RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 ORAI2Q96SN7 254 aa23.8■■□□□ 1.4
DDR1-231ENST00000417521 COL16A1Q07092 1604 aaPredicted RBP23.79■■□□□ 1.4
DDR1-231ENST00000417521 SPATA31A6Q5VVP1 1343 aa23.78■■□□□ 1.4
DDR1-231ENST00000417521 LRRC59Q96AG4 307 aaKnown RBP23.78■■□□□ 1.4
DDR1-231ENST00000417521 LAMC1P11047 1609 aa23.76■■□□□ 1.39
DDR1-231ENST00000417521 DDX17Q92841 729 aaKnown RBP23.75■■□□□ 1.39
DDR1-231ENST00000417521 PRAM1Q96QH2 718 aa23.75■■□□□ 1.39
DDR1-231ENST00000417521 CDC42BPGQ6DT37 1551 aa23.74■■□□□ 1.39
DDR1-231ENST00000417521 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
DDR1-231ENST00000417521 RGS17Q9UGC6 210 aaPredicted RBP23.74■■□□□ 1.39
DDR1-231ENST00000417521 ADGRB1O14514 1584 aa23.73■■□□□ 1.39
DDR1-231ENST00000417521 POGKQ9P215 609 aa23.73■■□□□ 1.39
DDR1-231ENST00000417521 KNDC1Q76NI1 1749 aa23.72■■□□□ 1.39
DDR1-231ENST00000417521 TRAK1Q9UPV9 953 aa23.72■■□□□ 1.39
DDR1-231ENST00000417521 SOS2Q07890 1332 aaPredicted RBP23.71■■□□□ 1.39
DDR1-231ENST00000417521 DLC1Q96QB1 1528 aa23.7■■□□□ 1.39
DDR1-231ENST00000417521 NUTM2FA1L443 756 aa23.69■■□□□ 1.38
DDR1-231ENST00000417521 SAFB2Q14151 953 aaKnown RBP eCLIP23.69■■□□□ 1.38
DDR1-231ENST00000417521 NPHP3Q7Z494 1330 aa23.68■■□□□ 1.38
DDR1-231ENST00000417521 NHSL1Q5SYE7 1610 aa23.67■■□□□ 1.38
DDR1-231ENST00000417521 SIN3AQ96ST3 1273 aa23.66■■□□□ 1.38
DDR1-231ENST00000417521 FOXO3O43524 673 aa23.65■■□□□ 1.38
DDR1-231ENST00000417521 MEX3CQ5U5Q3 659 aaKnown RBP23.65■■□□□ 1.38
DDR1-231ENST00000417521 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
DDR1-231ENST00000417521 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.38
DDR1-231ENST00000417521 LRP6O75581 1613 aa23.64■■□□□ 1.37
DDR1-231ENST00000417521 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
DDR1-231ENST00000417521 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
DDR1-231ENST00000417521 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
DDR1-231ENST00000417521 SHPRHQ149N8 1683 aa23.62■■□□□ 1.37
DDR1-231ENST00000417521 POTEAQ6S8J7 498 aa23.62■■□□□ 1.37
DDR1-231ENST00000417521 NEUROD1Q13562 356 aa23.61■■□□□ 1.37
DDR1-231ENST00000417521 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
DDR1-231ENST00000417521 HIRIP3Q9BW71 556 aaPredicted RBP23.59■■□□□ 1.37
DDR1-231ENST00000417521 PHF8Q9UPP1 1060 aa23.59■■□□□ 1.37
DDR1-231ENST00000417521 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
DDR1-231ENST00000417521 WASLO00401 505 aaPredicted RBP23.57■■□□□ 1.36
DDR1-231ENST00000417521 ZNF772Q68DY9 489 aaPredicted RBP23.57■■□□□ 1.36
DDR1-231ENST00000417521 ANKARQ7Z5J8 1434 aa23.57■■□□□ 1.36
DDR1-231ENST00000417521 XPCQ01831 940 aaPredicted RBP23.56■■□□□ 1.36
DDR1-231ENST00000417521 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
DDR1-231ENST00000417521 PXDNQ92626 1479 aa23.55■■□□□ 1.36
DDR1-231ENST00000417521 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
DDR1-231ENST00000417521 KRT28Q7Z3Y7 464 aa23.55■■□□□ 1.36
DDR1-231ENST00000417521 ADGRB2O60241 1585 aa23.53■■□□□ 1.36
DDR1-231ENST00000417521 PSME1Q06323 249 aa23.52■■□□□ 1.36
DDR1-231ENST00000417521 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
DDR1-231ENST00000417521 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
DDR1-231ENST00000417521 PRR36Q9H6K5 1346 aa23.5■■□□□ 1.35
DDR1-231ENST00000417521 ADAMTS2O95450 1211 aa23.49■■□□□ 1.35
DDR1-231ENST00000417521 PMFBP1Q8TBY8 1022 aa23.49■■□□□ 1.35
DDR1-231ENST00000417521 C8orf37Q96NL8 207 aa23.49■■□□□ 1.35
DDR1-231ENST00000417521 AFF2P51816 1311 aa23.49■■□□□ 1.35
DDR1-231ENST00000417521 KIF1AQ12756 1690 aa23.47■■□□□ 1.35
DDR1-231ENST00000417521 NGLY1Q96IV0 654 aa23.47■■□□□ 1.35
DDR1-231ENST00000417521 CDK19Q9BWU1 502 aa23.46■■□□□ 1.35
DDR1-231ENST00000417521 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
DDR1-231ENST00000417521 SBNO1A3KN83 1393 aa23.45■■□□□ 1.35
DDR1-231ENST00000417521 NUDT16Q96DE0 195 aaKnown RBP23.45■■□□□ 1.34
DDR1-231ENST00000417521 CENPJQ9HC77 1338 aaPredicted RBP23.45■■□□□ 1.34
DDR1-231ENST00000417521 ARHGEF28Q8N1W1 1705 aaKnown RBP23.42■■□□□ 1.34
DDR1-231ENST00000417521 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
DDR1-231ENST00000417521 COL22A1Q8NFW1 1626 aaPredicted RBP23.42■■□□□ 1.34
DDR1-231ENST00000417521 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
DDR1-231ENST00000417521 RXRBP28702 533 aa23.42■■□□□ 1.34
DDR1-231ENST00000417521 FNBP4Q8N3X1 1017 aaPredicted RBP23.42■■□□□ 1.34
DDR1-231ENST00000417521 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
DDR1-231ENST00000417521 ROCK2O75116 1388 aaKnown RBP23.41■■□□□ 1.34
DDR1-231ENST00000417521 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
DDR1-231ENST00000417521 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
DDR1-231ENST00000417521 CCDC61Q9Y6R9 512 aa23.41■■□□□ 1.34
DDR1-231ENST00000417521 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
DDR1-231ENST00000417521 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
DDR1-231ENST00000417521 ARHGEF10O15013 1369 aa23.4■■□□□ 1.34
DDR1-231ENST00000417521 ATP7BP35670 1465 aa23.39■■□□□ 1.33
DDR1-231ENST00000417521 LMOD2Q6P5Q4 547 aa23.38■■□□□ 1.33
DDR1-231ENST00000417521 USP21Q9UK80 565 aa23.38■■□□□ 1.33
DDR1-231ENST00000417521 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
DDR1-231ENST00000417521 RBM6P78332 1123 aaKnown RBP23.36■■□□□ 1.33
DDR1-231ENST00000417521 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
DDR1-231ENST00000417521 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
DDR1-231ENST00000417521 HAP1P54257 671 aaPredicted RBP23.34■■□□□ 1.33
DDR1-231ENST00000417521 TRPC5Q9UL62 973 aaPredicted RBP23.34■■□□□ 1.33
DDR1-231ENST00000417521 CABLES1Q8TDN4 633 aa23.33■■□□□ 1.33
DDR1-231ENST00000417521 TRPM1Q7Z4N2 1603 aa23.32■■□□□ 1.32
DDR1-231ENST00000417521 CCER1Q8TC90 406 aaPredicted RBP23.32■■□□□ 1.32
DDR1-231ENST00000417521 CABP2Q9NPB3 220 aa23.32■■□□□ 1.32
DDR1-231ENST00000417521 POLR3AO14802 1390 aaPredicted RBP23.32■■□□□ 1.32
DDR1-231ENST00000417521 CARD11Q9BXL7 1154 aa23.31■■□□□ 1.32
DDR1-231ENST00000417521 CDK12Q9NYV4 1490 aaPredicted RBP23.31■■□□□ 1.32
DDR1-231ENST00000417521 ACEP12821 1306 aa23.31■■□□□ 1.32
DDR1-231ENST00000417521 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
DDR1-231ENST00000417521 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
DDR1-231ENST00000417521 BCL9LQ86UU0 1499 aa23.29■■□□□ 1.32
DDR1-231ENST00000417521 PLEKHG5O94827 1062 aa23.28■■□□□ 1.32
DDR1-231ENST00000417521 ATRNO75882 1429 aa23.26■■□□□ 1.31
DDR1-231ENST00000417521 UNC5CLQ8IV45 518 aa23.26■■□□□ 1.31
DDR1-231ENST00000417521 RALGAPBQ86X10 1494 aa23.25■■□□□ 1.31
DDR1-231ENST00000417521 SLIT2O94813 1529 aa23.25■■□□□ 1.31
DDR1-231ENST00000417521 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms