RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 JCADQ9P266 1359 aa20.49■□□□□ 0.87
SLC13A3-205ENST00000417157 PLEKHH1Q9ULM0 1364 aa20.49■□□□□ 0.87
SLC13A3-205ENST00000417157 PRAM1Q96QH2 718 aa20.48■□□□□ 0.87
SLC13A3-205ENST00000417157 POGKQ9P215 609 aa20.48■□□□□ 0.87
SLC13A3-205ENST00000417157 KIAA1210Q9ULL0 1709 aa20.47■□□□□ 0.87
SLC13A3-205ENST00000417157 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
SLC13A3-205ENST00000417157 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
SLC13A3-205ENST00000417157 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.87
SLC13A3-205ENST00000417157 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
SLC13A3-205ENST00000417157 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
SLC13A3-205ENST00000417157 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
SLC13A3-205ENST00000417157 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
SLC13A3-205ENST00000417157 SPATA31A6Q5VVP1 1343 aa20.42■□□□□ 0.86
SLC13A3-205ENST00000417157 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
SLC13A3-205ENST00000417157 SAFB2Q14151 953 aaKnown RBP eCLIP20.41■□□□□ 0.861e-6■■□□□ 11.7
SLC13A3-205ENST00000417157 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
SLC13A3-205ENST00000417157 LRRC59Q96AG4 307 aaKnown RBP20.41■□□□□ 0.86
SLC13A3-205ENST00000417157 ORAI2Q96SN7 254 aa20.41■□□□□ 0.86
SLC13A3-205ENST00000417157 EIF3AQ14152 1382 aaKnown RBP20.41■□□□□ 0.86
SLC13A3-205ENST00000417157 SHPRHQ149N8 1683 aa20.39■□□□□ 0.86
SLC13A3-205ENST00000417157 TONSLQ96HA7 1378 aa20.39■□□□□ 0.85
SLC13A3-205ENST00000417157 NPHP3Q7Z494 1330 aa20.39■□□□□ 0.85
SLC13A3-205ENST00000417157 ARHGEF28Q8N1W1 1705 aaKnown RBP20.38■□□□□ 0.85
SLC13A3-205ENST00000417157 ANKARQ7Z5J8 1434 aa20.37■□□□□ 0.85
SLC13A3-205ENST00000417157 KIF1AQ12756 1690 aa20.37■□□□□ 0.85
SLC13A3-205ENST00000417157 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
SLC13A3-205ENST00000417157 NUTM2FA1L443 756 aa20.36■□□□□ 0.85
SLC13A3-205ENST00000417157 MINK1Q8N4C8 1332 aaPredicted RBP20.34■□□□□ 0.85
SLC13A3-205ENST00000417157 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
SLC13A3-205ENST00000417157 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
SLC13A3-205ENST00000417157 ROCK2O75116 1388 aaKnown RBP20.33■□□□□ 0.84
SLC13A3-205ENST00000417157 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
SLC13A3-205ENST00000417157 TRPM1Q7Z4N2 1603 aa20.32■□□□□ 0.84
SLC13A3-205ENST00000417157 HIRIP3Q9BW71 556 aaPredicted RBP20.32■□□□□ 0.84
SLC13A3-205ENST00000417157 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
SLC13A3-205ENST00000417157 PNPLA6Q8IY17 1366 aa20.32■□□□□ 0.84
SLC13A3-205ENST00000417157 WASLO00401 505 aaPredicted RBP20.31■□□□□ 0.84
SLC13A3-205ENST00000417157 FOXO3O43524 673 aa20.31■□□□□ 0.84
SLC13A3-205ENST00000417157 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
SLC13A3-205ENST00000417157 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
SLC13A3-205ENST00000417157 PXDNQ92626 1479 aa20.3■□□□□ 0.84
SLC13A3-205ENST00000417157 CENPJQ9HC77 1338 aaPredicted RBP20.29■□□□□ 0.84
SLC13A3-205ENST00000417157 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
SLC13A3-205ENST00000417157 LRP6O75581 1613 aa20.28■□□□□ 0.84
SLC13A3-205ENST00000417157 PSME1Q06323 249 aa20.26■□□□□ 0.83
SLC13A3-205ENST00000417157 USP32Q8NFA0 1604 aa20.26■□□□□ 0.83
SLC13A3-205ENST00000417157 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
SLC13A3-205ENST00000417157 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
SLC13A3-205ENST00000417157 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
SLC13A3-205ENST00000417157 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
SLC13A3-205ENST00000417157 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
SLC13A3-205ENST00000417157 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
SLC13A3-205ENST00000417157 COL22A1Q8NFW1 1626 aaPredicted RBP20.24■□□□□ 0.83
SLC13A3-205ENST00000417157 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
SLC13A3-205ENST00000417157 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
SLC13A3-205ENST00000417157 ATP7BP35670 1465 aa20.23■□□□□ 0.83
SLC13A3-205ENST00000417157 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
SLC13A3-205ENST00000417157 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
SLC13A3-205ENST00000417157 CDK19Q9BWU1 502 aa20.22■□□□□ 0.83
SLC13A3-205ENST00000417157 PRR36Q9H6K5 1346 aa20.22■□□□□ 0.83
SLC13A3-205ENST00000417157 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
SLC13A3-205ENST00000417157 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
SLC13A3-205ENST00000417157 TNS3Q68CZ2 1445 aa20.21■□□□□ 0.83
SLC13A3-205ENST00000417157 ZNF772Q68DY9 489 aaPredicted RBP20.21■□□□□ 0.83
SLC13A3-205ENST00000417157 QRICH2Q9H0J4 1663 aa20.21■□□□□ 0.83
SLC13A3-205ENST00000417157 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
SLC13A3-205ENST00000417157 PMFBP1Q8TBY8 1022 aa20.2■□□□□ 0.82
SLC13A3-205ENST00000417157 NUDT16Q96DE0 195 aaKnown RBP20.2■□□□□ 0.82
SLC13A3-205ENST00000417157 CARD11Q9BXL7 1154 aa20.2■□□□□ 0.82
SLC13A3-205ENST00000417157 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
SLC13A3-205ENST00000417157 TIMELESSQ9UNS1 1208 aa20.2■□□□□ 0.82
SLC13A3-205ENST00000417157 ARHGEF10O15013 1369 aa20.19■□□□□ 0.82
SLC13A3-205ENST00000417157 SRPK2P78362 688 aaKnown RBP20.18■□□□□ 0.82
SLC13A3-205ENST00000417157 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
SLC13A3-205ENST00000417157 CCDC61Q9Y6R9 512 aa20.18■□□□□ 0.82
SLC13A3-205ENST00000417157 EVC2Q86UK5 1308 aa20.16■□□□□ 0.82
SLC13A3-205ENST00000417157 TOPAZ1Q8N9V7 1692 aa20.16■□□□□ 0.82
SLC13A3-205ENST00000417157 C8orf37Q96NL8 207 aa20.15■□□□□ 0.82
SLC13A3-205ENST00000417157 SBNO2Q9Y2G9 1366 aa20.15■□□□□ 0.82
SLC13A3-205ENST00000417157 ADAMTS2O95450 1211 aa20.14■□□□□ 0.81
SLC13A3-205ENST00000417157 AFF2P51816 1311 aa20.13■□□□□ 0.81
SLC13A3-205ENST00000417157 SOCS7O14512 581 aa20.13■□□□□ 0.81
SLC13A3-205ENST00000417157 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
SLC13A3-205ENST00000417157 HAP1P54257 671 aaPredicted RBP20.12■□□□□ 0.81
SLC13A3-205ENST00000417157 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
SLC13A3-205ENST00000417157 POTEAQ6S8J7 498 aa20.12■□□□□ 0.81
SLC13A3-205ENST00000417157 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
SLC13A3-205ENST00000417157 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
SLC13A3-205ENST00000417157 PPIP5K1Q6PFW1 1433 aa20.11■□□□□ 0.81
SLC13A3-205ENST00000417157 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
SLC13A3-205ENST00000417157 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
SLC13A3-205ENST00000417157 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
SLC13A3-205ENST00000417157 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.81
SLC13A3-205ENST00000417157 ACEP12821 1306 aa20.08■□□□□ 0.81
SLC13A3-205ENST00000417157 SLC24A1O60721 1099 aa20.08■□□□□ 0.81
SLC13A3-205ENST00000417157 PAK3O75914 559 aaPredicted RBP20.08■□□□□ 0.81
SLC13A3-205ENST00000417157 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.8
SLC13A3-205ENST00000417157 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
SLC13A3-205ENST00000417157 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
SLC13A3-205ENST00000417157 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms