RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.06
CLIP4-205ENST00000415891 COPB2P35606 906 aa8.4□□□□□ -1.06
CLIP4-205ENST00000415891 C1QTNF12Q5T7M4 302 aa8.4□□□□□ -1.06
CLIP4-205ENST00000415891 SREK1Q8WXA9 508 aaKnown RBP8.4□□□□□ -1.06
CLIP4-205ENST00000415891 PAIP2Q9BPZ3 127 aaKnown RBP8.4□□□□□ -1.06
CLIP4-205ENST00000415891 KDM4CQ9H3R0 1056 aa8.4□□□□□ -1.06
CLIP4-205ENST00000415891 COMMD10Q9Y6G5 202 aa8.4□□□□□ -1.06
CLIP4-205ENST00000415891 PARNO95453 639 aaKnown RBP8.4□□□□□ -1.07
CLIP4-205ENST00000415891 RPAINQ86UA6 219 aa8.4□□□□□ -1.07
CLIP4-205ENST00000415891 AMOTL1Q8IY63 956 aa8.4□□□□□ -1.07
CLIP4-205ENST00000415891 CCDC94Q9BW85 323 aaPredicted RBP8.4□□□□□ -1.07
CLIP4-205ENST00000415891 ANAPC4Q9UJX5 808 aa8.4□□□□□ -1.07
CLIP4-205ENST00000415891 TPX2Q9ULW0 747 aaKnown RBP8.4□□□□□ -1.07
CLIP4-205ENST00000415891 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
CLIP4-205ENST00000415891 COQ9O75208 318 aa8.39□□□□□ -1.07
CLIP4-205ENST00000415891 MIER1Q8N108 512 aa8.39□□□□□ -1.07
CLIP4-205ENST00000415891 PNNQ9H307 717 aaKnown RBP8.39□□□□□ -1.07
CLIP4-205ENST00000415891 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
CLIP4-205ENST00000415891 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
CLIP4-205ENST00000415891 GPATCH3Q96I76 525 aa8.38□□□□□ -1.07
CLIP4-205ENST00000415891 GNL3LQ9NVN8 582 aaKnown RBP8.38□□□□□ -1.07
CLIP4-205ENST00000415891 NRBP1Q9UHY1 535 aa8.38□□□□□ -1.07
CLIP4-205ENST00000415891 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
CLIP4-205ENST00000415891 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
CLIP4-205ENST00000415891 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
CLIP4-205ENST00000415891 GTPBP4Q9BZE4 634 aaKnown RBP8.38□□□□□ -1.07
CLIP4-205ENST00000415891 FAM13BQ9NYF5 915 aa8.38□□□□□ -1.07
CLIP4-205ENST00000415891 A6NJR5 290 aa8.37□□□□□ -1.07
CLIP4-205ENST00000415891 PPP4CP60510 307 aa8.37□□□□□ -1.07
CLIP4-205ENST00000415891 CALR3Q96L12 384 aaKnown RBP8.37□□□□□ -1.07
CLIP4-205ENST00000415891 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
CLIP4-205ENST00000415891 PPP1R1BQ9UD71 204 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-205ENST00000415891 SYNRGQ9UMZ2 1314 aa8.37□□□□□ -1.07
CLIP4-205ENST00000415891 CFAP69A5D8W1 941 aa8.37□□□□□ -1.07
CLIP4-205ENST00000415891 SMAPO00193 183 aa8.36□□□□□ -1.07
CLIP4-205ENST00000415891 U2SURPO15042 1029 aaKnown RBP8.36□□□□□ -1.07
CLIP4-205ENST00000415891 C11orf96Q7Z7L8 435 aa8.36□□□□□ -1.07
CLIP4-205ENST00000415891 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
CLIP4-205ENST00000415891 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
CLIP4-205ENST00000415891 WDHD1O75717 1129 aaPredicted RBP8.36□□□□□ -1.07
CLIP4-205ENST00000415891 SF3B2Q13435 895 aaKnown RBP8.36□□□□□ -1.07
CLIP4-205ENST00000415891 PUF60Q9UHX1 559 aaKnown RBP8.36□□□□□ -1.07
CLIP4-205ENST00000415891 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
CLIP4-205ENST00000415891 MPHOSPH10O00566 681 aaKnown RBP8.35□□□□□ -1.07
CLIP4-205ENST00000415891 EIF3JO75822 258 aaKnown RBP8.35□□□□□ -1.07
CLIP4-205ENST00000415891 CT47A1Q5JQC4 288 aaPredicted RBP8.35□□□□□ -1.07
CLIP4-205ENST00000415891 ABCF2Q9UG63 623 aa8.34□□□□□ -1.07
CLIP4-205ENST00000415891 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
CLIP4-205ENST00000415891 CLCN1P35523 988 aa8.34□□□□□ -1.07
CLIP4-205ENST00000415891 CD151P48509 253 aa8.34□□□□□ -1.07
CLIP4-205ENST00000415891 FLIIQ13045 1269 aa8.34□□□□□ -1.07
CLIP4-205ENST00000415891 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
CLIP4-205ENST00000415891 MYCBPQ99417 103 aaPredicted RBP8.34□□□□□ -1.07
CLIP4-205ENST00000415891 RANBP17Q9H2T7 1088 aaKnown RBP8.34□□□□□ -1.07
CLIP4-205ENST00000415891 ZBTB47Q9UFB7 747 aaPredicted RBP8.34□□□□□ -1.07
CLIP4-205ENST00000415891 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
CLIP4-205ENST00000415891 CDC37Q16543 378 aaPredicted RBP8.33□□□□□ -1.08
CLIP4-205ENST00000415891 ACRBPQ8NEB7 543 aa8.33□□□□□ -1.08
CLIP4-205ENST00000415891 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
CLIP4-205ENST00000415891 ARPC5LQ9BPX5 153 aa8.33□□□□□ -1.08
CLIP4-205ENST00000415891 GABBR1Q9UBS5 961 aa8.33□□□□□ -1.08
CLIP4-205ENST00000415891 TCF3P15923 654 aa8.33□□□□□ -1.08
CLIP4-205ENST00000415891 NAT1P18440 290 aa8.33□□□□□ -1.08
CLIP4-205ENST00000415891 IRX5P78411 483 aaPredicted RBP8.33□□□□□ -1.08
CLIP4-205ENST00000415891 TSR1Q2NL82 804 aaKnown RBP8.33□□□□□ -1.08
CLIP4-205ENST00000415891 ICE2Q659A1 982 aa8.33□□□□□ -1.08
CLIP4-205ENST00000415891 RRAGDQ9NQL2 400 aaPredicted RBP8.33□□□□□ -1.08
CLIP4-205ENST00000415891 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
CLIP4-205ENST00000415891 CCT2P78371 535 aaKnown RBP8.32□□□□□ -1.08
CLIP4-205ENST00000415891 GSE1Q14687 1217 aa8.32□□□□□ -1.08
CLIP4-205ENST00000415891 SUDS3Q9H7L9 328 aaPredicted RBP8.32□□□□□ -1.08
CLIP4-205ENST00000415891 FAN1Q9Y2M0 1017 aa8.32□□□□□ -1.08
CLIP4-205ENST00000415891 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
CLIP4-205ENST00000415891 PAX7P23759 505 aa8.32□□□□□ -1.08
CLIP4-205ENST00000415891 TTC30BQ8N4P2 665 aa8.32□□□□□ -1.08
CLIP4-205ENST00000415891 PPP1R12AO14974 1030 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-205ENST00000415891 MTERF4Q7Z6M4 381 aaKnown RBP8.31□□□□□ -1.08
CLIP4-205ENST00000415891 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
CLIP4-205ENST00000415891 SERPINA10Q9UK55 444 aa8.31□□□□□ -1.08
CLIP4-205ENST00000415891 PHF8Q9UPP1 1060 aa8.31□□□□□ -1.08
CLIP4-205ENST00000415891 PEX19P40855 299 aa8.31□□□□□ -1.08
CLIP4-205ENST00000415891 UBXN4Q92575 508 aa8.31□□□□□ -1.08
CLIP4-205ENST00000415891 MRRFQ96E11 262 aaKnown RBP8.31□□□□□ -1.08
CLIP4-205ENST00000415891 SENP7Q9BQF6 1050 aa8.31□□□□□ -1.08
CLIP4-205ENST00000415891 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
CLIP4-205ENST00000415891 FLT3P36888 993 aa8.3□□□□□ -1.08
CLIP4-205ENST00000415891 SF3A1Q15459 793 aaKnown RBP8.3□□□□□ -1.08
CLIP4-205ENST00000415891 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
CLIP4-205ENST00000415891 WWC3Q9ULE0 1092 aa8.3□□□□□ -1.08
CLIP4-205ENST00000415891 CIZ1Q9ULV3 898 aaPredicted RBP8.3□□□□□ -1.08
CLIP4-205ENST00000415891 KIF16BQ96L93 1317 aa8.3□□□□□ -1.08
CLIP4-205ENST00000415891 CTAGE5O15320 804 aa8.29□□□□□ -1.08
CLIP4-205ENST00000415891 ZNF853P0CG23 659 aa8.29□□□□□ -1.08
CLIP4-205ENST00000415891 PNISRQ8TF01 805 aaKnown RBP8.29□□□□□ -1.08
CLIP4-205ENST00000415891 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLIP4-205ENST00000415891 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
CLIP4-205ENST00000415891 KLHL33A6NCF5 533 aa8.29□□□□□ -1.08
CLIP4-205ENST00000415891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-205ENST00000415891 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-205ENST00000415891 LSM14AQ8ND56 463 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms