RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SIN3AQ96ST3 1273 aa27.35■■□□□ 1.97
TRIM56-202ENST00000412507 KIAA1210Q9ULL0 1709 aa27.34■■□□□ 1.97
TRIM56-202ENST00000412507 FMN2Q9NZ56 1722 aa27.33■■□□□ 1.97
TRIM56-202ENST00000412507 RGPD8O14715 1765 aaPredicted RBP27.33■■□□□ 1.97
TRIM56-202ENST00000412507 SIRT1Q96EB6 747 aa27.33■■□□□ 1.97
TRIM56-202ENST00000412507 DLC1Q96QB1 1528 aa27.32■■□□□ 1.96
TRIM56-202ENST00000412507 SHPRHQ149N8 1683 aa27.3■■□□□ 1.96
TRIM56-202ENST00000412507 ARHGEF28Q8N1W1 1705 aaKnown RBP27.3■■□□□ 1.96
TRIM56-202ENST00000412507 JCADQ9P266 1359 aa27.28■■□□□ 1.96
TRIM56-202ENST00000412507 NEUROD1Q13562 356 aa27.28■■□□□ 1.96
TRIM56-202ENST00000412507 PRAM1Q96QH2 718 aa27.28■■□□□ 1.96
TRIM56-202ENST00000412507 TRAK1Q9UPV9 953 aa27.28■■□□□ 1.96
TRIM56-202ENST00000412507 SAFB2Q14151 953 aaKnown RBP eCLIP27.27■■□□□ 1.96
TRIM56-202ENST00000412507 DDX17Q92841 729 aaKnown RBP27.27■■□□□ 1.96
TRIM56-202ENST00000412507 ORAI2Q96SN7 254 aa27.27■■□□□ 1.96
TRIM56-202ENST00000412507 L3MBTL2Q969R5 705 aa27.25■■□□□ 1.95
TRIM56-202ENST00000412507 POGKQ9P215 609 aa27.25■■□□□ 1.95
TRIM56-202ENST00000412507 NUTM2FA1L443 756 aa27.24■■□□□ 1.95
TRIM56-202ENST00000412507 ILDR2Q71H61 639 aa27.22■■□□□ 1.95
TRIM56-202ENST00000412507 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
TRIM56-202ENST00000412507 ADGRB2O60241 1585 aa27.2■■□□□ 1.94
TRIM56-202ENST00000412507 ESCO1Q5FWF5 840 aa27.2■■□□□ 1.94
TRIM56-202ENST00000412507 KIF1AQ12756 1690 aa27.17■■□□□ 1.94
TRIM56-202ENST00000412507 TRPM1Q7Z4N2 1603 aa27.17■■□□□ 1.94
TRIM56-202ENST00000412507 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
TRIM56-202ENST00000412507 LRRC59Q96AG4 307 aaKnown RBP27.16■■□□□ 1.94
TRIM56-202ENST00000412507 USP32Q8NFA0 1604 aa27.16■■□□□ 1.94
TRIM56-202ENST00000412507 MINK1Q8N4C8 1332 aaPredicted RBP27.15■■□□□ 1.94
TRIM56-202ENST00000412507 HIRIP3Q9BW71 556 aaPredicted RBP27.14■■□□□ 1.94
TRIM56-202ENST00000412507 SPATA31A6Q5VVP1 1343 aa27.14■■□□□ 1.93
TRIM56-202ENST00000412507 LRP6O75581 1613 aa27.13■■□□□ 1.93
TRIM56-202ENST00000412507 SOS2Q07890 1332 aaPredicted RBP27.13■■□□□ 1.93
TRIM56-202ENST00000412507 FOXO3O43524 673 aa27.1■■□□□ 1.93
TRIM56-202ENST00000412507 NPHP3Q7Z494 1330 aa27.1■■□□□ 1.93
TRIM56-202ENST00000412507 PXDNQ92626 1479 aa27.09■■□□□ 1.93
TRIM56-202ENST00000412507 PNPLA6Q8IY17 1366 aa27.09■■□□□ 1.93
TRIM56-202ENST00000412507 RGS17Q9UGC6 210 aaPredicted RBP27.08■■□□□ 1.93
TRIM56-202ENST00000412507 XPCQ01831 940 aaPredicted RBP27.07■■□□□ 1.92
TRIM56-202ENST00000412507 QRICH2Q9H0J4 1663 aa27.06■■□□□ 1.92
TRIM56-202ENST00000412507 NUTM2BA6NNL0 878 aaPredicted RBP27.06■■□□□ 1.92
TRIM56-202ENST00000412507 NUTM2EB1AL46 878 aaPredicted RBP27.06■■□□□ 1.92
TRIM56-202ENST00000412507 NUTM2AQ8IVF1 878 aaPredicted RBP27.06■■□□□ 1.92
TRIM56-202ENST00000412507 PCGF6Q9BYE7 350 aa27.06■■□□□ 1.92
TRIM56-202ENST00000412507 ANKARQ7Z5J8 1434 aa27.06■■□□□ 1.92
TRIM56-202ENST00000412507 TULP4Q9NRJ4 1543 aa27.06■■□□□ 1.92
TRIM56-202ENST00000412507 ITSN1Q15811 1721 aa27.05■■□□□ 1.92
TRIM56-202ENST00000412507 WASLO00401 505 aaPredicted RBP27.04■■□□□ 1.92
TRIM56-202ENST00000412507 MEX3CQ5U5Q3 659 aaKnown RBP27.04■■□□□ 1.92
TRIM56-202ENST00000412507 PHF8Q9UPP1 1060 aa27.04■■□□□ 1.92
TRIM56-202ENST00000412507 TONSLQ96HA7 1378 aa27.04■■□□□ 1.92
TRIM56-202ENST00000412507 COL22A1Q8NFW1 1626 aaPredicted RBP27.04■■□□□ 1.92
TRIM56-202ENST00000412507 NBPF8Q3BBV2 869 aa27.02■■□□□ 1.92
TRIM56-202ENST00000412507 EIF3AQ14152 1382 aaKnown RBP27.01■■□□□ 1.91
TRIM56-202ENST00000412507 PRR36Q9H6K5 1346 aa27.01■■□□□ 1.91
TRIM56-202ENST00000412507 PMFBP1Q8TBY8 1022 aa26.99■■□□□ 1.91
TRIM56-202ENST00000412507 MARF1Q9Y4F3 1742 aaKnown RBP26.99■■□□□ 1.91
TRIM56-202ENST00000412507 ROCK2O75116 1388 aaKnown RBP26.98■■□□□ 1.91
TRIM56-202ENST00000412507 KRT28Q7Z3Y7 464 aa26.98■■□□□ 1.91
TRIM56-202ENST00000412507 CENPJQ9HC77 1338 aaPredicted RBP26.97■■□□□ 1.91
TRIM56-202ENST00000412507 TOPAZ1Q8N9V7 1692 aa26.96■■□□□ 1.91
TRIM56-202ENST00000412507 ATP7BP35670 1465 aa26.95■■□□□ 1.91
TRIM56-202ENST00000412507 POTEAQ6S8J7 498 aa26.95■■□□□ 1.9
TRIM56-202ENST00000412507 CDK19Q9BWU1 502 aa26.95■■□□□ 1.9
TRIM56-202ENST00000412507 TRPM3Q9HCF6 1732 aaPredicted RBP26.94■■□□□ 1.9
TRIM56-202ENST00000412507 NUDT16Q96DE0 195 aaKnown RBP26.93■■□□□ 1.9
TRIM56-202ENST00000412507 SPATA31A3Q5VYP0 1347 aa26.92■■□□□ 1.9
TRIM56-202ENST00000412507 PSME1Q06323 249 aa26.92■■□□□ 1.9
TRIM56-202ENST00000412507 GPRASP1Q5JY77 1395 aa26.91■■□□□ 1.9
TRIM56-202ENST00000412507 RALGAPBQ86X10 1494 aa26.9■■□□□ 1.9
TRIM56-202ENST00000412507 ADAMTS2O95450 1211 aa26.9■■□□□ 1.9
TRIM56-202ENST00000412507 TNS3Q68CZ2 1445 aa26.9■■□□□ 1.9
TRIM56-202ENST00000412507 SOCS7O14512 581 aa26.89■■□□□ 1.9
TRIM56-202ENST00000412507 C8orf37Q96NL8 207 aa26.89■■□□□ 1.9
TRIM56-202ENST00000412507 ALS2Q96Q42 1657 aa26.89■■□□□ 1.89
TRIM56-202ENST00000412507 ABCA3Q99758 1704 aa26.88■■□□□ 1.89
TRIM56-202ENST00000412507 SBNO1A3KN83 1393 aa26.87■■□□□ 1.89
TRIM56-202ENST00000412507 AFF2P51816 1311 aa26.87■■□□□ 1.89
TRIM56-202ENST00000412507 ZNF772Q68DY9 489 aaPredicted RBP26.86■■□□□ 1.89
TRIM56-202ENST00000412507 NGDNQ8NEJ9 315 aaKnown RBP26.86■■□□□ 1.89
TRIM56-202ENST00000412507 SRPK2P78362 688 aaKnown RBP26.85■■□□□ 1.89
TRIM56-202ENST00000412507 CARD11Q9BXL7 1154 aa26.85■■□□□ 1.89
TRIM56-202ENST00000412507 LMOD2Q6P5Q4 547 aa26.84■■□□□ 1.89
TRIM56-202ENST00000412507 CABP2Q9NPB3 220 aa26.83■■□□□ 1.89
TRIM56-202ENST00000412507 NGLY1Q96IV0 654 aa26.82■■□□□ 1.88
TRIM56-202ENST00000412507 CCDC61Q9Y6R9 512 aa26.82■■□□□ 1.88
TRIM56-202ENST00000412507 PLEKHG5O94827 1062 aa26.8■■□□□ 1.88
TRIM56-202ENST00000412507 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
TRIM56-202ENST00000412507 ARHGEF10O15013 1369 aa26.8■■□□□ 1.88
TRIM56-202ENST00000412507 CABLES1Q8TDN4 633 aa26.78■■□□□ 1.88
TRIM56-202ENST00000412507 ACEP12821 1306 aa26.78■■□□□ 1.88
TRIM56-202ENST00000412507 EVC2Q86UK5 1308 aa26.78■■□□□ 1.88
TRIM56-202ENST00000412507 PPIP5K1Q6PFW1 1433 aa26.78■■□□□ 1.88
TRIM56-202ENST00000412507 CRYBG1Q9Y4K1 1723 aa26.78■■□□□ 1.88
TRIM56-202ENST00000412507 POLR3AO14802 1390 aaPredicted RBP26.77■■□□□ 1.88
TRIM56-202ENST00000412507 PLEKHG3A1L390 1219 aa26.77■■□□□ 1.88
TRIM56-202ENST00000412507 PAK3O75914 559 aaPredicted RBP26.76■■□□□ 1.87
TRIM56-202ENST00000412507 HAP1P54257 671 aaPredicted RBP26.74■■□□□ 1.87
TRIM56-202ENST00000412507 PLCH1Q4KWH8 1693 aa26.73■■□□□ 1.87
TRIM56-202ENST00000412507 USP21Q9UK80 565 aa26.73■■□□□ 1.87
TRIM56-202ENST00000412507 AKAP12Q02952 1782 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms