RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 LOC105371045A0A1W2PR82 267 aa19.78■□□□□ 0.76
PCCA-204ENST00000413170 SF3B2Q13435 895 aaKnown RBP19.74■□□□□ 0.75
PCCA-204ENST00000413170 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
PCCA-204ENST00000413170 NUP155O75694 1391 aa19.72■□□□□ 0.75
PCCA-204ENST00000413170 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
PCCA-204ENST00000413170 PSDA5PKW4 1024 aaPredicted RBP19.72■□□□□ 0.75
PCCA-204ENST00000413170 GLI3P10071 1580 aa19.72■□□□□ 0.75
PCCA-204ENST00000413170 MARF1Q9Y4F3 1742 aaKnown RBP19.72■□□□□ 0.75
PCCA-204ENST00000413170 XPCQ01831 940 aaPredicted RBP19.71■□□□□ 0.75
PCCA-204ENST00000413170 NEXMIFQ5QGS0 1516 aa19.69■□□□□ 0.74
PCCA-204ENST00000413170 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PCCA-204ENST00000413170 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
PCCA-204ENST00000413170 PXDNQ92626 1479 aa19.68■□□□□ 0.74
PCCA-204ENST00000413170 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
PCCA-204ENST00000413170 UNC5CLQ8IV45 518 aa19.68■□□□□ 0.74
PCCA-204ENST00000413170 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
PCCA-204ENST00000413170 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
PCCA-204ENST00000413170 HRCP23327 699 aa19.66■□□□□ 0.74
PCCA-204ENST00000413170 SEPT12Q8IYM1 358 aa19.66■□□□□ 0.74
PCCA-204ENST00000413170 SLIT2O94813 1529 aa19.65■□□□□ 0.74
PCCA-204ENST00000413170 FOXO3O43524 673 aa19.64■□□□□ 0.73
PCCA-204ENST00000413170 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
PCCA-204ENST00000413170 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
PCCA-204ENST00000413170 ROCK1Q13464 1354 aa19.61■□□□□ 0.73
PCCA-204ENST00000413170 CDC42BPGQ6DT37 1551 aa19.6■□□□□ 0.73
PCCA-204ENST00000413170 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
PCCA-204ENST00000413170 BAG6P46379 1132 aa19.59■□□□□ 0.73
PCCA-204ENST00000413170 KRT27Q7Z3Y8 459 aa19.59■□□□□ 0.73
PCCA-204ENST00000413170 CCDC9Q9Y3X0 531 aaKnown RBP19.59■□□□□ 0.73
PCCA-204ENST00000413170 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
PCCA-204ENST00000413170 USP32Q8NFA0 1604 aa19.58■□□□□ 0.73
PCCA-204ENST00000413170 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
PCCA-204ENST00000413170 A0A0G2JS52 829 aa19.56■□□□□ 0.72
PCCA-204ENST00000413170 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
PCCA-204ENST00000413170 MYT1Q01538 1121 aa19.56■□□□□ 0.72
PCCA-204ENST00000413170 VPS72Q15906 364 aa19.56■□□□□ 0.72
PCCA-204ENST00000413170 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
PCCA-204ENST00000413170 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
PCCA-204ENST00000413170 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
PCCA-204ENST00000413170 NAIPQ13075 1403 aa19.53■□□□□ 0.72
PCCA-204ENST00000413170 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
PCCA-204ENST00000413170 ITGAEP38570 1179 aa19.53■□□□□ 0.72
PCCA-204ENST00000413170 EN1Q05925 392 aaPredicted RBP19.53■□□□□ 0.72
PCCA-204ENST00000413170 YY1P25490 414 aa19.52■□□□□ 0.72
PCCA-204ENST00000413170 KIF1BO60333 1816 aa19.52■□□□□ 0.72
PCCA-204ENST00000413170 PLCH1Q4KWH8 1693 aa19.52■□□□□ 0.71
PCCA-204ENST00000413170 ONECUT3O60422 494 aaPredicted RBP19.51■□□□□ 0.71
PCCA-204ENST00000413170 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
PCCA-204ENST00000413170 CCDC144AA2RUR9 1427 aa19.5■□□□□ 0.71
PCCA-204ENST00000413170 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
PCCA-204ENST00000413170 FAM182BQ5T319 152 aa19.47■□□□□ 0.71
PCCA-204ENST00000413170 KRT28Q7Z3Y7 464 aa19.47■□□□□ 0.71
PCCA-204ENST00000413170 NWD2Q9ULI1 1742 aa19.47■□□□□ 0.71
PCCA-204ENST00000413170 TNS3Q68CZ2 1445 aa19.46■□□□□ 0.71
PCCA-204ENST00000413170 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
PCCA-204ENST00000413170 STK26Q9P289 416 aa19.46■□□□□ 0.71
PCCA-204ENST00000413170 KIF1AQ12756 1690 aa19.45■□□□□ 0.7
PCCA-204ENST00000413170 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
PCCA-204ENST00000413170 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
PCCA-204ENST00000413170 PLEKHH1Q9ULM0 1364 aa19.43■□□□□ 0.7
PCCA-204ENST00000413170 EZH2Q15910 746 aaKnown RBP19.42■□□□□ 0.7
PCCA-204ENST00000413170 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
PCCA-204ENST00000413170 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
PCCA-204ENST00000413170 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
PCCA-204ENST00000413170 RPGRIP1LQ68CZ1 1315 aa19.41■□□□□ 0.7
PCCA-204ENST00000413170 PPLO60437 1756 aa19.41■□□□□ 0.7
PCCA-204ENST00000413170 DISP2A7MBM2 1401 aa19.4■□□□□ 0.7
PCCA-204ENST00000413170 TECPR2O15040 1411 aa19.39■□□□□ 0.69
PCCA-204ENST00000413170 NRAPQ86VF7 1730 aa19.39■□□□□ 0.69
PCCA-204ENST00000413170 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.69
PCCA-204ENST00000413170 PSME1Q06323 249 aa19.38■□□□□ 0.69
PCCA-204ENST00000413170 BTG4Q9NY30 223 aa19.37■□□□□ 0.69
PCCA-204ENST00000413170 PHF8Q9UPP1 1060 aa19.37■□□□□ 0.69
PCCA-204ENST00000413170 ARHGEF10O15013 1369 aa19.36■□□□□ 0.69
PCCA-204ENST00000413170 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
PCCA-204ENST00000413170 ADGRF5Q8IZF2 1346 aa19.35■□□□□ 0.69
PCCA-204ENST00000413170 ADGRB2O60241 1585 aa19.35■□□□□ 0.69
PCCA-204ENST00000413170 TMEM132EQ6IEE7 984 aa19.34■□□□□ 0.69
PCCA-204ENST00000413170 CAMKK2Q96RR4 588 aa19.34■□□□□ 0.69
PCCA-204ENST00000413170 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
PCCA-204ENST00000413170 KNDC1Q76NI1 1749 aa19.32■□□□□ 0.68
PCCA-204ENST00000413170 TRIM37O94972 964 aa19.32■□□□□ 0.68
PCCA-204ENST00000413170 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
PCCA-204ENST00000413170 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
PCCA-204ENST00000413170 RGPD8O14715 1765 aaPredicted RBP19.32■□□□□ 0.68
PCCA-204ENST00000413170 IFT172Q9UG01 1749 aa19.31■□□□□ 0.68
PCCA-204ENST00000413170 SPATA31A5Q5VU36 1347 aa19.31■□□□□ 0.68
PCCA-204ENST00000413170 SPATA31A7Q8IWB4 1347 aa19.31■□□□□ 0.68
PCCA-204ENST00000413170 THSD7AQ9UPZ6 1657 aa19.31■□□□□ 0.68
PCCA-204ENST00000413170 PPP1R1BQ9UD71 204 aaPredicted RBP19.31■□□□□ 0.68
PCCA-204ENST00000413170 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
PCCA-204ENST00000413170 APBA3O96018 575 aa19.29■□□□□ 0.68
PCCA-204ENST00000413170 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
PCCA-204ENST00000413170 YTHDC2Q9H6S0 1430 aaKnown RBP19.27■□□□□ 0.68
PCCA-204ENST00000413170 PMFBP1Q8TBY8 1022 aa19.27■□□□□ 0.68
PCCA-204ENST00000413170 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
PCCA-204ENST00000413170 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
PCCA-204ENST00000413170 SAFB2Q14151 953 aaKnown RBP eCLIP19.25■□□□□ 0.67
PCCA-204ENST00000413170 FAM196AQ6ZSG2 479 aa19.25■□□□□ 0.67
PCCA-204ENST00000413170 RREB1Q92766 1687 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms