RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 ZNF697Q5TEC3 545 aa8.64□□□□□ -1.03
LINC00993-201ENST00000420453 LIAT1Q6ZQX7 453 aa8.64□□□□□ -1.03
LINC00993-201ENST00000420453 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
LINC00993-201ENST00000420453 ATAD2BQ9ULI0 1458 aa8.64□□□□□ -1.03
LINC00993-201ENST00000420453 IL27Q8NEV9 243 aa8.63□□□□□ -1.03
LINC00993-201ENST00000420453 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
LINC00993-201ENST00000420453 SLC27A5Q9Y2P5 690 aa8.63□□□□□ -1.03
LINC00993-201ENST00000420453 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
LINC00993-201ENST00000420453 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
LINC00993-201ENST00000420453 LCE2BO14633 110 aa8.61□□□□□ -1.03
LINC00993-201ENST00000420453 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
LINC00993-201ENST00000420453 PARP9Q8IXQ6 854 aa8.61□□□□□ -1.03
LINC00993-201ENST00000420453 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
LINC00993-201ENST00000420453 PRR20EP86478 221 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 PRR20CP86479 221 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 PRR20DP86480 221 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 PRR20BP86481 221 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 PRR20AP86496 221 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 TRIM67Q6ZTA4 783 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 CC2D2AQ9P2K1 1620 aa8.6□□□□□ -1.03
LINC00993-201ENST00000420453 CD46P15529 392 aa8.59□□□□□ -1.03
LINC00993-201ENST00000420453 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
LINC00993-201ENST00000420453 AMHR2Q16671 573 aa8.59□□□□□ -1.03
LINC00993-201ENST00000420453 Q3C1V9 767 aa8.59□□□□□ -1.03
LINC00993-201ENST00000420453 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
LINC00993-201ENST00000420453 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
LINC00993-201ENST00000420453 HMGXB3Q12766 1538 aa8.59□□□□□ -1.03
LINC00993-201ENST00000420453 SUPT5HO00267 1087 aaKnown RBP8.58□□□□□ -1.04
LINC00993-201ENST00000420453 DGAT1O75907 488 aa8.58□□□□□ -1.04
LINC00993-201ENST00000420453 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
LINC00993-201ENST00000420453 RPIAP49247 311 aa8.58□□□□□ -1.04
LINC00993-201ENST00000420453 FCF1Q9Y324 198 aaKnown RBP8.58□□□□□ -1.04
LINC00993-201ENST00000420453 WIZO95785 1651 aa8.57□□□□□ -1.04
LINC00993-201ENST00000420453 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
LINC00993-201ENST00000420453 KDM4AO75164 1064 aa8.57□□□□□ -1.04
LINC00993-201ENST00000420453 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
LINC00993-201ENST00000420453 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
LINC00993-201ENST00000420453 TOP2AP11388 1531 aaKnown RBP8.56□□□□□ -1.04
LINC00993-201ENST00000420453 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
LINC00993-201ENST00000420453 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
LINC00993-201ENST00000420453 MS4A1P11836 297 aa8.56□□□□□ -1.04
LINC00993-201ENST00000420453 USP46P62068 366 aa8.56□□□□□ -1.04
LINC00993-201ENST00000420453 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
LINC00993-201ENST00000420453 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
LINC00993-201ENST00000420453 FAM187AA6NFU0 413 aa8.55□□□□□ -1.04
LINC00993-201ENST00000420453 GDF9O60383 454 aa8.55□□□□□ -1.04
LINC00993-201ENST00000420453 CLCN1P35523 988 aa8.55□□□□□ -1.04
LINC00993-201ENST00000420453 FOXC1Q12948 553 aa8.55□□□□□ -1.04
LINC00993-201ENST00000420453 TTLL12Q14166 644 aaPredicted RBP8.54□□□□□ -1.04
LINC00993-201ENST00000420453 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
LINC00993-201ENST00000420453 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
LINC00993-201ENST00000420453 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
LINC00993-201ENST00000420453 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
LINC00993-201ENST00000420453 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
LINC00993-201ENST00000420453 MYT1Q01538 1121 aa8.52□□□□□ -1.05
LINC00993-201ENST00000420453 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
LINC00993-201ENST00000420453 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
LINC00993-201ENST00000420453 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
LINC00993-201ENST00000420453 FAM217BQ9NTX9 383 aaPredicted RBP8.5□□□□□ -1.05
LINC00993-201ENST00000420453 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
LINC00993-201ENST00000420453 HOXA2O43364 376 aa8.49□□□□□ -1.05
LINC00993-201ENST00000420453 MMP16P51512 607 aa8.49□□□□□ -1.05
LINC00993-201ENST00000420453 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
LINC00993-201ENST00000420453 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
LINC00993-201ENST00000420453 HLA-CQ95604 372 aa8.46□□□□□ -1.06
LINC00993-201ENST00000420453 TTC24A2A3L6 582 aaPredicted RBP8.45□□□□□ -1.06
LINC00993-201ENST00000420453 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
LINC00993-201ENST00000420453 CCDC88BA6NC98 1476 aa8.45□□□□□ -1.06
LINC00993-201ENST00000420453 TRIM32Q13049 653 aa8.44□□□□□ -1.06
LINC00993-201ENST00000420453 TOR4AQ9NXH8 423 aa8.44□□□□□ -1.06
LINC00993-201ENST00000420453 GUCA2AQ02747 115 aa8.43□□□□□ -1.06
LINC00993-201ENST00000420453 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
LINC00993-201ENST00000420453 WNT7AO00755 349 aa8.42□□□□□ -1.06
LINC00993-201ENST00000420453 ST8SIA5O15466 376 aa8.42□□□□□ -1.06
LINC00993-201ENST00000420453 JUNDP17535 347 aa8.42□□□□□ -1.06
LINC00993-201ENST00000420453 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
LINC00993-201ENST00000420453 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
LINC00993-201ENST00000420453 FDX1P10109 184 aa8.41□□□□□ -1.06
LINC00993-201ENST00000420453 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
LINC00993-201ENST00000420453 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
LINC00993-201ENST00000420453 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
LINC00993-201ENST00000420453 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
LINC00993-201ENST00000420453 SNIP1Q8TAD8 396 aaKnown RBP8.4□□□□□ -1.06
LINC00993-201ENST00000420453 AXIN1O15169 862 aa8.39□□□□□ -1.07
LINC00993-201ENST00000420453 AVPP01185 164 aa8.39□□□□□ -1.07
LINC00993-201ENST00000420453 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
LINC00993-201ENST00000420453 FBXO31Q5XUX0 539 aaPredicted RBP8.39□□□□□ -1.07
LINC00993-201ENST00000420453 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
LINC00993-201ENST00000420453 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
LINC00993-201ENST00000420453 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
LINC00993-201ENST00000420453 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
LINC00993-201ENST00000420453 MRGPRX2Q96LB1 330 aa8.38□□□□□ -1.07
LINC00993-201ENST00000420453 POLR3EQ9NVU0 708 aa8.38□□□□□ -1.07
LINC00993-201ENST00000420453 POTECB2RU33 542 aa8.37□□□□□ -1.07
LINC00993-201ENST00000420453 WNT7BP56706 349 aa8.37□□□□□ -1.07
LINC00993-201ENST00000420453 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
LINC00993-201ENST00000420453 CFTRP13569 1480 aa8.37□□□□□ -1.07
LINC00993-201ENST00000420453 CADPSQ9ULU8 1353 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms