RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 NUTM2AQ8IVF1 878 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-210ENST00000416778 LRP6O75581 1613 aa26.25■■□□□ 1.79
CPNE1-210ENST00000416778 YTHDC2Q9H6S0 1430 aaKnown RBP26.24■■□□□ 1.79
CPNE1-210ENST00000416778 PLEKHH1Q9ULM0 1364 aa26.24■■□□□ 1.79
CPNE1-210ENST00000416778 SOS2Q07890 1332 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-210ENST00000416778 MEX3CQ5U5Q3 659 aaKnown RBP26.23■■□□□ 1.79
CPNE1-210ENST00000416778 ESCO1Q5FWF5 840 aa26.22■■□□□ 1.79
CPNE1-210ENST00000416778 KDM2AQ9Y2K7 1162 aa26.22■■□□□ 1.79
CPNE1-210ENST00000416778 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
CPNE1-210ENST00000416778 DCAF11Q8TEB1 546 aa26.21■■□□□ 1.79
CPNE1-210ENST00000416778 MYOM2P54296 1465 aa26.21■■□□□ 1.79
CPNE1-210ENST00000416778 NHSL1Q5SYE7 1610 aa26.21■■□□□ 1.79
CPNE1-210ENST00000416778 STAC3Q96MF2 364 aa26.2■■□□□ 1.78
CPNE1-210ENST00000416778 SHPRHQ149N8 1683 aa26.19■■□□□ 1.78
CPNE1-210ENST00000416778 NUTM2FA1L443 756 aa26.18■■□□□ 1.78
CPNE1-210ENST00000416778 ZNF772Q68DY9 489 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-210ENST00000416778 PNPLA6Q8IY17 1366 aa26.18■■□□□ 1.78
CPNE1-210ENST00000416778 FOXO3O43524 673 aa26.16■■□□□ 1.78
CPNE1-210ENST00000416778 PRAM1Q96QH2 718 aa26.14■■□□□ 1.78
CPNE1-210ENST00000416778 LAMC1P11047 1609 aa26.13■■□□□ 1.77
CPNE1-210ENST00000416778 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
CPNE1-210ENST00000416778 NPHP3Q7Z494 1330 aa26.12■■□□□ 1.77
CPNE1-210ENST00000416778 SAFB2Q14151 953 aaKnown RBP eCLIP26.1■■□□□ 1.773e-13■□□□□ 9.1
CPNE1-210ENST00000416778 POGKQ9P215 609 aa26.1■■□□□ 1.77
CPNE1-210ENST00000416778 TRAK1Q9UPV9 953 aa26.09■■□□□ 1.77
CPNE1-210ENST00000416778 AFF2P51816 1311 aa26.09■■□□□ 1.77
CPNE1-210ENST00000416778 KNDC1Q76NI1 1749 aa26.08■■□□□ 1.77
CPNE1-210ENST00000416778 XPCQ01831 940 aaPredicted RBP26.08■■□□□ 1.77
CPNE1-210ENST00000416778 ADAMTS2O95450 1211 aa26.07■■□□□ 1.76
CPNE1-210ENST00000416778 C8orf37Q96NL8 207 aa26.07■■□□□ 1.76
CPNE1-210ENST00000416778 RXRBP28702 533 aa26.06■■□□□ 1.76
CPNE1-210ENST00000416778 ADGRB1O14514 1584 aa26.04■■□□□ 1.76
CPNE1-210ENST00000416778 NGLY1Q96IV0 654 aa26.04■■□□□ 1.76
CPNE1-210ENST00000416778 KRT28Q7Z3Y7 464 aa26.03■■□□□ 1.76
CPNE1-210ENST00000416778 QTRT2Q9H974 415 aaKnown RBP26.03■■□□□ 1.76
CPNE1-210ENST00000416778 PXDNQ92626 1479 aa26.03■■□□□ 1.76
CPNE1-210ENST00000416778 PHF8Q9UPP1 1060 aa26.02■■□□□ 1.76
CPNE1-210ENST00000416778 DLC1Q96QB1 1528 aa26.02■■□□□ 1.76
CPNE1-210ENST00000416778 HIRIP3Q9BW71 556 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-210ENST00000416778 SPATA31A3Q5VYP0 1347 aa25.98■■□□□ 1.75
CPNE1-210ENST00000416778 FNBP4Q8N3X1 1017 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-210ENST00000416778 FMN2Q9NZ56 1722 aa25.97■■□□□ 1.75
CPNE1-210ENST00000416778 MINK1Q8N4C8 1332 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-210ENST00000416778 PSME1Q06323 249 aa25.96■■□□□ 1.75
CPNE1-210ENST00000416778 WASLO00401 505 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-210ENST00000416778 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
CPNE1-210ENST00000416778 USP21Q9UK80 565 aa25.94■■□□□ 1.74
CPNE1-210ENST00000416778 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
CPNE1-210ENST00000416778 NBPF1Q3BBV0 1214 aa25.92■■□□□ 1.74
CPNE1-210ENST00000416778 COL22A1Q8NFW1 1626 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-210ENST00000416778 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
CPNE1-210ENST00000416778 ANKARQ7Z5J8 1434 aa25.9■■□□□ 1.74
CPNE1-210ENST00000416778 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
CPNE1-210ENST00000416778 CDK12Q9NYV4 1490 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-210ENST00000416778 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
CPNE1-210ENST00000416778 TRPC5Q9UL62 973 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-210ENST00000416778 RGPD8O14715 1765 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-210ENST00000416778 SBNO1A3KN83 1393 aa25.87■■□□□ 1.73
CPNE1-210ENST00000416778 UPF1Q92900 1129 aaKnown RBP eCLIP25.86■■□□□ 1.73
CPNE1-210ENST00000416778 KIF1AQ12756 1690 aa25.86■■□□□ 1.73
CPNE1-210ENST00000416778 CABLES1Q8TDN4 633 aa25.85■■□□□ 1.73
CPNE1-210ENST00000416778 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
CPNE1-210ENST00000416778 NUDT16Q96DE0 195 aaKnown RBP25.83■■□□□ 1.73
CPNE1-210ENST00000416778 CDK19Q9BWU1 502 aa25.83■■□□□ 1.73
CPNE1-210ENST00000416778 BCL9LQ86UU0 1499 aa25.83■■□□□ 1.73
CPNE1-210ENST00000416778 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
CPNE1-210ENST00000416778 USP32Q8NFA0 1604 aa25.82■■□□□ 1.72
CPNE1-210ENST00000416778 LMOD2Q6P5Q4 547 aa25.82■■□□□ 1.72
CPNE1-210ENST00000416778 TNS3Q68CZ2 1445 aa25.81■■□□□ 1.72
CPNE1-210ENST00000416778 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
CPNE1-210ENST00000416778 ATRNO75882 1429 aa25.8■■□□□ 1.72
CPNE1-210ENST00000416778 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
CPNE1-210ENST00000416778 UNC5CLQ8IV45 518 aa25.78■■□□□ 1.72
CPNE1-210ENST00000416778 ARHGEF10O15013 1369 aa25.78■■□□□ 1.72
CPNE1-210ENST00000416778 GPRASP1Q5JY77 1395 aa25.78■■□□□ 1.72
CPNE1-210ENST00000416778 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
CPNE1-210ENST00000416778 PLEKHG5O94827 1062 aa25.77■■□□□ 1.72
CPNE1-210ENST00000416778 RGS12O14924 1447 aa25.77■■□□□ 1.72
CPNE1-210ENST00000416778 GJD4Q96KN9 370 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-210ENST00000416778 KIAA1210Q9ULL0 1709 aa25.75■■□□□ 1.71
CPNE1-210ENST00000416778 HAP1P54257 671 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-210ENST00000416778 FAM83GA6ND36 823 aa25.74■■□□□ 1.71
CPNE1-210ENST00000416778 CCDC61Q9Y6R9 512 aa25.74■■□□□ 1.71
CPNE1-210ENST00000416778 PLEKHG3A1L390 1219 aa25.73■■□□□ 1.71
CPNE1-210ENST00000416778 ARHGEF28Q8N1W1 1705 aaKnown RBP25.73■■□□□ 1.71
CPNE1-210ENST00000416778 SLIT2O94813 1529 aa25.73■■□□□ 1.71
CPNE1-210ENST00000416778 NBPF8Q3BBV2 869 aa25.71■■□□□ 1.71
CPNE1-210ENST00000416778 CENPJQ9HC77 1338 aaPredicted RBP25.7■■□□□ 1.71
CPNE1-210ENST00000416778 PAK3O75914 559 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-210ENST00000416778 ATP7BP35670 1465 aa25.69■■□□□ 1.7
CPNE1-210ENST00000416778 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
CPNE1-210ENST00000416778 ACEP12821 1306 aa25.67■■□□□ 1.7
CPNE1-210ENST00000416778 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-210ENST00000416778 VPS72Q15906 364 aa25.66■■□□□ 1.7
CPNE1-210ENST00000416778 POLR3AO14802 1390 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-210ENST00000416778 CABP2Q9NPB3 220 aa25.65■■□□□ 1.7
CPNE1-210ENST00000416778 TRPM3Q9HCF6 1732 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-210ENST00000416778 SRPK2P78362 688 aaKnown RBP25.64■■□□□ 1.7
CPNE1-210ENST00000416778 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-210ENST00000416778 RALGAPBQ86X10 1494 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms