RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 TONSLQ96HA7 1378 aa23.87■■□□□ 1.41
SEC22C-206ENST00000420163 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
SEC22C-206ENST00000420163 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
SEC22C-206ENST00000420163 SIRT1Q96EB6 747 aa23.85■■□□□ 1.41
SEC22C-206ENST00000420163 PRAM1Q96QH2 718 aa23.84■■□□□ 1.41
SEC22C-206ENST00000420163 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
SEC22C-206ENST00000420163 SAFB2Q14151 953 aaKnown RBP eCLIP23.82■■□□□ 1.4
SEC22C-206ENST00000420163 NBPF8Q3BBV2 869 aa23.82■■□□□ 1.4
SEC22C-206ENST00000420163 PHLPP1O60346 1717 aa23.81■■□□□ 1.4
SEC22C-206ENST00000420163 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
SEC22C-206ENST00000420163 ADGRB2O60241 1585 aa23.8■■□□□ 1.4
SEC22C-206ENST00000420163 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
SEC22C-206ENST00000420163 NHSL1Q5SYE7 1610 aa23.78■■□□□ 1.4
SEC22C-206ENST00000420163 BRINP3Q76B58 766 aa23.78■■□□□ 1.4
SEC22C-206ENST00000420163 POGKQ9P215 609 aa23.78■■□□□ 1.4
SEC22C-206ENST00000420163 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
SEC22C-206ENST00000420163 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
SEC22C-206ENST00000420163 COL16A1Q07092 1604 aaPredicted RBP23.77■■□□□ 1.4
SEC22C-206ENST00000420163 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
SEC22C-206ENST00000420163 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
SEC22C-206ENST00000420163 MINK1Q8N4C8 1332 aaPredicted RBP23.74■■□□□ 1.39
SEC22C-206ENST00000420163 RALGAPBQ86X10 1494 aa23.74■■□□□ 1.39
SEC22C-206ENST00000420163 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
SEC22C-206ENST00000420163 ROCK2O75116 1388 aaKnown RBP23.73■■□□□ 1.39
SEC22C-206ENST00000420163 NUTM2FA1L443 756 aa23.72■■□□□ 1.39
SEC22C-206ENST00000420163 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
SEC22C-206ENST00000420163 HIRIP3Q9BW71 556 aaPredicted RBP23.72■■□□□ 1.39
SEC22C-206ENST00000420163 GPRASP1Q5JY77 1395 aa23.71■■□□□ 1.39
SEC22C-206ENST00000420163 DDX17Q92841 729 aaKnown RBP23.69■■□□□ 1.38
SEC22C-206ENST00000420163 KIF1AQ12756 1690 aa23.66■■□□□ 1.38
SEC22C-206ENST00000420163 TULP4Q9NRJ4 1543 aa23.65■■□□□ 1.38
SEC22C-206ENST00000420163 CENPJQ9HC77 1338 aaPredicted RBP23.64■■□□□ 1.38
SEC22C-206ENST00000420163 ESCO1Q5FWF5 840 aa23.64■■□□□ 1.37
SEC22C-206ENST00000420163 ANKARQ7Z5J8 1434 aa23.63■■□□□ 1.37
SEC22C-206ENST00000420163 SHPRHQ149N8 1683 aa23.63■■□□□ 1.37
SEC22C-206ENST00000420163 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
SEC22C-206ENST00000420163 MED1Q15648 1581 aaPredicted RBP23.62■■□□□ 1.37
SEC22C-206ENST00000420163 WASLO00401 505 aaPredicted RBP23.62■■□□□ 1.37
SEC22C-206ENST00000420163 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
SEC22C-206ENST00000420163 ITSN1Q15811 1721 aa23.61■■□□□ 1.37
SEC22C-206ENST00000420163 TOPAZ1Q8N9V7 1692 aa23.6■■□□□ 1.37
SEC22C-206ENST00000420163 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
SEC22C-206ENST00000420163 ATP7BP35670 1465 aa23.6■■□□□ 1.37
SEC22C-206ENST00000420163 PXDNQ92626 1479 aa23.59■■□□□ 1.37
SEC22C-206ENST00000420163 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
SEC22C-206ENST00000420163 JCADQ9P266 1359 aa23.57■■□□□ 1.36
SEC22C-206ENST00000420163 SOS2Q07890 1332 aaPredicted RBP23.57■■□□□ 1.36
SEC22C-206ENST00000420163 FOXO3O43524 673 aa23.56■■□□□ 1.36
SEC22C-206ENST00000420163 CDK19Q9BWU1 502 aa23.56■■□□□ 1.36
SEC22C-206ENST00000420163 XPCQ01831 940 aaPredicted RBP23.55■■□□□ 1.36
SEC22C-206ENST00000420163 PHF8Q9UPP1 1060 aa23.55■■□□□ 1.36
SEC22C-206ENST00000420163 NPHP3Q7Z494 1330 aa23.54■■□□□ 1.36
SEC22C-206ENST00000420163 PMFBP1Q8TBY8 1022 aa23.52■■□□□ 1.36
SEC22C-206ENST00000420163 NUDT16Q96DE0 195 aaKnown RBP23.52■■□□□ 1.36
SEC22C-206ENST00000420163 LRP6O75581 1613 aa23.51■■□□□ 1.35
SEC22C-206ENST00000420163 PNPLA6Q8IY17 1366 aa23.51■■□□□ 1.35
SEC22C-206ENST00000420163 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
SEC22C-206ENST00000420163 LRRC59Q96AG4 307 aaKnown RBP23.5■■□□□ 1.35
SEC22C-206ENST00000420163 SBNO2Q9Y2G9 1366 aa23.49■■□□□ 1.35
SEC22C-206ENST00000420163 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
SEC22C-206ENST00000420163 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
SEC22C-206ENST00000420163 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
SEC22C-206ENST00000420163 KRT28Q7Z3Y7 464 aa23.46■■□□□ 1.35
SEC22C-206ENST00000420163 DISP3Q9P2K9 1392 aa23.46■■□□□ 1.35
SEC22C-206ENST00000420163 USP47Q96K76 1375 aa23.45■■□□□ 1.34
SEC22C-206ENST00000420163 EVC2Q86UK5 1308 aa23.45■■□□□ 1.34
SEC22C-206ENST00000420163 SPATA31A6Q5VVP1 1343 aa23.44■■□□□ 1.34
SEC22C-206ENST00000420163 ALS2Q96Q42 1657 aa23.44■■□□□ 1.34
SEC22C-206ENST00000420163 ST20-MTHFSA0A0A6YYL1 179 aa23.43■■□□□ 1.34
SEC22C-206ENST00000420163 CCDC61Q9Y6R9 512 aa23.43■■□□□ 1.34
SEC22C-206ENST00000420163 PPIP5K1Q6PFW1 1433 aa23.42■■□□□ 1.34
SEC22C-206ENST00000420163 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
SEC22C-206ENST00000420163 SPATA31A3Q5VYP0 1347 aa23.41■■□□□ 1.34
SEC22C-206ENST00000420163 PSME1Q06323 249 aa23.41■■□□□ 1.34
SEC22C-206ENST00000420163 TESK2Q96S53 571 aa23.41■■□□□ 1.34
SEC22C-206ENST00000420163 POLR3AO14802 1390 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-206ENST00000420163 ABCA3Q99758 1704 aa23.4■■□□□ 1.34
SEC22C-206ENST00000420163 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-206ENST00000420163 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-206ENST00000420163 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-206ENST00000420163 NGDNQ8NEJ9 315 aaKnown RBP23.4■■□□□ 1.34
SEC22C-206ENST00000420163 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
SEC22C-206ENST00000420163 PLEKHG3A1L390 1219 aa23.39■■□□□ 1.33
SEC22C-206ENST00000420163 ACEP12821 1306 aa23.38■■□□□ 1.33
SEC22C-206ENST00000420163 AKAP12Q02952 1782 aa23.38■■□□□ 1.33
SEC22C-206ENST00000420163 MARF1Q9Y4F3 1742 aaKnown RBP23.37■■□□□ 1.33
SEC22C-206ENST00000420163 CRYBG1Q9Y4K1 1723 aa23.36■■□□□ 1.33
SEC22C-206ENST00000420163 CABP1Q9NZU7 370 aa23.35■■□□□ 1.33
SEC22C-206ENST00000420163 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
SEC22C-206ENST00000420163 ATAD2Q6PL18 1390 aa23.33■■□□□ 1.33
SEC22C-206ENST00000420163 RGS17Q9UGC6 210 aaPredicted RBP23.33■■□□□ 1.33
SEC22C-206ENST00000420163 MON2Q7Z3U7 1717 aa23.32■■□□□ 1.32
SEC22C-206ENST00000420163 ARHGEF10O15013 1369 aa23.31■■□□□ 1.32
SEC22C-206ENST00000420163 MEX3CQ5U5Q3 659 aaKnown RBP23.31■■□□□ 1.32
SEC22C-206ENST00000420163 LMOD2Q6P5Q4 547 aa23.31■■□□□ 1.32
SEC22C-206ENST00000420163 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
SEC22C-206ENST00000420163 PLEKHG5O94827 1062 aa23.3■■□□□ 1.32
SEC22C-206ENST00000420163 NRKQ7Z2Y5 1582 aa23.3■■□□□ 1.32
SEC22C-206ENST00000420163 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
SEC22C-206ENST00000420163 USP6P35125 1406 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms