RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FCF1Q9Y324 198 aaKnown RBP6.06□□□□□ -1.44
SF3B1-203ENST00000414174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.05□□□□□ -1.44
SF3B1-203ENST00000414174 GMPRP36959 345 aa6.05□□□□□ -1.44
SF3B1-203ENST00000414174 THAP11Q96EK4 314 aa6.05□□□□□ -1.44
SF3B1-203ENST00000414174 NXF1Q9UBU9 619 aaKnown RBP6.05□□□□□ -1.44
SF3B1-203ENST00000414174 SEMA3EO15041 775 aa6.04□□□□□ -1.44
SF3B1-203ENST00000414174 ZBTB24O43167 697 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-203ENST00000414174 PUS10Q3MIT2 529 aaKnown RBP6.04□□□□□ -1.44
SF3B1-203ENST00000414174 FAM160A2Q8N612 972 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-203ENST00000414174 IRF7Q92985 503 aa6.04□□□□□ -1.44
SF3B1-203ENST00000414174 SALL2Q9Y467 1007 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-203ENST00000414174 MORN1Q5T089 497 aa6.03□□□□□ -1.44
SF3B1-203ENST00000414174 FMNL1O95466 1100 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-203ENST00000414174 HAP1P54257 671 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-203ENST00000414174 J3QL48 77 aa6.01□□□□□ -1.45
SF3B1-203ENST00000414174 P3H3Q8IVL6 736 aa6.01□□□□□ -1.45
SF3B1-203ENST00000414174 TESPA1A2RU30 521 aaPredicted RBP6□□□□□ -1.45
SF3B1-203ENST00000414174 OATP04181 439 aa6□□□□□ -1.45
SF3B1-203ENST00000414174 HPS1Q92902 700 aa6□□□□□ -1.45
SF3B1-203ENST00000414174 MRGPRX2Q96LB1 330 aa6□□□□□ -1.45
SF3B1-203ENST00000414174 TPRNQ4KMQ1 711 aa5.99□□□□□ -1.45
SF3B1-203ENST00000414174 BRICD5Q6PL45 260 aa5.99□□□□□ -1.45
SF3B1-203ENST00000414174 REPIN1Q9BWE0 567 aaKnown RBP5.99□□□□□ -1.45
SF3B1-203ENST00000414174 PODXL2Q9NZ53 605 aa5.99□□□□□ -1.45
SF3B1-203ENST00000414174 H3BM21 787 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 GPR37O15354 613 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 ATP6V1AP38606 617 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 KCNMA1Q12791 1236 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 FAM161AQ3B820 660 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 MSS51Q4VC12 460 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 PXYLP1Q8TE99 480 aa5.98□□□□□ -1.45
SF3B1-203ENST00000414174 TRIM32Q13049 653 aa5.97□□□□□ -1.45
SF3B1-203ENST00000414174 SLC27A5Q9Y2P5 690 aa5.97□□□□□ -1.45
SF3B1-203ENST00000414174 RBM26Q5T8P6 1007 aaKnown RBP5.96□□□□□ -1.46
SF3B1-203ENST00000414174 GTF3C3Q9Y5Q9 886 aa5.96□□□□□ -1.46
SF3B1-203ENST00000414174 NUTM2FA1L443 756 aa5.94□□□□□ -1.46
SF3B1-203ENST00000414174 MMP16P51512 607 aa5.94□□□□□ -1.46
SF3B1-203ENST00000414174 FUT2Q10981 343 aa5.94□□□□□ -1.46
SF3B1-203ENST00000414174 PRDM9Q9NQV7 894 aa5.94□□□□□ -1.46
SF3B1-203ENST00000414174 ERBB4Q15303 1308 aa5.94□□□□□ -1.46
SF3B1-203ENST00000414174 FCHSD2O94868 740 aa5.93□□□□□ -1.46
SF3B1-203ENST00000414174 FECHP22830 423 aa5.93□□□□□ -1.46
SF3B1-203ENST00000414174 GSK3AP49840 483 aa5.93□□□□□ -1.46
SF3B1-203ENST00000414174 GCGRP47871 477 aa5.92□□□□□ -1.46
SF3B1-203ENST00000414174 WNT7BP56706 349 aa5.92□□□□□ -1.46
SF3B1-203ENST00000414174 RC3H1Q5TC82 1133 aaKnown RBP5.92□□□□□ -1.46
SF3B1-203ENST00000414174 METTL3Q86U44 580 aaKnown RBP5.92□□□□□ -1.46
SF3B1-203ENST00000414174 TRIM46Q7Z4K8 759 aa5.91□□□□□ -1.46
SF3B1-203ENST00000414174 VSIG10Q8N0Z9 540 aa5.91□□□□□ -1.46
SF3B1-203ENST00000414174 KCTD17Q8N5Z5 321 aa5.91□□□□□ -1.46
SF3B1-203ENST00000414174 VEGFBP49765 207 aa5.9□□□□□ -1.46
SF3B1-203ENST00000414174 GRIPAP1Q4V328 841 aa5.9□□□□□ -1.46
SF3B1-203ENST00000414174 RDH13Q8NBN7 331 aa5.9□□□□□ -1.46
SF3B1-203ENST00000414174 VSIG8P0DPA2 414 aa5.89□□□□□ -1.47
SF3B1-203ENST00000414174 SKOR1P84550 965 aa5.89□□□□□ -1.47
SF3B1-203ENST00000414174 Q3C1V9 767 aa5.89□□□□□ -1.47
SF3B1-203ENST00000414174 CAPN5O15484 640 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-203ENST00000414174 ALDH1A1P00352 501 aa5.88□□□□□ -1.47
SF3B1-203ENST00000414174 HIC1Q14526 733 aa5.88□□□□□ -1.47
SF3B1-203ENST00000414174 RNF19BQ6ZMZ0 732 aa5.88□□□□□ -1.47
SF3B1-203ENST00000414174 NPM2Q86SE8 214 aaKnown RBP5.88□□□□□ -1.47
SF3B1-203ENST00000414174 TMEM151AQ8N4L1 468 aa5.88□□□□□ -1.47
SF3B1-203ENST00000414174 SIAH2O43255 324 aa5.87□□□□□ -1.47
SF3B1-203ENST00000414174 DXOO77932 396 aaKnown RBP5.87□□□□□ -1.47
SF3B1-203ENST00000414174 SULF1Q8IWU6 871 aa5.87□□□□□ -1.47
SF3B1-203ENST00000414174 DDX11L8A8MPP1 907 aa5.86□□□□□ -1.47
SF3B1-203ENST00000414174 GNPATO15228 680 aa5.86□□□□□ -1.47
SF3B1-203ENST00000414174 NLRP7Q8WX94 980 aa5.86□□□□□ -1.47
SF3B1-203ENST00000414174 PHOX2BQ99453 314 aa5.86□□□□□ -1.47
SF3B1-203ENST00000414174 GDF11O95390 407 aa5.85□□□□□ -1.47
SF3B1-203ENST00000414174 BMP1P13497 986 aa5.85□□□□□ -1.47
SF3B1-203ENST00000414174 RASSF7Q02833 373 aa5.85□□□□□ -1.47
SF3B1-203ENST00000414174 ZFP42Q96MM3 310 aa5.85□□□□□ -1.47
SF3B1-203ENST00000414174 USB1Q9BQ65 265 aaKnown RBP5.85□□□□□ -1.47
SF3B1-203ENST00000414174 TMEM132AQ24JP5 1023 aa5.84□□□□□ -1.47
SF3B1-203ENST00000414174 SMYD5Q6GMV2 418 aa5.84□□□□□ -1.47
SF3B1-203ENST00000414174 GPIHBP1Q8IV16 184 aa5.83□□□□□ -1.48
SF3B1-203ENST00000414174 WASF2Q9Y6W5 498 aa5.83□□□□□ -1.48
SF3B1-203ENST00000414174 IGHA1P01876 353 aa5.82□□□□□ -1.48
SF3B1-203ENST00000414174 RNF225M0QZC1 329 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-203ENST00000414174 CCDC24Q8N4L8 307 aa5.81□□□□□ -1.48
SF3B1-203ENST00000414174 SCARF1Q14162 830 aa5.8□□□□□ -1.48
SF3B1-203ENST00000414174 EHBP1Q8NDI1 1231 aa5.8□□□□□ -1.48
SF3B1-203ENST00000414174 ADAMTS8Q9UP79 889 aa5.79□□□□□ -1.48
SF3B1-203ENST00000414174 MRPL14Q6P1L8 145 aaKnown RBP5.78□□□□□ -1.48
SF3B1-203ENST00000414174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.78□□□□□ -1.48
SF3B1-203ENST00000414174 C14orf37Q86TY3 774 aa5.78□□□□□ -1.48
SF3B1-203ENST00000414174 MPNDQ8N594 471 aa5.78□□□□□ -1.48
SF3B1-203ENST00000414174 PLEKHG3A1L390 1219 aa5.76□□□□□ -1.49
SF3B1-203ENST00000414174 USP46P62068 366 aa5.76□□□□□ -1.49
SF3B1-203ENST00000414174 FOXK2Q01167 660 aa5.76□□□□□ -1.49
SF3B1-203ENST00000414174 MAP2K5Q13163 448 aa5.76□□□□□ -1.49
SF3B1-203ENST00000414174 DNMT3AQ9Y6K1 912 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-203ENST00000414174 IRF6O14896 467 aa5.75□□□□□ -1.49
SF3B1-203ENST00000414174 PPFIA3O75145 1194 aa5.75□□□□□ -1.49
SF3B1-203ENST00000414174 KDM4AO75164 1064 aa5.75□□□□□ -1.49
SF3B1-203ENST00000414174 JUNDP17535 347 aa5.75□□□□□ -1.49
SF3B1-203ENST00000414174 XP32Q5T750 250 aa5.75□□□□□ -1.49
SF3B1-203ENST00000414174 PTCRAQ6ISU1 281 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-203ENST00000414174 PURBQ96QR8 312 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms