RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 STK26Q9P289 416 aa11.35□□□□□ -0.59
HDAC9-207ENST00000413509 PARD3Q8TEW0 1356 aa11.35□□□□□ -0.59
HDAC9-207ENST00000413509 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
HDAC9-207ENST00000413509 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
HDAC9-207ENST00000413509 PLEKHH1Q9ULM0 1364 aa11.34□□□□□ -0.59
HDAC9-207ENST00000413509 PANK3Q9H999 370 aa11.34□□□□□ -0.59
HDAC9-207ENST00000413509 CHD2O14647 1828 aaKnown RBP11.33□□□□□ -0.6
HDAC9-207ENST00000413509 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-207ENST00000413509 PLPPR3Q6T4P5 718 aa11.33□□□□□ -0.6
HDAC9-207ENST00000413509 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
HDAC9-207ENST00000413509 ANKLE2Q86XL3 938 aa11.32□□□□□ -0.6
HDAC9-207ENST00000413509 RALBP1Q15311 655 aa11.31□□□□□ -0.6
HDAC9-207ENST00000413509 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-207ENST00000413509 POGKQ9P215 609 aa11.31□□□□□ -0.6
HDAC9-207ENST00000413509 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
HDAC9-207ENST00000413509 CD163L1Q9NR16 1453 aa11.31□□□□□ -0.6
HDAC9-207ENST00000413509 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-207ENST00000413509 WAPLQ7Z5K2 1190 aa11.3□□□□□ -0.6
HDAC9-207ENST00000413509 SLC26A8Q96RN1 970 aa11.3□□□□□ -0.6
HDAC9-207ENST00000413509 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
HDAC9-207ENST00000413509 ANKRD36BQ8N2N9 1353 aa11.29□□□□□ -0.6
HDAC9-207ENST00000413509 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
HDAC9-207ENST00000413509 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
HDAC9-207ENST00000413509 ATP7BP35670 1465 aa11.28□□□□□ -0.6
HDAC9-207ENST00000413509 SAFB2Q14151 953 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDAC9-207ENST00000413509 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
HDAC9-207ENST00000413509 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-207ENST00000413509 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.6
HDAC9-207ENST00000413509 WASLO00401 505 aaPredicted RBP11.27□□□□□ -0.61
HDAC9-207ENST00000413509 BCANQ96GW7 911 aa11.27□□□□□ -0.61
HDAC9-207ENST00000413509 CDK19Q9BWU1 502 aa11.27□□□□□ -0.61
HDAC9-207ENST00000413509 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
HDAC9-207ENST00000413509 AMOTL2Q9Y2J4 779 aa11.27□□□□□ -0.61
HDAC9-207ENST00000413509 CCDC184Q52MB2 194 aa11.26□□□□□ -0.61
HDAC9-207ENST00000413509 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
HDAC9-207ENST00000413509 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
HDAC9-207ENST00000413509 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
HDAC9-207ENST00000413509 CDC42BPGQ6DT37 1551 aa11.25□□□□□ -0.61
HDAC9-207ENST00000413509 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
HDAC9-207ENST00000413509 AKAP12Q02952 1782 aa11.25□□□□□ -0.61
HDAC9-207ENST00000413509 A0A1W2PP64 1363 aa11.25□□□□□ -0.61
HDAC9-207ENST00000413509 NSD2O96028 1365 aa11.25□□□□□ -0.61
HDAC9-207ENST00000413509 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
HDAC9-207ENST00000413509 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
HDAC9-207ENST00000413509 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
HDAC9-207ENST00000413509 NLRP13Q86W25 1043 aa11.24□□□□□ -0.61
HDAC9-207ENST00000413509 NALCNQ8IZF0 1738 aa11.23□□□□□ -0.61
HDAC9-207ENST00000413509 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
HDAC9-207ENST00000413509 KCNA6P17658 529 aa11.23□□□□□ -0.61
HDAC9-207ENST00000413509 NKTRP30414 1462 aaKnown RBP11.23□□□□□ -0.61
HDAC9-207ENST00000413509 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
HDAC9-207ENST00000413509 STRCQ7RTU9 1775 aa11.23□□□□□ -0.61
HDAC9-207ENST00000413509 INSRP06213 1382 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 ANKARQ7Z5J8 1434 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-207ENST00000413509 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 PRR36Q9H6K5 1346 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
HDAC9-207ENST00000413509 KIF20BQ96Q89 1820 aa11.21□□□□□ -0.61
HDAC9-207ENST00000413509 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.61
HDAC9-207ENST00000413509 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.61
HDAC9-207ENST00000413509 TERF2IPQ9NYB0 399 aa11.21□□□□□ -0.61
HDAC9-207ENST00000413509 ADGRL3Q9HAR2 1447 aa11.2□□□□□ -0.62
HDAC9-207ENST00000413509 CGNL1Q0VF96 1302 aa11.2□□□□□ -0.62
HDAC9-207ENST00000413509 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
HDAC9-207ENST00000413509 NUDT16Q96DE0 195 aaKnown RBP11.2□□□□□ -0.62
HDAC9-207ENST00000413509 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
HDAC9-207ENST00000413509 EDC4Q6P2E9 1401 aaKnown RBP11.19□□□□□ -0.62
HDAC9-207ENST00000413509 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
HDAC9-207ENST00000413509 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
HDAC9-207ENST00000413509 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-207ENST00000413509 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
HDAC9-207ENST00000413509 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
HDAC9-207ENST00000413509 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
HDAC9-207ENST00000413509 POLR3AO14802 1390 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-207ENST00000413509 HDGFL2Q7Z4V5 671 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-207ENST00000413509 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-207ENST00000413509 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
HDAC9-207ENST00000413509 NCOA3Q9Y6Q9 1424 aa11.17□□□□□ -0.62
HDAC9-207ENST00000413509 USP54Q70EL1 1684 aa11.15□□□□□ -0.62
HDAC9-207ENST00000413509 BLMP54132 1417 aaPredicted RBP11.15□□□□□ -0.62
HDAC9-207ENST00000413509 FYB1O15117 783 aa11.14□□□□□ -0.63
HDAC9-207ENST00000413509 HSPA2P54652 639 aa11.14□□□□□ -0.63
HDAC9-207ENST00000413509 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-207ENST00000413509 USP6P35125 1406 aa11.14□□□□□ -0.63
HDAC9-207ENST00000413509 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
HDAC9-207ENST00000413509 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
HDAC9-207ENST00000413509 DCCP43146 1447 aa11.13□□□□□ -0.63
HDAC9-207ENST00000413509 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-207ENST00000413509 MORC1Q86VD1 984 aa11.13□□□□□ -0.63
HDAC9-207ENST00000413509 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
HDAC9-207ENST00000413509 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
HDAC9-207ENST00000413509 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
HDAC9-207ENST00000413509 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-207ENST00000413509 ACEP12821 1306 aa11.11□□□□□ -0.63
HDAC9-207ENST00000413509 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
HDAC9-207ENST00000413509 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
HDAC9-207ENST00000413509 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms