RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 MST1RQ04912 1400 aa15.86■□□□□ 0.13
TM9SF4-203ENST00000417389 KNDC1Q76NI1 1749 aa15.85■□□□□ 0.13
TM9SF4-203ENST00000417389 ESCO1Q5FWF5 840 aa15.85■□□□□ 0.13
TM9SF4-203ENST00000417389 SIRT1Q96EB6 747 aa15.85■□□□□ 0.13
TM9SF4-203ENST00000417389 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
TM9SF4-203ENST00000417389 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
TM9SF4-203ENST00000417389 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.12
TM9SF4-203ENST00000417389 C1orf167Q5SNV9 1468 aa15.83■□□□□ 0.12
TM9SF4-203ENST00000417389 ADGRB1O14514 1584 aa15.83■□□□□ 0.12
TM9SF4-203ENST00000417389 NBPF1Q3BBV0 1214 aa15.82■□□□□ 0.12
TM9SF4-203ENST00000417389 DDX17Q92841 729 aaKnown RBP15.82■□□□□ 0.12
TM9SF4-203ENST00000417389 ORAI2Q96SN7 254 aa15.82■□□□□ 0.12
TM9SF4-203ENST00000417389 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
TM9SF4-203ENST00000417389 CDC42BPGQ6DT37 1551 aa15.8■□□□□ 0.12
TM9SF4-203ENST00000417389 DLC1Q96QB1 1528 aa15.8■□□□□ 0.12
TM9SF4-203ENST00000417389 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
TM9SF4-203ENST00000417389 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
TM9SF4-203ENST00000417389 JCADQ9P266 1359 aa15.78■□□□□ 0.12
TM9SF4-203ENST00000417389 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
TM9SF4-203ENST00000417389 KIAA1210Q9ULL0 1709 aa15.77■□□□□ 0.11
TM9SF4-203ENST00000417389 FOXO3O43524 673 aa15.76■□□□□ 0.11
TM9SF4-203ENST00000417389 XPCQ01831 940 aaPredicted RBP15.76■□□□□ 0.11
TM9SF4-203ENST00000417389 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
TM9SF4-203ENST00000417389 LRRC59Q96AG4 307 aaKnown RBP15.76■□□□□ 0.11
TM9SF4-203ENST00000417389 MED1Q15648 1581 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-203ENST00000417389 NUTM2BA6NNL0 878 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-203ENST00000417389 NUTM2EB1AL46 878 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-203ENST00000417389 NUTM2AQ8IVF1 878 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-203ENST00000417389 COL16A1Q07092 1604 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-203ENST00000417389 NPHP3Q7Z494 1330 aa15.74■□□□□ 0.11
TM9SF4-203ENST00000417389 WASLO00401 505 aaPredicted RBP15.74■□□□□ 0.11
TM9SF4-203ENST00000417389 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
TM9SF4-203ENST00000417389 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
TM9SF4-203ENST00000417389 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
TM9SF4-203ENST00000417389 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
TM9SF4-203ENST00000417389 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
TM9SF4-203ENST00000417389 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
TM9SF4-203ENST00000417389 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
TM9SF4-203ENST00000417389 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
TM9SF4-203ENST00000417389 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
TM9SF4-203ENST00000417389 TRPM1Q7Z4N2 1603 aa15.71■□□□□ 0.11
TM9SF4-203ENST00000417389 SPATA31A6Q5VVP1 1343 aa15.7■□□□□ 0.1
TM9SF4-203ENST00000417389 SRPK2P78362 688 aaKnown RBP15.7■□□□□ 0.1
TM9SF4-203ENST00000417389 PSME1Q06323 249 aa15.7■□□□□ 0.1
TM9SF4-203ENST00000417389 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
TM9SF4-203ENST00000417389 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
TM9SF4-203ENST00000417389 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
TM9SF4-203ENST00000417389 NGDNQ8NEJ9 315 aaKnown RBP15.69■□□□□ 0.1
TM9SF4-203ENST00000417389 ADGRB2O60241 1585 aa15.69■□□□□ 0.1
TM9SF4-203ENST00000417389 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
TM9SF4-203ENST00000417389 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
TM9SF4-203ENST00000417389 ANKARQ7Z5J8 1434 aa15.68■□□□□ 0.1
TM9SF4-203ENST00000417389 KRT28Q7Z3Y7 464 aa15.68■□□□□ 0.1
TM9SF4-203ENST00000417389 NUDT16Q96DE0 195 aaKnown RBP15.67■□□□□ 0.1
TM9SF4-203ENST00000417389 TULP4Q9NRJ4 1543 aa15.67■□□□□ 0.1
TM9SF4-203ENST00000417389 KIF1AQ12756 1690 aa15.67■□□□□ 0.1
TM9SF4-203ENST00000417389 PNPLA6Q8IY17 1366 aa15.66■□□□□ 0.1
TM9SF4-203ENST00000417389 HAP1P54257 671 aaPredicted RBP15.66■□□□□ 0.1
TM9SF4-203ENST00000417389 SHPRHQ149N8 1683 aa15.66■□□□□ 0.1
TM9SF4-203ENST00000417389 PRR36Q9H6K5 1346 aa15.66■□□□□ 0.1
TM9SF4-203ENST00000417389 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
TM9SF4-203ENST00000417389 RGPD8O14715 1765 aaPredicted RBP15.65■□□□□ 0.1
TM9SF4-203ENST00000417389 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
TM9SF4-203ENST00000417389 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
TM9SF4-203ENST00000417389 RALGAPBQ86X10 1494 aa15.65■□□□□ 0.1
TM9SF4-203ENST00000417389 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
TM9SF4-203ENST00000417389 PXDNQ92626 1479 aa15.64■□□□□ 0.09
TM9SF4-203ENST00000417389 EVC2Q86UK5 1308 aa15.64■□□□□ 0.09
TM9SF4-203ENST00000417389 QRICH2Q9H0J4 1663 aa15.63■□□□□ 0.09
TM9SF4-203ENST00000417389 LRP6O75581 1613 aa15.62■□□□□ 0.09
TM9SF4-203ENST00000417389 USP32Q8NFA0 1604 aa15.62■□□□□ 0.09
TM9SF4-203ENST00000417389 C8orf37Q96NL8 207 aa15.62■□□□□ 0.09
TM9SF4-203ENST00000417389 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
TM9SF4-203ENST00000417389 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
TM9SF4-203ENST00000417389 ILDR2Q71H61 639 aa15.61■□□□□ 0.09
TM9SF4-203ENST00000417389 SPATA31A3Q5VYP0 1347 aa15.61■□□□□ 0.09
TM9SF4-203ENST00000417389 ATP7BP35670 1465 aa15.6■□□□□ 0.09
TM9SF4-203ENST00000417389 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
TM9SF4-203ENST00000417389 TNS3Q68CZ2 1445 aa15.59■□□□□ 0.09
TM9SF4-203ENST00000417389 ITSN1Q15811 1721 aa15.58■□□□□ 0.08
TM9SF4-203ENST00000417389 ACEP12821 1306 aa15.58■□□□□ 0.08
TM9SF4-203ENST00000417389 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
TM9SF4-203ENST00000417389 ZNF772Q68DY9 489 aaPredicted RBP15.57■□□□□ 0.08
TM9SF4-203ENST00000417389 RGS17Q9UGC6 210 aaPredicted RBP15.57■□□□□ 0.08
TM9SF4-203ENST00000417389 AFF2P51816 1311 aa15.57■□□□□ 0.08
TM9SF4-203ENST00000417389 SBNO1A3KN83 1393 aa15.57■□□□□ 0.08
TM9SF4-203ENST00000417389 ARHGEF10O15013 1369 aa15.57■□□□□ 0.08
TM9SF4-203ENST00000417389 CABLES1Q8TDN4 633 aa15.56■□□□□ 0.08
TM9SF4-203ENST00000417389 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
TM9SF4-203ENST00000417389 ST20-MTHFSA0A0A6YYL1 179 aa15.55■□□□□ 0.08
TM9SF4-203ENST00000417389 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
TM9SF4-203ENST00000417389 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
TM9SF4-203ENST00000417389 POTEAQ6S8J7 498 aa15.54■□□□□ 0.08
TM9SF4-203ENST00000417389 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
TM9SF4-203ENST00000417389 USP47Q96K76 1375 aa15.53■□□□□ 0.08
TM9SF4-203ENST00000417389 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
TM9SF4-203ENST00000417389 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.08
TM9SF4-203ENST00000417389 POLR3AO14802 1390 aaPredicted RBP15.51■□□□□ 0.07
TM9SF4-203ENST00000417389 TOPAZ1Q8N9V7 1692 aa15.51■□□□□ 0.07
TM9SF4-203ENST00000417389 ABTB2Q8N961 1025 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms