RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DLC1Q96QB1 1528 aa30.13■■■□□ 2.41
PKNOX1-202ENST00000418336 KDM2AQ9Y2K7 1162 aa30.13■■■□□ 2.41
PKNOX1-202ENST00000418336 ILDR2Q71H61 639 aa30.07■■■□□ 2.4
PKNOX1-202ENST00000418336 FMN2Q9NZ56 1722 aa30.05■■■□□ 2.4
PKNOX1-202ENST00000418336 SIN3AQ96ST3 1273 aa30.04■■■□□ 2.4
PKNOX1-202ENST00000418336 KIAA1210Q9ULL0 1709 aa30.04■■■□□ 2.4
PKNOX1-202ENST00000418336 JCADQ9P266 1359 aa30.03■■■□□ 2.4
PKNOX1-202ENST00000418336 ORAI2Q96SN7 254 aa30.03■■■□□ 2.4
PKNOX1-202ENST00000418336 SHPRHQ149N8 1683 aa30.03■■■□□ 2.4
PKNOX1-202ENST00000418336 DDX17Q92841 729 aaKnown RBP30.02■■■□□ 2.4
PKNOX1-202ENST00000418336 ADGRB2O60241 1585 aa29.99■■■□□ 2.39
PKNOX1-202ENST00000418336 PRAM1Q96QH2 718 aa29.99■■■□□ 2.39
PKNOX1-202ENST00000418336 ARHGEF28Q8N1W1 1705 aaKnown RBP29.98■■■□□ 2.39
PKNOX1-202ENST00000418336 LRP6O75581 1613 aa29.97■■■□□ 2.39
PKNOX1-202ENST00000418336 L3MBTL2Q969R5 705 aa29.97■■■□□ 2.39
PKNOX1-202ENST00000418336 RGS17Q9UGC6 210 aaPredicted RBP29.96■■■□□ 2.39
PKNOX1-202ENST00000418336 TRAK1Q9UPV9 953 aa29.95■■■□□ 2.39
PKNOX1-202ENST00000418336 SOS2Q07890 1332 aaPredicted RBP29.94■■■□□ 2.38
PKNOX1-202ENST00000418336 USP32Q8NFA0 1604 aa29.93■■■□□ 2.38
PKNOX1-202ENST00000418336 NBPF1Q3BBV0 1214 aa29.91■■■□□ 2.38
PKNOX1-202ENST00000418336 PXDNQ92626 1479 aa29.91■■■□□ 2.38
PKNOX1-202ENST00000418336 SAFB2Q14151 953 aaKnown RBP eCLIP29.9■■■□□ 2.38
PKNOX1-202ENST00000418336 RGPD8O14715 1765 aaPredicted RBP29.9■■■□□ 2.38
PKNOX1-202ENST00000418336 SPATA31A6Q5VVP1 1343 aa29.89■■■□□ 2.38
PKNOX1-202ENST00000418336 PNPLA6Q8IY17 1366 aa29.89■■■□□ 2.37
PKNOX1-202ENST00000418336 NUTM2FA1L443 756 aa29.87■■■□□ 2.37
PKNOX1-202ENST00000418336 TRPM1Q7Z4N2 1603 aa29.86■■■□□ 2.37
PKNOX1-202ENST00000418336 ESCO1Q5FWF5 840 aa29.86■■■□□ 2.37
PKNOX1-202ENST00000418336 NEUROD1Q13562 356 aa29.85■■■□□ 2.37
PKNOX1-202ENST00000418336 LRRC59Q96AG4 307 aaKnown RBP29.85■■■□□ 2.37
PKNOX1-202ENST00000418336 POGKQ9P215 609 aa29.85■■■□□ 2.37
PKNOX1-202ENST00000418336 KIF1AQ12756 1690 aa29.85■■■□□ 2.37
PKNOX1-202ENST00000418336 ANKARQ7Z5J8 1434 aa29.83■■■□□ 2.37
PKNOX1-202ENST00000418336 COL22A1Q8NFW1 1626 aaPredicted RBP29.82■■■□□ 2.36
PKNOX1-202ENST00000418336 MINK1Q8N4C8 1332 aaPredicted RBP29.8■■■□□ 2.36
PKNOX1-202ENST00000418336 HIRIP3Q9BW71 556 aaPredicted RBP29.8■■■□□ 2.36
PKNOX1-202ENST00000418336 NPHP3Q7Z494 1330 aa29.79■■■□□ 2.36
PKNOX1-202ENST00000418336 PRR36Q9H6K5 1346 aa29.79■■■□□ 2.36
PKNOX1-202ENST00000418336 FOXO3O43524 673 aa29.79■■■□□ 2.36
PKNOX1-202ENST00000418336 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
PKNOX1-202ENST00000418336 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
PKNOX1-202ENST00000418336 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
PKNOX1-202ENST00000418336 WASLO00401 505 aaPredicted RBP29.76■■■□□ 2.35
PKNOX1-202ENST00000418336 SOCS7O14512 581 aa29.75■■■□□ 2.35
PKNOX1-202ENST00000418336 POTEAQ6S8J7 498 aa29.74■■■□□ 2.35
PKNOX1-202ENST00000418336 XPCQ01831 940 aaPredicted RBP29.73■■■□□ 2.35
PKNOX1-202ENST00000418336 PHF8Q9UPP1 1060 aa29.73■■■□□ 2.35
PKNOX1-202ENST00000418336 ATP7BP35670 1465 aa29.73■■■□□ 2.35
PKNOX1-202ENST00000418336 GPRASP1Q5JY77 1395 aa29.71■■■□□ 2.35
PKNOX1-202ENST00000418336 TOPAZ1Q8N9V7 1692 aa29.69■■■□□ 2.34
PKNOX1-202ENST00000418336 EIF3AQ14152 1382 aaKnown RBP29.67■■■□□ 2.34
PKNOX1-202ENST00000418336 NUTM2BA6NNL0 878 aaPredicted RBP29.67■■■□□ 2.34
PKNOX1-202ENST00000418336 NUTM2EB1AL46 878 aaPredicted RBP29.67■■■□□ 2.34
PKNOX1-202ENST00000418336 NUTM2AQ8IVF1 878 aaPredicted RBP29.67■■■□□ 2.34
PKNOX1-202ENST00000418336 TRPM3Q9HCF6 1732 aaPredicted RBP29.67■■■□□ 2.34
PKNOX1-202ENST00000418336 SPATA31A3Q5VYP0 1347 aa29.67■■■□□ 2.34
PKNOX1-202ENST00000418336 QRICH2Q9H0J4 1663 aa29.66■■■□□ 2.34
PKNOX1-202ENST00000418336 KRT28Q7Z3Y7 464 aa29.65■■■□□ 2.34
PKNOX1-202ENST00000418336 CENPJQ9HC77 1338 aaPredicted RBP29.64■■■□□ 2.34
PKNOX1-202ENST00000418336 PMFBP1Q8TBY8 1022 aa29.63■■■□□ 2.33
PKNOX1-202ENST00000418336 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
PKNOX1-202ENST00000418336 ROCK2O75116 1388 aaKnown RBP29.63■■■□□ 2.33
PKNOX1-202ENST00000418336 TONSLQ96HA7 1378 aa29.63■■■□□ 2.33
PKNOX1-202ENST00000418336 RALGAPBQ86X10 1494 aa29.62■■■□□ 2.33
PKNOX1-202ENST00000418336 SBNO1A3KN83 1393 aa29.62■■■□□ 2.33
PKNOX1-202ENST00000418336 TNS3Q68CZ2 1445 aa29.62■■■□□ 2.33
PKNOX1-202ENST00000418336 ITSN1Q15811 1721 aa29.61■■■□□ 2.33
PKNOX1-202ENST00000418336 MEX3CQ5U5Q3 659 aaKnown RBP29.6■■■□□ 2.33
PKNOX1-202ENST00000418336 NUDT16Q96DE0 195 aaKnown RBP29.6■■■□□ 2.33
PKNOX1-202ENST00000418336 PCGF6Q9BYE7 350 aa29.6■■■□□ 2.33
PKNOX1-202ENST00000418336 ALS2Q96Q42 1657 aa29.59■■■□□ 2.33
PKNOX1-202ENST00000418336 MARF1Q9Y4F3 1742 aaKnown RBP29.57■■■□□ 2.32
PKNOX1-202ENST00000418336 AFF2P51816 1311 aa29.56■■■□□ 2.32
PKNOX1-202ENST00000418336 ABCA3Q99758 1704 aa29.56■■■□□ 2.32
PKNOX1-202ENST00000418336 POLR3AO14802 1390 aaPredicted RBP29.55■■■□□ 2.32
PKNOX1-202ENST00000418336 ADAMTS2O95450 1211 aa29.53■■■□□ 2.32
PKNOX1-202ENST00000418336 PSME1Q06323 249 aa29.53■■■□□ 2.32
PKNOX1-202ENST00000418336 ZNF772Q68DY9 489 aaPredicted RBP29.53■■■□□ 2.32
PKNOX1-202ENST00000418336 C8orf37Q96NL8 207 aa29.52■■■□□ 2.32
PKNOX1-202ENST00000418336 CRYBG1Q9Y4K1 1723 aa29.51■■■□□ 2.32
PKNOX1-202ENST00000418336 PLEKHG3A1L390 1219 aa29.51■■■□□ 2.31
PKNOX1-202ENST00000418336 FNBP4Q8N3X1 1017 aaPredicted RBP29.49■■■□□ 2.31
PKNOX1-202ENST00000418336 CCDC61Q9Y6R9 512 aa29.49■■■□□ 2.31
PKNOX1-202ENST00000418336 CABP2Q9NPB3 220 aa29.48■■■□□ 2.31
PKNOX1-202ENST00000418336 ARHGEF10O15013 1369 aa29.48■■■□□ 2.31
PKNOX1-202ENST00000418336 CLSPNQ9HAW4 1339 aa29.47■■■□□ 2.31
PKNOX1-202ENST00000418336 SBNO2Q9Y2G9 1366 aa29.47■■■□□ 2.31
PKNOX1-202ENST00000418336 ACEP12821 1306 aa29.45■■■□□ 2.31
PKNOX1-202ENST00000418336 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
PKNOX1-202ENST00000418336 CARD11Q9BXL7 1154 aa29.45■■■□□ 2.31
PKNOX1-202ENST00000418336 NGDNQ8NEJ9 315 aaKnown RBP29.44■■■□□ 2.3
PKNOX1-202ENST00000418336 CABLES1Q8TDN4 633 aa29.44■■■□□ 2.3
PKNOX1-202ENST00000418336 PPIP5K1Q6PFW1 1433 aa29.44■■■□□ 2.3
PKNOX1-202ENST00000418336 NGLY1Q96IV0 654 aa29.43■■■□□ 2.3
PKNOX1-202ENST00000418336 SLIT2O94813 1529 aa29.43■■■□□ 2.3
PKNOX1-202ENST00000418336 SRPK2P78362 688 aaKnown RBP29.42■■■□□ 2.3
PKNOX1-202ENST00000418336 ATRNO75882 1429 aa29.4■■■□□ 2.3
PKNOX1-202ENST00000418336 EVC2Q86UK5 1308 aa29.4■■■□□ 2.3
PKNOX1-202ENST00000418336 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.4■■■□□ 2.3
PKNOX1-202ENST00000418336 CDK12Q9NYV4 1490 aaPredicted RBP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms