RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 E9PCH4 1651 aa13.66□□□□□ -0.22
LINC01888-201ENST00000415138 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
LINC01888-201ENST00000415138 FBXO31Q5XUX0 539 aaPredicted RBP13.66□□□□□ -0.22
LINC01888-201ENST00000415138 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
LINC01888-201ENST00000415138 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
LINC01888-201ENST00000415138 TNRQ92752 1358 aa13.65□□□□□ -0.22
LINC01888-201ENST00000415138 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
LINC01888-201ENST00000415138 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
LINC01888-201ENST00000415138 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
LINC01888-201ENST00000415138 PKD2Q13563 968 aa13.64□□□□□ -0.23
LINC01888-201ENST00000415138 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
LINC01888-201ENST00000415138 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
LINC01888-201ENST00000415138 SPHKAPQ2M3C7 1700 aa13.62□□□□□ -0.23
LINC01888-201ENST00000415138 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
LINC01888-201ENST00000415138 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
LINC01888-201ENST00000415138 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
LINC01888-201ENST00000415138 POTEMA6NI47 508 aa13.61□□□□□ -0.23
LINC01888-201ENST00000415138 ECM2O94769 699 aaPredicted RBP13.61□□□□□ -0.23
LINC01888-201ENST00000415138 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
LINC01888-201ENST00000415138 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
LINC01888-201ENST00000415138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
LINC01888-201ENST00000415138 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
LINC01888-201ENST00000415138 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
LINC01888-201ENST00000415138 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
LINC01888-201ENST00000415138 G3V3G9 751 aa13.59□□□□□ -0.23
LINC01888-201ENST00000415138 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
LINC01888-201ENST00000415138 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
LINC01888-201ENST00000415138 NLRP1Q9C000 1473 aa13.59□□□□□ -0.23
LINC01888-201ENST00000415138 KIF1BO60333 1816 aa13.59□□□□□ -0.23
LINC01888-201ENST00000415138 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.24
LINC01888-201ENST00000415138 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
LINC01888-201ENST00000415138 ZNF142P52746 1687 aaPredicted RBP13.57□□□□□ -0.24
LINC01888-201ENST00000415138 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
LINC01888-201ENST00000415138 A2ML1A8K2U0 1454 aa13.56□□□□□ -0.24
LINC01888-201ENST00000415138 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
LINC01888-201ENST00000415138 NOS1P29475 1434 aa13.56□□□□□ -0.24
LINC01888-201ENST00000415138 SYNMO15061 1565 aa13.55□□□□□ -0.24
LINC01888-201ENST00000415138 PIK3C2BO00750 1634 aa13.55□□□□□ -0.24
LINC01888-201ENST00000415138 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
LINC01888-201ENST00000415138 IDI1Q13907 227 aa13.55□□□□□ -0.24
LINC01888-201ENST00000415138 UBR1Q8IWV7 1749 aa13.54□□□□□ -0.24
LINC01888-201ENST00000415138 HSPA2P54652 639 aa13.54□□□□□ -0.24
LINC01888-201ENST00000415138 MYO5BQ9ULV0 1848 aa13.54□□□□□ -0.24
LINC01888-201ENST00000415138 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
LINC01888-201ENST00000415138 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
LINC01888-201ENST00000415138 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
LINC01888-201ENST00000415138 LCE2DQ5TA82 110 aaPredicted RBP13.52□□□□□ -0.25
LINC01888-201ENST00000415138 EID1Q9Y6B2 187 aa13.52□□□□□ -0.25
LINC01888-201ENST00000415138 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
LINC01888-201ENST00000415138 PTPRTO14522 1441 aa13.52□□□□□ -0.25
LINC01888-201ENST00000415138 TRPM2O94759 1503 aa13.52□□□□□ -0.25
LINC01888-201ENST00000415138 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
LINC01888-201ENST00000415138 SNPHO15079 494 aa13.5□□□□□ -0.25
LINC01888-201ENST00000415138 SOX12O15370 315 aa13.5□□□□□ -0.25
LINC01888-201ENST00000415138 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
LINC01888-201ENST00000415138 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
LINC01888-201ENST00000415138 ADGRB3O60242 1522 aa13.49□□□□□ -0.25
LINC01888-201ENST00000415138 BCANQ96GW7 911 aa13.49□□□□□ -0.25
LINC01888-201ENST00000415138 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
LINC01888-201ENST00000415138 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
LINC01888-201ENST00000415138 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
LINC01888-201ENST00000415138 TMEM131LA2VDJ0 1609 aa13.48□□□□□ -0.25
LINC01888-201ENST00000415138 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
LINC01888-201ENST00000415138 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC01888-201ENST00000415138 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
LINC01888-201ENST00000415138 PKNOX2Q96KN3 472 aa13.46□□□□□ -0.25
LINC01888-201ENST00000415138 PODXL2Q9NZ53 605 aa13.46□□□□□ -0.25
LINC01888-201ENST00000415138 PLA2R1Q13018 1463 aa13.46□□□□□ -0.25
LINC01888-201ENST00000415138 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
LINC01888-201ENST00000415138 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
LINC01888-201ENST00000415138 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
LINC01888-201ENST00000415138 ST18O60284 1047 aa13.44□□□□□ -0.26
LINC01888-201ENST00000415138 STRCQ7RTU9 1775 aa13.44□□□□□ -0.26
LINC01888-201ENST00000415138 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
LINC01888-201ENST00000415138 TMEM2Q9UHN6 1383 aa13.44□□□□□ -0.26
LINC01888-201ENST00000415138 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
LINC01888-201ENST00000415138 STK25O00506 426 aa13.43□□□□□ -0.26
LINC01888-201ENST00000415138 RGL2O15211 777 aa13.43□□□□□ -0.26
LINC01888-201ENST00000415138 CCER1Q8TC90 406 aaPredicted RBP13.43□□□□□ -0.26
LINC01888-201ENST00000415138 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
LINC01888-201ENST00000415138 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
LINC01888-201ENST00000415138 ARXQ96QS3 562 aa13.42□□□□□ -0.26
LINC01888-201ENST00000415138 SLIT1O75093 1534 aa13.42□□□□□ -0.26
LINC01888-201ENST00000415138 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
LINC01888-201ENST00000415138 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
LINC01888-201ENST00000415138 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
LINC01888-201ENST00000415138 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
LINC01888-201ENST00000415138 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
LINC01888-201ENST00000415138 PPLO60437 1756 aa13.4□□□□□ -0.26
LINC01888-201ENST00000415138 NLRP6P59044 892 aa13.39□□□□□ -0.27
LINC01888-201ENST00000415138 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
LINC01888-201ENST00000415138 NEURL4Q96JN8 1562 aa13.38□□□□□ -0.27
LINC01888-201ENST00000415138 LTKP29376 864 aa13.38□□□□□ -0.27
LINC01888-201ENST00000415138 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
LINC01888-201ENST00000415138 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
LINC01888-201ENST00000415138 SIN3AQ96ST3 1273 aa13.37□□□□□ -0.27
LINC01888-201ENST00000415138 KDM2AQ9Y2K7 1162 aa13.37□□□□□ -0.27
LINC01888-201ENST00000415138 DCAF11Q8TEB1 546 aa13.36□□□□□ -0.27
LINC01888-201ENST00000415138 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
LINC01888-201ENST00000415138 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms