RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 PIP4K2BP78356 416 aa19.58■□□□□ 0.72
SCAP-205ENST00000420588 RALGAPBQ86X10 1494 aa19.57■□□□□ 0.72
SCAP-205ENST00000420588 FBXO41Q8TF61 875 aa19.57■□□□□ 0.72
SCAP-205ENST00000420588 ADGRL3Q9HAR2 1447 aa19.57■□□□□ 0.72
SCAP-205ENST00000420588 MINK1Q8N4C8 1332 aaPredicted RBP19.55■□□□□ 0.72
SCAP-205ENST00000420588 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
SCAP-205ENST00000420588 EIF3AQ14152 1382 aaKnown RBP19.55■□□□□ 0.72
SCAP-205ENST00000420588 GPRASP1Q5JY77 1395 aa19.55■□□□□ 0.72
SCAP-205ENST00000420588 CENPJQ9HC77 1338 aaPredicted RBP19.54■□□□□ 0.72
SCAP-205ENST00000420588 HIRIP3Q9BW71 556 aaPredicted RBP19.54■□□□□ 0.72
SCAP-205ENST00000420588 DCCP43146 1447 aa19.52■□□□□ 0.72
SCAP-205ENST00000420588 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.72
SCAP-205ENST00000420588 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
SCAP-205ENST00000420588 NALCNQ8IZF0 1738 aa19.49■□□□□ 0.71
SCAP-205ENST00000420588 ARHGEF28Q8N1W1 1705 aaKnown RBP19.49■□□□□ 0.71
SCAP-205ENST00000420588 WASLO00401 505 aaPredicted RBP19.47■□□□□ 0.71
SCAP-205ENST00000420588 ST20-MTHFSA0A0A6YYL1 179 aa19.45■□□□□ 0.7
SCAP-205ENST00000420588 CDK19Q9BWU1 502 aa19.45■□□□□ 0.7
SCAP-205ENST00000420588 USP47Q96K76 1375 aa19.44■□□□□ 0.7
SCAP-205ENST00000420588 MST1RQ04912 1400 aa19.44■□□□□ 0.7
SCAP-205ENST00000420588 ESCO1Q5FWF5 840 aa19.44■□□□□ 0.7
SCAP-205ENST00000420588 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
SCAP-205ENST00000420588 SRPK2P78362 688 aaKnown RBP19.43■□□□□ 0.7
SCAP-205ENST00000420588 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
SCAP-205ENST00000420588 C1orf167Q5SNV9 1468 aa19.42■□□□□ 0.7
SCAP-205ENST00000420588 SLC24A1O60721 1099 aa19.42■□□□□ 0.7
SCAP-205ENST00000420588 EIF4G2P78344 907 aaKnown RBP eCLIP19.42■□□□□ 0.7
SCAP-205ENST00000420588 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
SCAP-205ENST00000420588 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
SCAP-205ENST00000420588 ZEB1P37275 1124 aaPredicted RBP19.41■□□□□ 0.7
SCAP-205ENST00000420588 BRINP3Q76B58 766 aa19.41■□□□□ 0.7
SCAP-205ENST00000420588 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
SCAP-205ENST00000420588 NUDT16Q96DE0 195 aaKnown RBP19.39■□□□□ 0.69
SCAP-205ENST00000420588 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
SCAP-205ENST00000420588 ADGRB2O60241 1585 aa19.39■□□□□ 0.69
SCAP-205ENST00000420588 FMN2Q9NZ56 1722 aa19.37■□□□□ 0.69
SCAP-205ENST00000420588 PHF8Q9UPP1 1060 aa19.37■□□□□ 0.69
SCAP-205ENST00000420588 ROBO1Q9Y6N7 1651 aa19.36■□□□□ 0.69
SCAP-205ENST00000420588 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
SCAP-205ENST00000420588 SBNO2Q9Y2G9 1366 aa19.36■□□□□ 0.69
SCAP-205ENST00000420588 HSPA5P11021 654 aaKnown RBP19.36■□□□□ 0.69
SCAP-205ENST00000420588 HSPA1LP34931 641 aa19.36■□□□□ 0.69
SCAP-205ENST00000420588 TMF1P82094 1093 aa19.35■□□□□ 0.69
SCAP-205ENST00000420588 PMFBP1Q8TBY8 1022 aa19.35■□□□□ 0.69
SCAP-205ENST00000420588 TESK2Q96S53 571 aa19.35■□□□□ 0.69
SCAP-205ENST00000420588 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
SCAP-205ENST00000420588 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
SCAP-205ENST00000420588 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
SCAP-205ENST00000420588 FOXO3O43524 673 aa19.34■□□□□ 0.69
SCAP-205ENST00000420588 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.68
SCAP-205ENST00000420588 DDX17Q92841 729 aaKnown RBP19.33■□□□□ 0.68
SCAP-205ENST00000420588 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
SCAP-205ENST00000420588 PSME1Q06323 249 aa19.31■□□□□ 0.68
SCAP-205ENST00000420588 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
SCAP-205ENST00000420588 XPCQ01831 940 aaPredicted RBP19.29■□□□□ 0.68
SCAP-205ENST00000420588 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
SCAP-205ENST00000420588 PUS7Q96PZ0 661 aaKnown RBP19.29■□□□□ 0.68
SCAP-205ENST00000420588 CABP1Q9NZU7 370 aa19.29■□□□□ 0.68
SCAP-205ENST00000420588 ATAD2Q6PL18 1390 aa19.29■□□□□ 0.68
SCAP-205ENST00000420588 RGPD8O14715 1765 aaPredicted RBP19.29■□□□□ 0.68
SCAP-205ENST00000420588 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
SCAP-205ENST00000420588 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
SCAP-205ENST00000420588 ATP7BP35670 1465 aa19.28■□□□□ 0.68
SCAP-205ENST00000420588 USP32Q8NFA0 1604 aa19.27■□□□□ 0.68
SCAP-205ENST00000420588 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
SCAP-205ENST00000420588 PPIP5K1Q6PFW1 1433 aa19.26■□□□□ 0.67
SCAP-205ENST00000420588 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
SCAP-205ENST00000420588 ACEP12821 1306 aa19.25■□□□□ 0.67
SCAP-205ENST00000420588 PHLPP1O60346 1717 aa19.25■□□□□ 0.67
SCAP-205ENST00000420588 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
SCAP-205ENST00000420588 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
SCAP-205ENST00000420588 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
SCAP-205ENST00000420588 SOS2Q07890 1332 aaPredicted RBP19.25■□□□□ 0.67
SCAP-205ENST00000420588 ITSN1Q15811 1721 aa19.23■□□□□ 0.67
SCAP-205ENST00000420588 PAK3O75914 559 aaPredicted RBP19.22■□□□□ 0.67
SCAP-205ENST00000420588 LMOD2Q6P5Q4 547 aa19.22■□□□□ 0.67
SCAP-205ENST00000420588 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
SCAP-205ENST00000420588 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
SCAP-205ENST00000420588 NHSL1Q5SYE7 1610 aa19.21■□□□□ 0.67
SCAP-205ENST00000420588 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
SCAP-205ENST00000420588 POLR3AO14802 1390 aaPredicted RBP19.19■□□□□ 0.66
SCAP-205ENST00000420588 JCADQ9P266 1359 aa19.19■□□□□ 0.66
SCAP-205ENST00000420588 TERF2IPQ9NYB0 399 aa19.19■□□□□ 0.66
SCAP-205ENST00000420588 PXDNQ92626 1479 aa19.18■□□□□ 0.66
SCAP-205ENST00000420588 COL16A1Q07092 1604 aaPredicted RBP19.18■□□□□ 0.66
SCAP-205ENST00000420588 TOPAZ1Q8N9V7 1692 aa19.17■□□□□ 0.66
SCAP-205ENST00000420588 SPATA31A3Q5VYP0 1347 aa19.17■□□□□ 0.66
SCAP-205ENST00000420588 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
SCAP-205ENST00000420588 SBNO1A3KN83 1393 aa19.16■□□□□ 0.66
SCAP-205ENST00000420588 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
SCAP-205ENST00000420588 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
SCAP-205ENST00000420588 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
SCAP-205ENST00000420588 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
SCAP-205ENST00000420588 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
SCAP-205ENST00000420588 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
SCAP-205ENST00000420588 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
SCAP-205ENST00000420588 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
SCAP-205ENST00000420588 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
SCAP-205ENST00000420588 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
SCAP-205ENST00000420588 PNPLA6Q8IY17 1366 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms