RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
RAPGEF1-205ENST00000419442 RALGAPBQ86X10 1494 aa16.39■□□□□ 0.21
RAPGEF1-205ENST00000419442 SLIT2O94813 1529 aa16.39■□□□□ 0.21
RAPGEF1-205ENST00000419442 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
RAPGEF1-205ENST00000419442 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
RAPGEF1-205ENST00000419442 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
RAPGEF1-205ENST00000419442 ROCK1Q13464 1354 aa16.35■□□□□ 0.21
RAPGEF1-205ENST00000419442 UNC5CLQ8IV45 518 aa16.34■□□□□ 0.21
RAPGEF1-205ENST00000419442 APLP2Q06481 763 aa16.33■□□□□ 0.2
RAPGEF1-205ENST00000419442 NUP155O75694 1391 aa16.33■□□□□ 0.2
RAPGEF1-205ENST00000419442 CLTCL1P53675 1640 aa16.33■□□□□ 0.2
RAPGEF1-205ENST00000419442 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
RAPGEF1-205ENST00000419442 KIF1BO60333 1816 aa16.32■□□□□ 0.2
RAPGEF1-205ENST00000419442 HRCP23327 699 aa16.32■□□□□ 0.2
RAPGEF1-205ENST00000419442 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
RAPGEF1-205ENST00000419442 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-205ENST00000419442 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-205ENST00000419442 ZNF326Q5BKZ1 582 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-205ENST00000419442 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
RAPGEF1-205ENST00000419442 ONECUT3O60422 494 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-205ENST00000419442 PLCH1Q4KWH8 1693 aa16.28■□□□□ 0.2
RAPGEF1-205ENST00000419442 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
RAPGEF1-205ENST00000419442 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
RAPGEF1-205ENST00000419442 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
RAPGEF1-205ENST00000419442 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
RAPGEF1-205ENST00000419442 RGPD1P0DJD0 1748 aa16.26■□□□□ 0.19
RAPGEF1-205ENST00000419442 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
RAPGEF1-205ENST00000419442 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
RAPGEF1-205ENST00000419442 FOXO3O43524 673 aa16.25■□□□□ 0.19
RAPGEF1-205ENST00000419442 VPS72Q15906 364 aa16.25■□□□□ 0.19
RAPGEF1-205ENST00000419442 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
RAPGEF1-205ENST00000419442 SPATA31A3Q5VYP0 1347 aa16.24■□□□□ 0.19
RAPGEF1-205ENST00000419442 BAG6P46379 1132 aa16.24■□□□□ 0.19
RAPGEF1-205ENST00000419442 XPCQ01831 940 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF1-205ENST00000419442 KRT27Q7Z3Y8 459 aa16.23■□□□□ 0.19
RAPGEF1-205ENST00000419442 PPLO60437 1756 aa16.23■□□□□ 0.19
RAPGEF1-205ENST00000419442 FMN2Q9NZ56 1722 aa16.22■□□□□ 0.19
RAPGEF1-205ENST00000419442 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-205ENST00000419442 DISP2A7MBM2 1401 aa16.21■□□□□ 0.19
RAPGEF1-205ENST00000419442 NAIPQ13075 1403 aa16.21■□□□□ 0.19
RAPGEF1-205ENST00000419442 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
RAPGEF1-205ENST00000419442 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
RAPGEF1-205ENST00000419442 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
RAPGEF1-205ENST00000419442 TECPR2O15040 1411 aa16.19■□□□□ 0.18
RAPGEF1-205ENST00000419442 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
RAPGEF1-205ENST00000419442 TNS3Q68CZ2 1445 aa16.17■□□□□ 0.18
RAPGEF1-205ENST00000419442 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
RAPGEF1-205ENST00000419442 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
RAPGEF1-205ENST00000419442 RGPD8O14715 1765 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF1-205ENST00000419442 YY1P25490 414 aa16.15■□□□□ 0.18
RAPGEF1-205ENST00000419442 EN1Q05925 392 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF1-205ENST00000419442 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.17
RAPGEF1-205ENST00000419442 IFT172Q9UG01 1749 aa16.14■□□□□ 0.17
RAPGEF1-205ENST00000419442 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
RAPGEF1-205ENST00000419442 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
RAPGEF1-205ENST00000419442 ADGRB2O60241 1585 aa16.12■□□□□ 0.17
RAPGEF1-205ENST00000419442 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
RAPGEF1-205ENST00000419442 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
RAPGEF1-205ENST00000419442 RREB1Q92766 1687 aa16.11■□□□□ 0.17
RAPGEF1-205ENST00000419442 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
RAPGEF1-205ENST00000419442 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
RAPGEF1-205ENST00000419442 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
RAPGEF1-205ENST00000419442 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
RAPGEF1-205ENST00000419442 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
RAPGEF1-205ENST00000419442 FAM98CQ17RN3 349 aaKnown RBP16.09■□□□□ 0.17
RAPGEF1-205ENST00000419442 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
RAPGEF1-205ENST00000419442 ARHGEF10O15013 1369 aa16.09■□□□□ 0.17
RAPGEF1-205ENST00000419442 PLEKHH1Q9ULM0 1364 aa16.09■□□□□ 0.17
RAPGEF1-205ENST00000419442 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF1-205ENST00000419442 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.16
RAPGEF1-205ENST00000419442 PSME1Q06323 249 aa16.07■□□□□ 0.16
RAPGEF1-205ENST00000419442 EZH2Q15910 746 aaKnown RBP16.07■□□□□ 0.16
RAPGEF1-205ENST00000419442 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
RAPGEF1-205ENST00000419442 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
RAPGEF1-205ENST00000419442 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF1-205ENST00000419442 A0A0G2JS52 829 aa16.06■□□□□ 0.16
RAPGEF1-205ENST00000419442 MYT1Q01538 1121 aa16.06■□□□□ 0.16
RAPGEF1-205ENST00000419442 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
RAPGEF1-205ENST00000419442 CRYBG1Q9Y4K1 1723 aa16.05■□□□□ 0.16
RAPGEF1-205ENST00000419442 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
RAPGEF1-205ENST00000419442 RRBP1Q9P2E9 1410 aaKnown RBP16.05■□□□□ 0.16
RAPGEF1-205ENST00000419442 SPATA31A5Q5VU36 1347 aa16.04■□□□□ 0.16
RAPGEF1-205ENST00000419442 SPATA31A7Q8IWB4 1347 aa16.04■□□□□ 0.16
RAPGEF1-205ENST00000419442 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
RAPGEF1-205ENST00000419442 ADGRF5Q8IZF2 1346 aa16.03■□□□□ 0.16
RAPGEF1-205ENST00000419442 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
RAPGEF1-205ENST00000419442 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
RAPGEF1-205ENST00000419442 STK26Q9P289 416 aa16.03■□□□□ 0.16
RAPGEF1-205ENST00000419442 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
RAPGEF1-205ENST00000419442 ITGAEP38570 1179 aa16.01■□□□□ 0.15
RAPGEF1-205ENST00000419442 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-205ENST00000419442 PIK3C2GO75747 1445 aa15.99■□□□□ 0.15
RAPGEF1-205ENST00000419442 CAMTA1Q9Y6Y1 1673 aa15.99■□□□□ 0.15
RAPGEF1-205ENST00000419442 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
RAPGEF1-205ENST00000419442 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
RAPGEF1-205ENST00000419442 SPATA31E1Q6ZUB1 1445 aa15.98■□□□□ 0.15
RAPGEF1-205ENST00000419442 ANKARQ7Z5J8 1434 aa15.98■□□□□ 0.15
RAPGEF1-205ENST00000419442 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
RAPGEF1-205ENST00000419442 TRIM37O94972 964 aa15.97■□□□□ 0.15
RAPGEF1-205ENST00000419442 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms