RNA–Protein interactions for RNA: ENST00000413587.5

ERGIC3-205, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 977 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-205ENST00000413587 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-205ENST00000413587 NUTM2AQ8IVF1 878 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-205ENST00000413587 NALCNQ8IZF0 1738 aa17.51■□□□□ 0.39
ERGIC3-205ENST00000413587 TMEM132EQ6IEE7 984 aa17.5■□□□□ 0.39
ERGIC3-205ENST00000413587 CFAP70Q5T0N1 1121 aa17.49■□□□□ 0.39
ERGIC3-205ENST00000413587 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
ERGIC3-205ENST00000413587 TECPR2O15040 1411 aa17.48■□□□□ 0.39
ERGIC3-205ENST00000413587 LRPPRCP42704 1394 aaKnown RBP17.48■□□□□ 0.39
ERGIC3-205ENST00000413587 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
ERGIC3-205ENST00000413587 ABCC11Q96J66 1382 aa17.48■□□□□ 0.39
ERGIC3-205ENST00000413587 UPF1Q92900 1129 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERGIC3-205ENST00000413587 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
ERGIC3-205ENST00000413587 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
ERGIC3-205ENST00000413587 AFF2P51816 1311 aa17.47■□□□□ 0.39
ERGIC3-205ENST00000413587 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
ERGIC3-205ENST00000413587 RXRBP28702 533 aa17.46■□□□□ 0.39
ERGIC3-205ENST00000413587 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.39
ERGIC3-205ENST00000413587 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
ERGIC3-205ENST00000413587 TONSLQ96HA7 1378 aa17.45■□□□□ 0.38
ERGIC3-205ENST00000413587 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
ERGIC3-205ENST00000413587 LAMC1P11047 1609 aa17.44■□□□□ 0.38
ERGIC3-205ENST00000413587 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
ERGIC3-205ENST00000413587 STK26Q9P289 416 aa17.44■□□□□ 0.38
ERGIC3-205ENST00000413587 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
ERGIC3-205ENST00000413587 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
ERGIC3-205ENST00000413587 PLEKHH1Q9ULM0 1364 aa17.43■□□□□ 0.38
ERGIC3-205ENST00000413587 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
ERGIC3-205ENST00000413587 ADGRB1O14514 1584 aa17.42■□□□□ 0.38
ERGIC3-205ENST00000413587 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
ERGIC3-205ENST00000413587 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
ERGIC3-205ENST00000413587 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
ERGIC3-205ENST00000413587 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
ERGIC3-205ENST00000413587 RGS12O14924 1447 aa17.38■□□□□ 0.37
ERGIC3-205ENST00000413587 KNDC1Q76NI1 1749 aa17.38■□□□□ 0.37
ERGIC3-205ENST00000413587 QTRT2Q9H974 415 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-205ENST00000413587 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
ERGIC3-205ENST00000413587 RBM6P78332 1123 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-205ENST00000413587 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
ERGIC3-205ENST00000413587 NGLY1Q96IV0 654 aa17.34■□□□□ 0.37
ERGIC3-205ENST00000413587 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
ERGIC3-205ENST00000413587 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.37
ERGIC3-205ENST00000413587 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
ERGIC3-205ENST00000413587 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
ERGIC3-205ENST00000413587 PXDNQ92626 1479 aa17.31■□□□□ 0.36
ERGIC3-205ENST00000413587 NBPF1Q3BBV0 1214 aa17.31■□□□□ 0.36
ERGIC3-205ENST00000413587 FNBP4Q8N3X1 1017 aaPredicted RBP17.31■□□□□ 0.36
ERGIC3-205ENST00000413587 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
ERGIC3-205ENST00000413587 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
ERGIC3-205ENST00000413587 USP21Q9UK80 565 aa17.29■□□□□ 0.36
ERGIC3-205ENST00000413587 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
ERGIC3-205ENST00000413587 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
ERGIC3-205ENST00000413587 ATRNO75882 1429 aa17.28■□□□□ 0.36
ERGIC3-205ENST00000413587 FOXO3O43524 673 aa17.27■□□□□ 0.36
ERGIC3-205ENST00000413587 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
ERGIC3-205ENST00000413587 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
ERGIC3-205ENST00000413587 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
ERGIC3-205ENST00000413587 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
ERGIC3-205ENST00000413587 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
ERGIC3-205ENST00000413587 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
ERGIC3-205ENST00000413587 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
ERGIC3-205ENST00000413587 POGKQ9P215 609 aa17.24■□□□□ 0.35
ERGIC3-205ENST00000413587 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
ERGIC3-205ENST00000413587 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-205ENST00000413587 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
ERGIC3-205ENST00000413587 SRCAPQ6ZRS2 3230 aa17.23■□□□□ 0.35
ERGIC3-205ENST00000413587 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
ERGIC3-205ENST00000413587 MINK1Q8N4C8 1332 aaPredicted RBP17.21■□□□□ 0.35
ERGIC3-205ENST00000413587 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
ERGIC3-205ENST00000413587 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
ERGIC3-205ENST00000413587 EP400Q96L91 3159 aa17.21■□□□□ 0.35
ERGIC3-205ENST00000413587 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
ERGIC3-205ENST00000413587 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
ERGIC3-205ENST00000413587 MARF1Q9Y4F3 1742 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-205ENST00000413587 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
ERGIC3-205ENST00000413587 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
ERGIC3-205ENST00000413587 TRPM1Q7Z4N2 1603 aa17.17■□□□□ 0.34
ERGIC3-205ENST00000413587 SLIT2O94813 1529 aa17.16■□□□□ 0.34
ERGIC3-205ENST00000413587 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-205ENST00000413587 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-205ENST00000413587 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
ERGIC3-205ENST00000413587 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
ERGIC3-205ENST00000413587 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
ERGIC3-205ENST00000413587 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
ERGIC3-205ENST00000413587 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-205ENST00000413587 TULP4Q9NRJ4 1543 aa17.14■□□□□ 0.33
ERGIC3-205ENST00000413587 GLI3P10071 1580 aa17.14■□□□□ 0.33
ERGIC3-205ENST00000413587 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
ERGIC3-205ENST00000413587 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
ERGIC3-205ENST00000413587 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
ERGIC3-205ENST00000413587 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.33
ERGIC3-205ENST00000413587 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
ERGIC3-205ENST00000413587 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-205ENST00000413587 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
ERGIC3-205ENST00000413587 ATP7BP35670 1465 aa17.12■□□□□ 0.33
ERGIC3-205ENST00000413587 NUDT16Q96DE0 195 aaKnown RBP17.11■□□□□ 0.33
ERGIC3-205ENST00000413587 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
ERGIC3-205ENST00000413587 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
ERGIC3-205ENST00000413587 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
ERGIC3-205ENST00000413587 EIF3AQ14152 1382 aaKnown RBP17.09■□□□□ 0.33
ERGIC3-205ENST00000413587 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms