATA31E1Q6ZUB1 1445 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 NUTM2FA1L443 756 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 ITGAEP38570 1179 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 ALS2Q96Q42 1657 aa10.05□□□□□ -0.8
PMS1-208ENST00000421722 EIF3AQ14152 1382 aaKnown RBP10.05□□□□□ -0.8
PMS1-208ENST00000421722 EZH2Q15910 746 aaKnown RBP10.04□□□□□ -0.8
PMS1-208ENST00000421722 BTG4Q9NY30 223 aa10.04□□□□□ -0.8
PMS1-208ENST00000421722 DLC1Q96QB1 1528 aa10.04□□□□□ -0.8
PMS1-208ENST00000421722 RGPD8O14715 1765 aaPredicted RBP10.04□□□□□ -0.8
PMS1-208ENST00000421722 NBPF8Q3BBV2 869 aa10.04□□□□□ -0.8
PMS1-208ENST00000421722 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
PMS1-208ENST00000421722 DHX57Q6P158 1386 aaKnown RBP10.03□□□□□ -0.8
PMS1-208ENST00000421722 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
PMS1-208ENST00000421722 CRYBG1Q9Y4K1 1723 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms