RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
LINC01287-201ENST00000416982 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
LINC01287-201ENST00000416982 CEP152O94986 1710 aa13.13□□□□□ -0.31
LINC01287-201ENST00000416982 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC01287-201ENST00000416982 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
LINC01287-201ENST00000416982 NAP1L5Q96NT1 182 aaPredicted RBP13.12□□□□□ -0.31
LINC01287-201ENST00000416982 MAP3K4Q9Y6R4 1608 aa13.12□□□□□ -0.31
LINC01287-201ENST00000416982 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
LINC01287-201ENST00000416982 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
LINC01287-201ENST00000416982 DIP2CQ9Y2E4 1556 aa13.11□□□□□ -0.31
LINC01287-201ENST00000416982 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
LINC01287-201ENST00000416982 FSD2A1L4K1 749 aa13.1□□□□□ -0.31
LINC01287-201ENST00000416982 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
LINC01287-201ENST00000416982 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
LINC01287-201ENST00000416982 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
LINC01287-201ENST00000416982 ABCC3O15438 1527 aa13.1□□□□□ -0.31
LINC01287-201ENST00000416982 STK26Q9P289 416 aa13.1□□□□□ -0.31
LINC01287-201ENST00000416982 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
LINC01287-201ENST00000416982 XRCC6P12956 609 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01287-201ENST00000416982 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
LINC01287-201ENST00000416982 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
LINC01287-201ENST00000416982 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
LINC01287-201ENST00000416982 RGS3P49796 1198 aa13.08□□□□□ -0.32
LINC01287-201ENST00000416982 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
LINC01287-201ENST00000416982 RICTORQ6R327 1708 aa13.08□□□□□ -0.32
LINC01287-201ENST00000416982 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
LINC01287-201ENST00000416982 LMTK2Q8IWU2 1503 aa13.06□□□□□ -0.32
LINC01287-201ENST00000416982 C14orf93Q9H972 538 aaKnown RBP13.06□□□□□ -0.32
LINC01287-201ENST00000416982 GLI2P10070 1586 aa13.06□□□□□ -0.32
LINC01287-201ENST00000416982 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
LINC01287-201ENST00000416982 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
LINC01287-201ENST00000416982 BECN1Q14457 450 aa13.05□□□□□ -0.32
LINC01287-201ENST00000416982 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
LINC01287-201ENST00000416982 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
LINC01287-201ENST00000416982 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
LINC01287-201ENST00000416982 VGFO15240 615 aaPredicted RBP13.04□□□□□ -0.32
LINC01287-201ENST00000416982 PANK2Q9BZ23 570 aa13.04□□□□□ -0.32
LINC01287-201ENST00000416982 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
LINC01287-201ENST00000416982 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
LINC01287-201ENST00000416982 SIGLEC1Q9BZZ2 1709 aa13.03□□□□□ -0.32
LINC01287-201ENST00000416982 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
LINC01287-201ENST00000416982 SLC52A1Q9NWF4 448 aa13.03□□□□□ -0.32
LINC01287-201ENST00000416982 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
LINC01287-201ENST00000416982 SEC24BO95487 1268 aa13.02□□□□□ -0.32
LINC01287-201ENST00000416982 ZNF521Q96K83 1311 aa13.02□□□□□ -0.32
LINC01287-201ENST00000416982 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
LINC01287-201ENST00000416982 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.33
LINC01287-201ENST00000416982 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
LINC01287-201ENST00000416982 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
LINC01287-201ENST00000416982 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
LINC01287-201ENST00000416982 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
LINC01287-201ENST00000416982 KIF1BO60333 1816 aa13.01□□□□□ -0.33
LINC01287-201ENST00000416982 SYNMO15061 1565 aa13□□□□□ -0.33
LINC01287-201ENST00000416982 ADGRB3O60242 1522 aa13□□□□□ -0.33
LINC01287-201ENST00000416982 CDCA8Q53HL2 280 aa13□□□□□ -0.33
LINC01287-201ENST00000416982 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
LINC01287-201ENST00000416982 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
LINC01287-201ENST00000416982 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
LINC01287-201ENST00000416982 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
LINC01287-201ENST00000416982 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
LINC01287-201ENST00000416982 MYOM2P54296 1465 aa12.99□□□□□ -0.33
LINC01287-201ENST00000416982 MCM4P33991 863 aa12.98□□□□□ -0.33
LINC01287-201ENST00000416982 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
LINC01287-201ENST00000416982 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
LINC01287-201ENST00000416982 MRE11P49959 708 aa12.97□□□□□ -0.33
LINC01287-201ENST00000416982 LAMC1P11047 1609 aa12.97□□□□□ -0.33
LINC01287-201ENST00000416982 IGHDP01880 384 aa12.97□□□□□ -0.33
LINC01287-201ENST00000416982 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.33
LINC01287-201ENST00000416982 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.33
LINC01287-201ENST00000416982 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.33
LINC01287-201ENST00000416982 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
LINC01287-201ENST00000416982 ESPNB1AK53 854 aa12.96□□□□□ -0.33
LINC01287-201ENST00000416982 TPM2P07951 284 aa12.96□□□□□ -0.33
LINC01287-201ENST00000416982 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
LINC01287-201ENST00000416982 ERVK-7P63135 1459 aa12.96□□□□□ -0.34
LINC01287-201ENST00000416982 NRXN1Q9ULB1 1477 aa12.96□□□□□ -0.34
LINC01287-201ENST00000416982 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
LINC01287-201ENST00000416982 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
LINC01287-201ENST00000416982 PRAM1Q96QH2 718 aa12.95□□□□□ -0.34
LINC01287-201ENST00000416982 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
LINC01287-201ENST00000416982 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
LINC01287-201ENST00000416982 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
LINC01287-201ENST00000416982 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
LINC01287-201ENST00000416982 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
LINC01287-201ENST00000416982 PDCL3Q9H2J4 239 aa12.93□□□□□ -0.34
LINC01287-201ENST00000416982 KIF13AQ9H1H9 1805 aa12.93□□□□□ -0.34
LINC01287-201ENST00000416982 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
LINC01287-201ENST00000416982 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
LINC01287-201ENST00000416982 TRAK2O60296 914 aa12.92□□□□□ -0.34
LINC01287-201ENST00000416982 GRPEL1Q9HAV7 217 aa12.92□□□□□ -0.34
LINC01287-201ENST00000416982 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
LINC01287-201ENST00000416982 NKTRP30414 1462 aaKnown RBP12.92□□□□□ -0.34
LINC01287-201ENST00000416982 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
LINC01287-201ENST00000416982 NEXMIFQ5QGS0 1516 aa12.91□□□□□ -0.34
LINC01287-201ENST00000416982 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
LINC01287-201ENST00000416982 CALD1Q05682 793 aaKnown RBP12.91□□□□□ -0.34
LINC01287-201ENST00000416982 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
LINC01287-201ENST00000416982 CCDC146Q8IYE0 955 aa12.91□□□□□ -0.34
LINC01287-201ENST00000416982 CGNL1Q0VF96 1302 aa12.9□□□□□ -0.34
LINC01287-201ENST00000416982 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms