RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 NAIPQ13075 1403 aa24.24■■□□□ 1.47
SYNGR1-206ENST00000415332 MYOM2P54296 1465 aa24.22■■□□□ 1.47
SYNGR1-206ENST00000415332 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
SYNGR1-206ENST00000415332 BCL9LQ86UU0 1499 aa24.2■■□□□ 1.47
SYNGR1-206ENST00000415332 PXDNQ92626 1479 aa24.19■■□□□ 1.46
SYNGR1-206ENST00000415332 XPCQ01831 940 aaPredicted RBP24.19■■□□□ 1.46
SYNGR1-206ENST00000415332 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
SYNGR1-206ENST00000415332 EP400Q96L91 3159 aa24.18■■□□□ 1.46
SYNGR1-206ENST00000415332 CDC42BPGQ6DT37 1551 aa24.18■■□□□ 1.46
SYNGR1-206ENST00000415332 RPGRIP1LQ68CZ1 1315 aa24.17■■□□□ 1.46
SYNGR1-206ENST00000415332 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
SYNGR1-206ENST00000415332 FOXO3O43524 673 aa24.15■■□□□ 1.46
SYNGR1-206ENST00000415332 RRBP1Q9P2E9 1410 aaKnown RBP24.15■■□□□ 1.46
SYNGR1-206ENST00000415332 ZRANB1Q9UGI0 708 aa24.14■■□□□ 1.45
SYNGR1-206ENST00000415332 NUTM2FA1L443 756 aa24.13■■□□□ 1.45
SYNGR1-206ENST00000415332 WAPLQ7Z5K2 1190 aa24.12■■□□□ 1.45
SYNGR1-206ENST00000415332 GJD4Q96KN9 370 aaPredicted RBP24.12■■□□□ 1.45
SYNGR1-206ENST00000415332 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.12■■□□□ 1.45
SYNGR1-206ENST00000415332 ADGRF5Q8IZF2 1346 aa24.11■■□□□ 1.45
SYNGR1-206ENST00000415332 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
SYNGR1-206ENST00000415332 BRWD3Q6RI45 1802 aa24.1■■□□□ 1.45
SYNGR1-206ENST00000415332 FOXD1Q16676 465 aa24.1■■□□□ 1.45
SYNGR1-206ENST00000415332 STK26Q9P289 416 aa24.1■■□□□ 1.45
SYNGR1-206ENST00000415332 GLI3P10071 1580 aa24.1■■□□□ 1.45
SYNGR1-206ENST00000415332 PLEKHH1Q9ULM0 1364 aa24.08■■□□□ 1.45
SYNGR1-206ENST00000415332 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
SYNGR1-206ENST00000415332 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
SYNGR1-206ENST00000415332 RGPD8O14715 1765 aaPredicted RBP24.07■■□□□ 1.44
SYNGR1-206ENST00000415332 CCDC125Q86Z20 511 aa24.07■■□□□ 1.44
SYNGR1-206ENST00000415332 KNDC1Q76NI1 1749 aa24.06■■□□□ 1.44
SYNGR1-206ENST00000415332 SLIT2O94813 1529 aa24.05■■□□□ 1.44
SYNGR1-206ENST00000415332 TECPR2O15040 1411 aa24.05■■□□□ 1.44
SYNGR1-206ENST00000415332 RALGAPBQ86X10 1494 aa24.05■■□□□ 1.44
SYNGR1-206ENST00000415332 LRPPRCP42704 1394 aaKnown RBP24.04■■□□□ 1.44
SYNGR1-206ENST00000415332 TMEM132EQ6IEE7 984 aa24.04■■□□□ 1.44
SYNGR1-206ENST00000415332 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
SYNGR1-206ENST00000415332 UNC5CLQ8IV45 518 aa24.03■■□□□ 1.44
SYNGR1-206ENST00000415332 SPATA31A3Q5VYP0 1347 aa24.03■■□□□ 1.44
SYNGR1-206ENST00000415332 USP32Q8NFA0 1604 aa24.02■■□□□ 1.44
SYNGR1-206ENST00000415332 KIF1AQ12756 1690 aa24.02■■□□□ 1.44
SYNGR1-206ENST00000415332 ABCC11Q96J66 1382 aa24■■□□□ 1.43
SYNGR1-206ENST00000415332 SPATA31E1Q6ZUB1 1445 aa24■■□□□ 1.43
SYNGR1-206ENST00000415332 DEFB132Q7Z7B7 95 aa23.99■■□□□ 1.43
SYNGR1-206ENST00000415332 BLMP54132 1417 aaPredicted RBP23.99■■□□□ 1.43
SYNGR1-206ENST00000415332 KRT28Q7Z3Y7 464 aa23.98■■□□□ 1.43
SYNGR1-206ENST00000415332 CCDC144AA2RUR9 1427 aa23.97■■□□□ 1.43
SYNGR1-206ENST00000415332 PLCH1Q4KWH8 1693 aa23.97■■□□□ 1.43
SYNGR1-206ENST00000415332 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
SYNGR1-206ENST00000415332 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
SYNGR1-206ENST00000415332 YTHDC2Q9H6S0 1430 aaKnown RBP23.95■■□□□ 1.42
SYNGR1-206ENST00000415332 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
SYNGR1-206ENST00000415332 ABCA3Q99758 1704 aa23.95■■□□□ 1.42
SYNGR1-206ENST00000415332 ANKRD30BQ9BXX2 1392 aa23.94■■□□□ 1.42
SYNGR1-206ENST00000415332 SEPT12Q8IYM1 358 aa23.94■■□□□ 1.42
SYNGR1-206ENST00000415332 NWD2Q9ULI1 1742 aa23.93■■□□□ 1.42
SYNGR1-206ENST00000415332 TNS3Q68CZ2 1445 aa23.92■■□□□ 1.42
SYNGR1-206ENST00000415332 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
SYNGR1-206ENST00000415332 VPS72Q15906 364 aa23.9■■□□□ 1.42
SYNGR1-206ENST00000415332 HAP1P54257 671 aaPredicted RBP23.89■■□□□ 1.41
SYNGR1-206ENST00000415332 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
SYNGR1-206ENST00000415332 ONECUT3O60422 494 aaPredicted RBP23.87■■□□□ 1.41
SYNGR1-206ENST00000415332 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
SYNGR1-206ENST00000415332 CCDC9Q9Y3X0 531 aaKnown RBP23.87■■□□□ 1.41
SYNGR1-206ENST00000415332 NRXN1Q9ULB1 1477 aa23.87■■□□□ 1.41
SYNGR1-206ENST00000415332 PSME1Q06323 249 aa23.85■■□□□ 1.41
SYNGR1-206ENST00000415332 SF3B2Q13435 895 aaKnown RBP23.85■■□□□ 1.41
SYNGR1-206ENST00000415332 LMOD2Q6P5Q4 547 aa23.85■■□□□ 1.41
SYNGR1-206ENST00000415332 C14orf93Q9H972 538 aaKnown RBP23.85■■□□□ 1.41
SYNGR1-206ENST00000415332 NRAPQ86VF7 1730 aa23.84■■□□□ 1.41
SYNGR1-206ENST00000415332 SBNO1A3KN83 1393 aa23.84■■□□□ 1.41
SYNGR1-206ENST00000415332 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
SYNGR1-206ENST00000415332 CFAP70Q5T0N1 1121 aa23.84■■□□□ 1.41
SYNGR1-206ENST00000415332 KRT27Q7Z3Y8 459 aa23.84■■□□□ 1.41
SYNGR1-206ENST00000415332 LRP5O75197 1615 aa23.84■■□□□ 1.41
SYNGR1-206ENST00000415332 FAM83GA6ND36 823 aa23.83■■□□□ 1.41
SYNGR1-206ENST00000415332 PMFBP1Q8TBY8 1022 aa23.81■■□□□ 1.4
SYNGR1-206ENST00000415332 TRPM3Q9HCF6 1732 aaPredicted RBP23.81■■□□□ 1.4
SYNGR1-206ENST00000415332 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
SYNGR1-206ENST00000415332 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
SYNGR1-206ENST00000415332 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
SYNGR1-206ENST00000415332 PSDA5PKW4 1024 aaPredicted RBP23.79■■□□□ 1.4
SYNGR1-206ENST00000415332 A0A0G2JS52 829 aa23.77■■□□□ 1.4
SYNGR1-206ENST00000415332 MYT1Q01538 1121 aa23.77■■□□□ 1.4
SYNGR1-206ENST00000415332 FAM98CQ17RN3 349 aaKnown RBP23.77■■□□□ 1.4
SYNGR1-206ENST00000415332 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
SYNGR1-206ENST00000415332 BTG4Q9NY30 223 aa23.75■■□□□ 1.39
SYNGR1-206ENST00000415332 COL14A1Q05707 1796 aaKnown RBP23.74■■□□□ 1.39
SYNGR1-206ENST00000415332 FAM182BQ5T319 152 aa23.74■■□□□ 1.39
SYNGR1-206ENST00000415332 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
SYNGR1-206ENST00000415332 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
SYNGR1-206ENST00000415332 BAG6P46379 1132 aa23.73■■□□□ 1.39
SYNGR1-206ENST00000415332 ANKARQ7Z5J8 1434 aa23.73■■□□□ 1.39
SYNGR1-206ENST00000415332 RGPD1P0DJD0 1748 aa23.73■■□□□ 1.39
SYNGR1-206ENST00000415332 CRYBG1Q9Y4K1 1723 aa23.73■■□□□ 1.39
SYNGR1-206ENST00000415332 HRCP23327 699 aa23.72■■□□□ 1.39
SYNGR1-206ENST00000415332 POGKQ9P215 609 aa23.72■■□□□ 1.39
SYNGR1-206ENST00000415332 EN1Q05925 392 aaPredicted RBP23.71■■□□□ 1.39
SYNGR1-206ENST00000415332 HIRIP3Q9BW71 556 aaPredicted RBP23.71■■□□□ 1.39
SYNGR1-206ENST00000415332 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
SYNGR1-206ENST00000415332 ADGRB1O14514 1584 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms