RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PLEKHH1Q9ULM0 1364 aa21.03■□□□□ 0.96
CHD1-202ENST00000414220 SAFB2Q14151 953 aaKnown RBP eCLIP21.03■□□□□ 0.96
CHD1-202ENST00000414220 CLSPNQ9HAW4 1339 aa21.03■□□□□ 0.96
CHD1-202ENST00000414220 NALCNQ8IZF0 1738 aa21.01■□□□□ 0.95
CHD1-202ENST00000414220 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
CHD1-202ENST00000414220 ESCO1Q5FWF5 840 aa21■□□□□ 0.95
CHD1-202ENST00000414220 KIAA1210Q9ULL0 1709 aa20.99■□□□□ 0.95
CHD1-202ENST00000414220 NBPF1Q3BBV0 1214 aa20.99■□□□□ 0.95
CHD1-202ENST00000414220 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
CHD1-202ENST00000414220 CCER1Q8TC90 406 aaPredicted RBP20.97■□□□□ 0.95
CHD1-202ENST00000414220 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
CHD1-202ENST00000414220 NUTM2FA1L443 756 aa20.96■□□□□ 0.95
CHD1-202ENST00000414220 ORAI2Q96SN7 254 aa20.96■□□□□ 0.95
CHD1-202ENST00000414220 TIMELESSQ9UNS1 1208 aa20.96■□□□□ 0.95
CHD1-202ENST00000414220 ROCK2O75116 1388 aaKnown RBP20.96■□□□□ 0.95
CHD1-202ENST00000414220 LRRC59Q96AG4 307 aaKnown RBP20.95■□□□□ 0.94
CHD1-202ENST00000414220 MINK1Q8N4C8 1332 aaPredicted RBP20.95■□□□□ 0.94
CHD1-202ENST00000414220 JCADQ9P266 1359 aa20.95■□□□□ 0.94
CHD1-202ENST00000414220 PHLPP1O60346 1717 aa20.93■□□□□ 0.94
CHD1-202ENST00000414220 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
CHD1-202ENST00000414220 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
CHD1-202ENST00000414220 WASLO00401 505 aaPredicted RBP20.92■□□□□ 0.94
CHD1-202ENST00000414220 DISP3Q9P2K9 1392 aa20.92■□□□□ 0.94
CHD1-202ENST00000414220 AHDC1Q5TGY3 1603 aaPredicted RBP20.92■□□□□ 0.94
CHD1-202ENST00000414220 CENPJQ9HC77 1338 aaPredicted RBP20.91■□□□□ 0.94
CHD1-202ENST00000414220 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
CHD1-202ENST00000414220 NBPF8Q3BBV2 869 aa20.89■□□□□ 0.93
CHD1-202ENST00000414220 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.93
CHD1-202ENST00000414220 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
CHD1-202ENST00000414220 ANKARQ7Z5J8 1434 aa20.87■□□□□ 0.93
CHD1-202ENST00000414220 SPATA31A6Q5VVP1 1343 aa20.87■□□□□ 0.93
CHD1-202ENST00000414220 FOXO3O43524 673 aa20.87■□□□□ 0.93
CHD1-202ENST00000414220 SOS2Q07890 1332 aaPredicted RBP20.86■□□□□ 0.93
CHD1-202ENST00000414220 PSME1Q06323 249 aa20.86■□□□□ 0.93
CHD1-202ENST00000414220 DDX17Q92841 729 aaKnown RBP20.86■□□□□ 0.93
CHD1-202ENST00000414220 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
CHD1-202ENST00000414220 FMN2Q9NZ56 1722 aa20.85■□□□□ 0.93
CHD1-202ENST00000414220 CDK19Q9BWU1 502 aa20.85■□□□□ 0.93
CHD1-202ENST00000414220 COL16A1Q07092 1604 aaPredicted RBP20.85■□□□□ 0.93
CHD1-202ENST00000414220 TRPM1Q7Z4N2 1603 aa20.85■□□□□ 0.93
CHD1-202ENST00000414220 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
CHD1-202ENST00000414220 NHSL1Q5SYE7 1610 aa20.83■□□□□ 0.93
CHD1-202ENST00000414220 GPRASP1Q5JY77 1395 aa20.83■□□□□ 0.92
CHD1-202ENST00000414220 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
CHD1-202ENST00000414220 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
CHD1-202ENST00000414220 KRT28Q7Z3Y7 464 aa20.81■□□□□ 0.92
CHD1-202ENST00000414220 NUDT16Q96DE0 195 aaKnown RBP20.81■□□□□ 0.92
CHD1-202ENST00000414220 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
CHD1-202ENST00000414220 EVC2Q86UK5 1308 aa20.8■□□□□ 0.92
CHD1-202ENST00000414220 TULP4Q9NRJ4 1543 aa20.8■□□□□ 0.92
CHD1-202ENST00000414220 NGDNQ8NEJ9 315 aaKnown RBP20.8■□□□□ 0.92
CHD1-202ENST00000414220 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
CHD1-202ENST00000414220 RALGAPBQ86X10 1494 aa20.8■□□□□ 0.92
CHD1-202ENST00000414220 KIF1AQ12756 1690 aa20.8■□□□□ 0.92
CHD1-202ENST00000414220 SLC24A1O60721 1099 aa20.79■□□□□ 0.92
CHD1-202ENST00000414220 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
CHD1-202ENST00000414220 NUTM2BA6NNL0 878 aaPredicted RBP20.78■□□□□ 0.92
CHD1-202ENST00000414220 NUTM2EB1AL46 878 aaPredicted RBP20.78■□□□□ 0.92
CHD1-202ENST00000414220 XPCQ01831 940 aaPredicted RBP20.78■□□□□ 0.92
CHD1-202ENST00000414220 NUTM2AQ8IVF1 878 aaPredicted RBP20.78■□□□□ 0.92
CHD1-202ENST00000414220 PNPLA6Q8IY17 1366 aa20.76■□□□□ 0.91
CHD1-202ENST00000414220 PRR36Q9H6K5 1346 aa20.76■□□□□ 0.91
CHD1-202ENST00000414220 SHPRHQ149N8 1683 aa20.74■□□□□ 0.91
CHD1-202ENST00000414220 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
CHD1-202ENST00000414220 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
CHD1-202ENST00000414220 PXDNQ92626 1479 aa20.73■□□□□ 0.91
CHD1-202ENST00000414220 SPATA31A3Q5VYP0 1347 aa20.73■□□□□ 0.91
CHD1-202ENST00000414220 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
CHD1-202ENST00000414220 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
CHD1-202ENST00000414220 HAP1P54257 671 aaPredicted RBP20.71■□□□□ 0.91
CHD1-202ENST00000414220 QRICH2Q9H0J4 1663 aa20.7■□□□□ 0.91
CHD1-202ENST00000414220 ATP7BP35670 1465 aa20.7■□□□□ 0.9
CHD1-202ENST00000414220 ARHGEF10O15013 1369 aa20.7■□□□□ 0.9
CHD1-202ENST00000414220 SBNO2Q9Y2G9 1366 aa20.7■□□□□ 0.9
CHD1-202ENST00000414220 USP32Q8NFA0 1604 aa20.69■□□□□ 0.9
CHD1-202ENST00000414220 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
CHD1-202ENST00000414220 ZNF772Q68DY9 489 aaPredicted RBP20.69■□□□□ 0.9
CHD1-202ENST00000414220 RGPD8O14715 1765 aaPredicted RBP20.69■□□□□ 0.9
CHD1-202ENST00000414220 ADAMTS2O95450 1211 aa20.68■□□□□ 0.9
CHD1-202ENST00000414220 ACEP12821 1306 aa20.68■□□□□ 0.9
CHD1-202ENST00000414220 TNS3Q68CZ2 1445 aa20.68■□□□□ 0.9
CHD1-202ENST00000414220 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
CHD1-202ENST00000414220 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
CHD1-202ENST00000414220 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
CHD1-202ENST00000414220 ST20-MTHFSA0A0A6YYL1 179 aa20.66■□□□□ 0.9
CHD1-202ENST00000414220 CABP1Q9NZU7 370 aa20.66■□□□□ 0.9
CHD1-202ENST00000414220 NGLY1Q96IV0 654 aa20.65■□□□□ 0.9
CHD1-202ENST00000414220 C8orf37Q96NL8 207 aa20.65■□□□□ 0.9
CHD1-202ENST00000414220 LRP6O75581 1613 aa20.64■□□□□ 0.9
CHD1-202ENST00000414220 POLR3AO14802 1390 aaPredicted RBP20.64■□□□□ 0.89
CHD1-202ENST00000414220 PUS7Q96PZ0 661 aaKnown RBP20.64■□□□□ 0.89
CHD1-202ENST00000414220 ZNF692Q9BU19 519 aaPredicted RBP20.64■□□□□ 0.89
CHD1-202ENST00000414220 USP47Q96K76 1375 aa20.63■□□□□ 0.89
CHD1-202ENST00000414220 BRD4O60885 1362 aaPredicted RBP20.62■□□□□ 0.89
CHD1-202ENST00000414220 TMF1P82094 1093 aa20.62■□□□□ 0.89
CHD1-202ENST00000414220 CDCA8Q53HL2 280 aa20.61■□□□□ 0.89
CHD1-202ENST00000414220 COL22A1Q8NFW1 1626 aaPredicted RBP20.6■□□□□ 0.89
CHD1-202ENST00000414220 AFF2P51816 1311 aa20.6■□□□□ 0.89
CHD1-202ENST00000414220 PLEKHG5O94827 1062 aa20.6■□□□□ 0.89
CHD1-202ENST00000414220 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms