RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
LINC00428-201ENST00000415620 TRIM47Q96LD4 638 aa6.87□□□□□ -1.31
LINC00428-201ENST00000415620 TESPA1A2RU30 521 aaPredicted RBP6.86□□□□□ -1.31
LINC00428-201ENST00000415620 SNRPBP14678 240 aaKnown RBP6.86□□□□□ -1.31
LINC00428-201ENST00000415620 FECHP22830 423 aa6.86□□□□□ -1.31
LINC00428-201ENST00000415620 GCGRP47871 477 aa6.86□□□□□ -1.31
LINC00428-201ENST00000415620 GRIPAP1Q4V328 841 aa6.86□□□□□ -1.31
LINC00428-201ENST00000415620 SULF1Q8IWU6 871 aa6.86□□□□□ -1.31
LINC00428-201ENST00000415620 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
LINC00428-201ENST00000415620 PRDM9Q9NQV7 894 aa6.86□□□□□ -1.31
LINC00428-201ENST00000415620 FAM181BA6NEQ2 426 aa6.85□□□□□ -1.31
LINC00428-201ENST00000415620 GNPATO15228 680 aa6.84□□□□□ -1.31
LINC00428-201ENST00000415620 TRIM32Q13049 653 aa6.84□□□□□ -1.31
LINC00428-201ENST00000415620 MRGPRX2Q96LB1 330 aa6.84□□□□□ -1.31
LINC00428-201ENST00000415620 REPIN1Q9BWE0 567 aaKnown RBP6.84□□□□□ -1.31
LINC00428-201ENST00000415620 J3QL48 77 aa6.83□□□□□ -1.32
LINC00428-201ENST00000415620 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
LINC00428-201ENST00000415620 SLC16A10Q8TF71 515 aa6.83□□□□□ -1.32
LINC00428-201ENST00000415620 Q3C1V9 767 aa6.82□□□□□ -1.32
LINC00428-201ENST00000415620 RNF19BQ6ZMZ0 732 aa6.82□□□□□ -1.32
LINC00428-201ENST00000415620 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
LINC00428-201ENST00000415620 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
LINC00428-201ENST00000415620 HPS1Q92902 700 aa6.81□□□□□ -1.32
LINC00428-201ENST00000415620 MMP16P51512 607 aa6.8□□□□□ -1.32
LINC00428-201ENST00000415620 NLRP7Q8WX94 980 aa6.79□□□□□ -1.32
LINC00428-201ENST00000415620 PHOX2BQ99453 314 aa6.79□□□□□ -1.32
LINC00428-201ENST00000415620 RC3H1Q5TC82 1133 aaKnown RBP6.78□□□□□ -1.32
LINC00428-201ENST00000415620 NXF1Q9UBU9 619 aaKnown RBP6.78□□□□□ -1.32
LINC00428-201ENST00000415620 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
LINC00428-201ENST00000415620 WNT7BP56706 349 aa6.76□□□□□ -1.33
LINC00428-201ENST00000415620 CCDC24Q8N4L8 307 aa6.76□□□□□ -1.33
LINC00428-201ENST00000415620 ZSCAN1Q8NBB4 408 aa6.76□□□□□ -1.33
LINC00428-201ENST00000415620 DXOO77932 396 aaKnown RBP6.75□□□□□ -1.33
LINC00428-201ENST00000415620 NPAS3Q8IXF0 933 aa6.75□□□□□ -1.33
LINC00428-201ENST00000415620 IRF7Q92985 503 aa6.75□□□□□ -1.33
LINC00428-201ENST00000415620 ALDH1A1P00352 501 aa6.74□□□□□ -1.33
LINC00428-201ENST00000415620 GMPRP36959 345 aa6.74□□□□□ -1.33
LINC00428-201ENST00000415620 KDM4AO75164 1064 aa6.72□□□□□ -1.33
LINC00428-201ENST00000415620 CD46P15529 392 aa6.72□□□□□ -1.33
LINC00428-201ENST00000415620 SKOR1P84550 965 aa6.72□□□□□ -1.33
LINC00428-201ENST00000415620 CAPN5O15484 640 aaPredicted RBP6.71□□□□□ -1.34
LINC00428-201ENST00000415620 WASF2Q9Y6W5 498 aa6.71□□□□□ -1.34
LINC00428-201ENST00000415620 USP46P62068 366 aa6.7□□□□□ -1.34
LINC00428-201ENST00000415620 H3BM21 787 aa6.69□□□□□ -1.34
LINC00428-201ENST00000415620 BMP1P13497 986 aa6.69□□□□□ -1.34
LINC00428-201ENST00000415620 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
LINC00428-201ENST00000415620 TRIM46Q7Z4K8 759 aa6.69□□□□□ -1.34
LINC00428-201ENST00000415620 GPIHBP1Q8IV16 184 aa6.69□□□□□ -1.34
LINC00428-201ENST00000415620 EHBP1Q8NDI1 1231 aa6.69□□□□□ -1.34
LINC00428-201ENST00000415620 JUNDP17535 347 aa6.68□□□□□ -1.34
LINC00428-201ENST00000415620 VEGFBP49765 207 aa6.68□□□□□ -1.34
LINC00428-201ENST00000415620 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
LINC00428-201ENST00000415620 SIAH2O43255 324 aa6.67□□□□□ -1.34
LINC00428-201ENST00000415620 PLCB2Q00722 1185 aa6.67□□□□□ -1.34
LINC00428-201ENST00000415620 MAP2K5Q13163 448 aa6.67□□□□□ -1.34
LINC00428-201ENST00000415620 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
LINC00428-201ENST00000415620 HLA-CQ95604 372 aa6.65□□□□□ -1.34
LINC00428-201ENST00000415620 NUDT12Q9BQG2 462 aa6.65□□□□□ -1.34
LINC00428-201ENST00000415620 HOXA2O43364 376 aa6.64□□□□□ -1.35
LINC00428-201ENST00000415620 ZFP42Q96MM3 310 aa6.64□□□□□ -1.35
LINC00428-201ENST00000415620 ERBB4Q15303 1308 aa6.64□□□□□ -1.35
LINC00428-201ENST00000415620 IRF6O14896 467 aa6.63□□□□□ -1.35
LINC00428-201ENST00000415620 PTCRAQ6ISU1 281 aaPredicted RBP6.63□□□□□ -1.35
LINC00428-201ENST00000415620 RETREG3Q86VR2 466 aa6.62□□□□□ -1.35
LINC00428-201ENST00000415620 PLEKHG3A1L390 1219 aa6.61□□□□□ -1.35
LINC00428-201ENST00000415620 SH3BP2P78314 561 aa6.61□□□□□ -1.35
LINC00428-201ENST00000415620 MDM2Q00987 491 aaPredicted RBP6.61□□□□□ -1.35
LINC00428-201ENST00000415620 GUCA2AQ02747 115 aa6.61□□□□□ -1.35
LINC00428-201ENST00000415620 SCARF1Q14162 830 aa6.61□□□□□ -1.35
LINC00428-201ENST00000415620 SYMPKQ92797 1274 aaKnown RBP6.61□□□□□ -1.35
LINC00428-201ENST00000415620 MINK1Q8N4C8 1332 aaPredicted RBP6.6□□□□□ -1.35
LINC00428-201ENST00000415620 SUZ12Q15022 739 aaKnown RBP6.6□□□□□ -1.35
LINC00428-201ENST00000415620 MRPL14Q6P1L8 145 aaKnown RBP6.6□□□□□ -1.35
LINC00428-201ENST00000415620 NUTM1Q86Y26 1132 aa6.6□□□□□ -1.35
LINC00428-201ENST00000415620 CCNYL3P0C7X3 344 aa6.59□□□□□ -1.35
LINC00428-201ENST00000415620 MS4A1P11836 297 aa6.59□□□□□ -1.35
LINC00428-201ENST00000415620 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
LINC00428-201ENST00000415620 NNTQ13423 1086 aa6.58□□□□□ -1.36
LINC00428-201ENST00000415620 MPNDQ8N594 471 aa6.58□□□□□ -1.36
LINC00428-201ENST00000415620 FAM217BQ9NTX9 383 aaPredicted RBP6.58□□□□□ -1.36
LINC00428-201ENST00000415620 KDM2AQ9Y2K7 1162 aa6.58□□□□□ -1.36
LINC00428-201ENST00000415620 C6orf229H3BNL8 230 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 VSIG8P0DPA2 414 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 KCNMA1Q12791 1236 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 BAP1Q92560 729 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 CCDC102AQ96A19 550 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 PURBQ96QR8 312 aaKnown RBP6.57□□□□□ -1.36
LINC00428-201ENST00000415620 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 GPCPD1Q9NPB8 672 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 EVA1BQ9NVM1 165 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
LINC00428-201ENST00000415620 ADH1CP00326 375 aa6.56□□□□□ -1.36
LINC00428-201ENST00000415620 FDX1P10109 184 aa6.56□□□□□ -1.36
LINC00428-201ENST00000415620 WDR4P57081 412 aaKnown RBP6.56□□□□□ -1.36
LINC00428-201ENST00000415620 PTPRNQ16849 979 aa6.56□□□□□ -1.36
LINC00428-201ENST00000415620 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
LINC00428-201ENST00000415620 CLCN1P35523 988 aa6.55□□□□□ -1.36
LINC00428-201ENST00000415620 KCNH2Q12809 1159 aa6.55□□□□□ -1.36
LINC00428-201ENST00000415620 SOBPA7XYQ1 873 aa6.54□□□□□ -1.36
LINC00428-201ENST00000415620 TIMP2P16035 220 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms