RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 DDX17Q92841 729 aaKnown RBP17.17■□□□□ 0.34
THUMPD3-204ENST00000419437 C8orf37Q96NL8 207 aa17.17■□□□□ 0.34
THUMPD3-204ENST00000419437 SOS2Q07890 1332 aaPredicted RBP17.17■□□□□ 0.34
THUMPD3-204ENST00000419437 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
THUMPD3-204ENST00000419437 QTRT2Q9H974 415 aaKnown RBP17.16■□□□□ 0.34
THUMPD3-204ENST00000419437 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
THUMPD3-204ENST00000419437 RGS12O14924 1447 aa17.15■□□□□ 0.34
THUMPD3-204ENST00000419437 STK26Q9P289 416 aa17.14■□□□□ 0.33
THUMPD3-204ENST00000419437 CDC42BPGQ6DT37 1551 aa17.14■□□□□ 0.33
THUMPD3-204ENST00000419437 TMEM132EQ6IEE7 984 aa17.13■□□□□ 0.33
THUMPD3-204ENST00000419437 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
THUMPD3-204ENST00000419437 ORAI2Q96SN7 254 aa17.12■□□□□ 0.33
THUMPD3-204ENST00000419437 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
THUMPD3-204ENST00000419437 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
THUMPD3-204ENST00000419437 DCAF11Q8TEB1 546 aa17.1■□□□□ 0.33
THUMPD3-204ENST00000419437 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
THUMPD3-204ENST00000419437 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
THUMPD3-204ENST00000419437 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
THUMPD3-204ENST00000419437 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
THUMPD3-204ENST00000419437 TECPR2O15040 1411 aa17.08■□□□□ 0.32
THUMPD3-204ENST00000419437 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
THUMPD3-204ENST00000419437 C14orf93Q9H972 538 aaKnown RBP17.08■□□□□ 0.32
THUMPD3-204ENST00000419437 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 MYOM2P54296 1465 aa17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 PXDNQ92626 1479 aa17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 WAPLQ7Z5K2 1190 aa17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 USP21Q9UK80 565 aa17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
THUMPD3-204ENST00000419437 ATRNO75882 1429 aa17.05■□□□□ 0.32
THUMPD3-204ENST00000419437 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
THUMPD3-204ENST00000419437 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
THUMPD3-204ENST00000419437 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
THUMPD3-204ENST00000419437 ABCC11Q96J66 1382 aa17.02■□□□□ 0.32
THUMPD3-204ENST00000419437 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
THUMPD3-204ENST00000419437 KIF1AQ12756 1690 aa17.02■□□□□ 0.32
THUMPD3-204ENST00000419437 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.31
THUMPD3-204ENST00000419437 FMN2Q9NZ56 1722 aa17.01■□□□□ 0.31
THUMPD3-204ENST00000419437 BCL9LQ86UU0 1499 aa17.01■□□□□ 0.31
THUMPD3-204ENST00000419437 STAC3Q96MF2 364 aa17■□□□□ 0.31
THUMPD3-204ENST00000419437 YTHDC2Q9H6S0 1430 aaKnown RBP17■□□□□ 0.31
THUMPD3-204ENST00000419437 NUTM2FA1L443 756 aa16.99■□□□□ 0.31
THUMPD3-204ENST00000419437 FOXO3O43524 673 aa16.99■□□□□ 0.31
THUMPD3-204ENST00000419437 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
THUMPD3-204ENST00000419437 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
THUMPD3-204ENST00000419437 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
THUMPD3-204ENST00000419437 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
THUMPD3-204ENST00000419437 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
THUMPD3-204ENST00000419437 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
THUMPD3-204ENST00000419437 POGKQ9P215 609 aa16.97■□□□□ 0.31
THUMPD3-204ENST00000419437 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
THUMPD3-204ENST00000419437 PRAM1Q96QH2 718 aa16.96■□□□□ 0.31
THUMPD3-204ENST00000419437 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
THUMPD3-204ENST00000419437 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
THUMPD3-204ENST00000419437 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
THUMPD3-204ENST00000419437 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
THUMPD3-204ENST00000419437 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
THUMPD3-204ENST00000419437 USP32Q8NFA0 1604 aa16.94■□□□□ 0.3
THUMPD3-204ENST00000419437 SLIT2O94813 1529 aa16.94■□□□□ 0.3
THUMPD3-204ENST00000419437 RGPD8O14715 1765 aaPredicted RBP16.94■□□□□ 0.3
THUMPD3-204ENST00000419437 NWD2Q9ULI1 1742 aa16.91■□□□□ 0.3
THUMPD3-204ENST00000419437 GLI3P10071 1580 aa16.91■□□□□ 0.3
THUMPD3-204ENST00000419437 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
THUMPD3-204ENST00000419437 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
THUMPD3-204ENST00000419437 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
THUMPD3-204ENST00000419437 RALGAPBQ86X10 1494 aa16.9■□□□□ 0.3
THUMPD3-204ENST00000419437 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
THUMPD3-204ENST00000419437 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.29
THUMPD3-204ENST00000419437 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.29
THUMPD3-204ENST00000419437 ABCA3Q99758 1704 aa16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 PSME1Q06323 249 aa16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 BRWD3Q6RI45 1802 aa16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
THUMPD3-204ENST00000419437 DLC1Q96QB1 1528 aa16.87■□□□□ 0.29
THUMPD3-204ENST00000419437 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
THUMPD3-204ENST00000419437 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
THUMPD3-204ENST00000419437 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
THUMPD3-204ENST00000419437 ADGRB2O60241 1585 aa16.86■□□□□ 0.29
THUMPD3-204ENST00000419437 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
THUMPD3-204ENST00000419437 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
THUMPD3-204ENST00000419437 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
THUMPD3-204ENST00000419437 VPS72Q15906 364 aa16.83■□□□□ 0.28
THUMPD3-204ENST00000419437 ONECUT3O60422 494 aaPredicted RBP16.82■□□□□ 0.28
THUMPD3-204ENST00000419437 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
THUMPD3-204ENST00000419437 TRPM3Q9HCF6 1732 aaPredicted RBP16.82■□□□□ 0.28
THUMPD3-204ENST00000419437 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
THUMPD3-204ENST00000419437 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
THUMPD3-204ENST00000419437 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
THUMPD3-204ENST00000419437 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
THUMPD3-204ENST00000419437 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
THUMPD3-204ENST00000419437 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
THUMPD3-204ENST00000419437 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.28
THUMPD3-204ENST00000419437 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.28
THUMPD3-204ENST00000419437 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
THUMPD3-204ENST00000419437 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
THUMPD3-204ENST00000419437 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
THUMPD3-204ENST00000419437 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms