RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
CRTC3-202ENST00000420329 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
CRTC3-202ENST00000420329 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
CRTC3-202ENST00000420329 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
CRTC3-202ENST00000420329 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.83
CRTC3-202ENST00000420329 C1orf115Q9H7X2 142 aa20.2■□□□□ 0.83
CRTC3-202ENST00000420329 DIAPH3Q9NSV4 1193 aa20.2■□□□□ 0.82
CRTC3-202ENST00000420329 ATF7IPQ6VMQ6 1270 aa20.19■□□□□ 0.82
CRTC3-202ENST00000420329 ZNF330Q9Y3S2 320 aaPredicted RBP20.19■□□□□ 0.82
CRTC3-202ENST00000420329 PLB1Q6P1J6 1458 aa20.19■□□□□ 0.82
CRTC3-202ENST00000420329 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
CRTC3-202ENST00000420329 CCDC141Q6ZP82 1450 aa20.18■□□□□ 0.82
CRTC3-202ENST00000420329 GORABQ5T7V8 394 aa20.17■□□□□ 0.82
CRTC3-202ENST00000420329 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
CRTC3-202ENST00000420329 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
CRTC3-202ENST00000420329 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
CRTC3-202ENST00000420329 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
CRTC3-202ENST00000420329 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
CRTC3-202ENST00000420329 GCC1Q96CN9 775 aa20.16■□□□□ 0.82
CRTC3-202ENST00000420329 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
CRTC3-202ENST00000420329 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
CRTC3-202ENST00000420329 TEFQ10587 303 aa20.15■□□□□ 0.82
CRTC3-202ENST00000420329 TWISTNBQ3B726 338 aaPredicted RBP20.14■□□□□ 0.82
CRTC3-202ENST00000420329 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.81
CRTC3-202ENST00000420329 RUFY2Q8WXA3 655 aa20.14■□□□□ 0.81
CRTC3-202ENST00000420329 TPM4P67936 248 aa20.14■□□□□ 0.81
CRTC3-202ENST00000420329 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
CRTC3-202ENST00000420329 MCM4P33991 863 aa20.13■□□□□ 0.81
CRTC3-202ENST00000420329 FAM13BQ9NYF5 915 aa20.13■□□□□ 0.81
CRTC3-202ENST00000420329 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
CRTC3-202ENST00000420329 KIF3AQ9Y496 699 aa20.13■□□□□ 0.81
CRTC3-202ENST00000420329 CAVIN1Q6NZI2 390 aaKnown RBP20.12■□□□□ 0.81
CRTC3-202ENST00000420329 H3BQV1 296 aa20.12■□□□□ 0.81
CRTC3-202ENST00000420329 IFFO2Q5TF58 517 aa20.12■□□□□ 0.81
CRTC3-202ENST00000420329 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
CRTC3-202ENST00000420329 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
CRTC3-202ENST00000420329 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
CRTC3-202ENST00000420329 RABEP1Q15276 862 aa20.11■□□□□ 0.81
CRTC3-202ENST00000420329 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
CRTC3-202ENST00000420329 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
CRTC3-202ENST00000420329 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
CRTC3-202ENST00000420329 FAM184AQ8NB25 1140 aa20.1■□□□□ 0.81
CRTC3-202ENST00000420329 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
CRTC3-202ENST00000420329 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
CRTC3-202ENST00000420329 DISP3Q9P2K9 1392 aa20.09■□□□□ 0.81
CRTC3-202ENST00000420329 RNF214Q8ND24 703 aa20.09■□□□□ 0.81
CRTC3-202ENST00000420329 LRPPRCP42704 1394 aaKnown RBP20.09■□□□□ 0.81
CRTC3-202ENST00000420329 SMC3Q9UQE7 1217 aa20.09■□□□□ 0.81
CRTC3-202ENST00000420329 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
CRTC3-202ENST00000420329 URB2Q14146 1524 aaKnown RBP20.09■□□□□ 0.81
CRTC3-202ENST00000420329 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
CRTC3-202ENST00000420329 TAF7LQ5H9L4 462 aa20.09■□□□□ 0.81
CRTC3-202ENST00000420329 VPS37CA5D8V6 355 aaPredicted RBP20.08■□□□□ 0.81
CRTC3-202ENST00000420329 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
CRTC3-202ENST00000420329 NEK4P51957 841 aa20.08■□□□□ 0.8
CRTC3-202ENST00000420329 GOLGA6L19H0YKK7 550 aa20.08■□□□□ 0.8
CRTC3-202ENST00000420329 NPHP1O15259 732 aa20.08■□□□□ 0.8
CRTC3-202ENST00000420329 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
CRTC3-202ENST00000420329 K7ELQ4 463 aaPredicted RBP20.07■□□□□ 0.8
CRTC3-202ENST00000420329 CABP1Q9NZU7 370 aa20.07■□□□□ 0.8
CRTC3-202ENST00000420329 PRPF40AO75400 957 aaKnown RBP20.06■□□□□ 0.8
CRTC3-202ENST00000420329 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
CRTC3-202ENST00000420329 GRPEL1Q9HAV7 217 aa20.06■□□□□ 0.8
CRTC3-202ENST00000420329 BECN2A8MW95 431 aa20.06■□□□□ 0.8
CRTC3-202ENST00000420329 TMPOP42166 694 aaKnown RBP20.06■□□□□ 0.8
CRTC3-202ENST00000420329 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
CRTC3-202ENST00000420329 ISY1Q9ULR0 285 aaKnown RBP20.04■□□□□ 0.8
CRTC3-202ENST00000420329 R3HCC1Q9Y3T6 440 aaKnown RBP20.04■□□□□ 0.8
CRTC3-202ENST00000420329 UBTFL1P0CB47 393 aaPredicted RBP20.04■□□□□ 0.8
CRTC3-202ENST00000420329 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
CRTC3-202ENST00000420329 KIF14Q15058 1648 aa20.03■□□□□ 0.8
CRTC3-202ENST00000420329 MBD3O95983 291 aa20.03■□□□□ 0.8
CRTC3-202ENST00000420329 NEXNQ0ZGT2 675 aa20.03■□□□□ 0.8
CRTC3-202ENST00000420329 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
CRTC3-202ENST00000420329 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
CRTC3-202ENST00000420329 GNAI3P08754 354 aa20.02■□□□□ 0.8
CRTC3-202ENST00000420329 CCDC173Q0VFZ6 552 aa20.02■□□□□ 0.8
CRTC3-202ENST00000420329 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
CRTC3-202ENST00000420329 CIZ1Q9ULV3 898 aaPredicted RBP20.02■□□□□ 0.8
CRTC3-202ENST00000420329 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
CRTC3-202ENST00000420329 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
CRTC3-202ENST00000420329 OSCARQ8IYS5 282 aa20.01■□□□□ 0.79
CRTC3-202ENST00000420329 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
CRTC3-202ENST00000420329 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
CRTC3-202ENST00000420329 GPATCH8Q9UKJ3 1502 aaKnown RBP20.01■□□□□ 0.79
CRTC3-202ENST00000420329 TULP1O00294 542 aaPredicted RBP20.01■□□□□ 0.79
CRTC3-202ENST00000420329 RNF20Q5VTR2 975 aa20.01■□□□□ 0.79
CRTC3-202ENST00000420329 CFAP43Q8NDM7 1665 aa20■□□□□ 0.79
CRTC3-202ENST00000420329 CCDC39Q9UFE4 941 aa20■□□□□ 0.79
CRTC3-202ENST00000420329 ERC2O15083 957 aa20■□□□□ 0.79
CRTC3-202ENST00000420329 G3BP1Q13283 466 aaKnown RBP eCLIP20■□□□□ 0.79
CRTC3-202ENST00000420329 IGHDP01880 384 aa19.99■□□□□ 0.79
CRTC3-202ENST00000420329 TBC1D2Q9BYX2 928 aa19.99■□□□□ 0.79
CRTC3-202ENST00000420329 MCM2P49736 904 aa19.99■□□□□ 0.79
CRTC3-202ENST00000420329 AMER1Q5JTC6 1135 aaPredicted RBP19.99■□□□□ 0.79
CRTC3-202ENST00000420329 CCDC34Q96HJ3 373 aa19.99■□□□□ 0.79
CRTC3-202ENST00000420329 SLC4A2P04920 1241 aa19.99■□□□□ 0.79
CRTC3-202ENST00000420329 SURF6O75683 361 aaKnown RBP19.99■□□□□ 0.79
CRTC3-202ENST00000420329 FCHSD2O94868 740 aa19.99■□□□□ 0.79
CRTC3-202ENST00000420329 SULT6B1Q6IMI4 303 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms