RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 BRINP3Q76B58 766 aa25.5■■□□□ 1.67
HSPG2-204ENST00000412328 USP32Q8NFA0 1604 aa25.48■■□□□ 1.67
HSPG2-204ENST00000412328 DCAF11Q8TEB1 546 aa25.45■■□□□ 1.66
HSPG2-204ENST00000412328 KIF1AQ12756 1690 aa25.45■■□□□ 1.66
HSPG2-204ENST00000412328 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.66
HSPG2-204ENST00000412328 STK26Q9P289 416 aa25.43■■□□□ 1.66
HSPG2-204ENST00000412328 LRP6O75581 1613 aa25.43■■□□□ 1.66
HSPG2-204ENST00000412328 WAPLQ7Z5K2 1190 aa25.42■■□□□ 1.66
HSPG2-204ENST00000412328 SIRT1Q96EB6 747 aa25.42■■□□□ 1.66
HSPG2-204ENST00000412328 STAC3Q96MF2 364 aa25.42■■□□□ 1.66
HSPG2-204ENST00000412328 JCADQ9P266 1359 aa25.41■■□□□ 1.66
HSPG2-204ENST00000412328 COL22A1Q8NFW1 1626 aaPredicted RBP25.41■■□□□ 1.66
HSPG2-204ENST00000412328 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.66
HSPG2-204ENST00000412328 PXDNQ92626 1479 aa25.37■■□□□ 1.65
HSPG2-204ENST00000412328 ILDR2Q71H61 639 aa25.37■■□□□ 1.65
HSPG2-204ENST00000412328 KDM2AQ9Y2K7 1162 aa25.37■■□□□ 1.65
HSPG2-204ENST00000412328 TOPAZ1Q8N9V7 1692 aa25.34■■□□□ 1.65
HSPG2-204ENST00000412328 ITSN1Q15811 1721 aa25.33■■□□□ 1.65
HSPG2-204ENST00000412328 ORAI2Q96SN7 254 aa25.33■■□□□ 1.65
HSPG2-204ENST00000412328 QRICH2Q9H0J4 1663 aa25.32■■□□□ 1.64
HSPG2-204ENST00000412328 MARF1Q9Y4F3 1742 aaKnown RBP25.32■■□□□ 1.64
HSPG2-204ENST00000412328 DDX17Q92841 729 aaKnown RBP25.31■■□□□ 1.64
HSPG2-204ENST00000412328 PRAM1Q96QH2 718 aa25.31■■□□□ 1.64
HSPG2-204ENST00000412328 SIN3AQ96ST3 1273 aa25.3■■□□□ 1.64
HSPG2-204ENST00000412328 TULP4Q9NRJ4 1543 aa25.3■■□□□ 1.64
HSPG2-204ENST00000412328 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
HSPG2-204ENST00000412328 ABCA3Q99758 1704 aa25.29■■□□□ 1.64
HSPG2-204ENST00000412328 TRPM3Q9HCF6 1732 aaPredicted RBP25.29■■□□□ 1.64
HSPG2-204ENST00000412328 SOS2Q07890 1332 aaPredicted RBP25.29■■□□□ 1.64
HSPG2-204ENST00000412328 RGS17Q9UGC6 210 aaPredicted RBP25.28■■□□□ 1.64
HSPG2-204ENST00000412328 ANKARQ7Z5J8 1434 aa25.28■■□□□ 1.64
HSPG2-204ENST00000412328 SPATA31A6Q5VVP1 1343 aa25.27■■□□□ 1.64
HSPG2-204ENST00000412328 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
HSPG2-204ENST00000412328 TRAK1Q9UPV9 953 aa25.26■■□□□ 1.63
HSPG2-204ENST00000412328 ATP7BP35670 1465 aa25.23■■□□□ 1.63
HSPG2-204ENST00000412328 CRYBG1Q9Y4K1 1723 aa25.22■■□□□ 1.63
HSPG2-204ENST00000412328 ALS2Q96Q42 1657 aa25.22■■□□□ 1.63
HSPG2-204ENST00000412328 SAFB2Q14151 953 aaKnown RBP eCLIP25.21■■□□□ 1.63
HSPG2-204ENST00000412328 NBPF1Q3BBV0 1214 aa25.21■■□□□ 1.63
HSPG2-204ENST00000412328 NUTM2FA1L443 756 aa25.19■■□□□ 1.62
HSPG2-204ENST00000412328 ESCO1Q5FWF5 840 aa25.18■■□□□ 1.62
HSPG2-204ENST00000412328 LRRC59Q96AG4 307 aaKnown RBP25.18■■□□□ 1.62
HSPG2-204ENST00000412328 NPHP3Q7Z494 1330 aa25.17■■□□□ 1.62
HSPG2-204ENST00000412328 PRR36Q9H6K5 1346 aa25.17■■□□□ 1.62
HSPG2-204ENST00000412328 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
HSPG2-204ENST00000412328 POGKQ9P215 609 aa25.17■■□□□ 1.62
HSPG2-204ENST00000412328 MINK1Q8N4C8 1332 aaPredicted RBP25.15■■□□□ 1.62
HSPG2-204ENST00000412328 GPRASP1Q5JY77 1395 aa25.15■■□□□ 1.62
HSPG2-204ENST00000412328 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.62
HSPG2-204ENST00000412328 RALGAPBQ86X10 1494 aa25.14■■□□□ 1.61
HSPG2-204ENST00000412328 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
HSPG2-204ENST00000412328 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
HSPG2-204ENST00000412328 FOXO3O43524 673 aa25.11■■□□□ 1.61
HSPG2-204ENST00000412328 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.11■■□□□ 1.61
HSPG2-204ENST00000412328 TNS3Q68CZ2 1445 aa25.11■■□□□ 1.61
HSPG2-204ENST00000412328 WASLO00401 505 aaPredicted RBP25.1■■□□□ 1.61
HSPG2-204ENST00000412328 NBPF8Q3BBV2 869 aa25.09■■□□□ 1.61
HSPG2-204ENST00000412328 POTEAQ6S8J7 498 aa25.09■■□□□ 1.61
HSPG2-204ENST00000412328 PHF8Q9UPP1 1060 aa25.09■■□□□ 1.61
HSPG2-204ENST00000412328 XPCQ01831 940 aaPredicted RBP25.08■■□□□ 1.61
HSPG2-204ENST00000412328 PLCH1Q4KWH8 1693 aa25.07■■□□□ 1.6
HSPG2-204ENST00000412328 SPATA31A3Q5VYP0 1347 aa25.06■■□□□ 1.6
HSPG2-204ENST00000412328 PHRF1Q9P1Y6 1649 aaKnown RBP25.05■■□□□ 1.6
HSPG2-204ENST00000412328 SOCS7O14512 581 aa25.05■■□□□ 1.6
HSPG2-204ENST00000412328 SBNO1A3KN83 1393 aa25.05■■□□□ 1.6
HSPG2-204ENST00000412328 ROCK2O75116 1388 aaKnown RBP25.05■■□□□ 1.6
HSPG2-204ENST00000412328 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
HSPG2-204ENST00000412328 TONSLQ96HA7 1378 aa25.04■■□□□ 1.6
HSPG2-204ENST00000412328 AKAP12Q02952 1782 aa25.03■■□□□ 1.6
HSPG2-204ENST00000412328 NUTM2BA6NNL0 878 aaPredicted RBP25.02■■□□□ 1.6
HSPG2-204ENST00000412328 NUTM2EB1AL46 878 aaPredicted RBP25.02■■□□□ 1.6
HSPG2-204ENST00000412328 NUTM2AQ8IVF1 878 aaPredicted RBP25.02■■□□□ 1.6
HSPG2-204ENST00000412328 NWD2Q9ULI1 1742 aa25.01■■□□□ 1.59
HSPG2-204ENST00000412328 KRT28Q7Z3Y7 464 aa25■■□□□ 1.59
HSPG2-204ENST00000412328 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
HSPG2-204ENST00000412328 NRAPQ86VF7 1730 aa25■■□□□ 1.59
HSPG2-204ENST00000412328 MEX3CQ5U5Q3 659 aaKnown RBP24.99■■□□□ 1.59
HSPG2-204ENST00000412328 NRKQ7Z2Y5 1582 aa24.99■■□□□ 1.59
HSPG2-204ENST00000412328 PMFBP1Q8TBY8 1022 aa24.99■■□□□ 1.59
HSPG2-204ENST00000412328 AFF2P51816 1311 aa24.98■■□□□ 1.59
HSPG2-204ENST00000412328 SBNO2Q9Y2G9 1366 aa24.97■■□□□ 1.59
HSPG2-204ENST00000412328 CDK19Q9BWU1 502 aa24.97■■□□□ 1.59
HSPG2-204ENST00000412328 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
HSPG2-204ENST00000412328 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.59
HSPG2-204ENST00000412328 ARHGEF10O15013 1369 aa24.94■■□□□ 1.58
HSPG2-204ENST00000412328 CDK12Q9NYV4 1490 aaPredicted RBP24.94■■□□□ 1.58
HSPG2-204ENST00000412328 SLIT2O94813 1529 aa24.93■■□□□ 1.58
HSPG2-204ENST00000412328 ZNF772Q68DY9 489 aaPredicted RBP24.93■■□□□ 1.58
HSPG2-204ENST00000412328 C8orf37Q96NL8 207 aa24.93■■□□□ 1.58
HSPG2-204ENST00000412328 BCL9LQ86UU0 1499 aa24.93■■□□□ 1.58
HSPG2-204ENST00000412328 PPIP5K1Q6PFW1 1433 aa24.92■■□□□ 1.58
HSPG2-204ENST00000412328 PIK3C2AO00443 1686 aa24.91■■□□□ 1.58
HSPG2-204ENST00000412328 ADAMTS2O95450 1211 aa24.91■■□□□ 1.58
HSPG2-204ENST00000412328 COL14A1Q05707 1796 aaKnown RBP24.9■■□□□ 1.58
HSPG2-204ENST00000412328 ATRNO75882 1429 aa24.9■■□□□ 1.58
HSPG2-204ENST00000412328 PSME1Q06323 249 aa24.9■■□□□ 1.58
HSPG2-204ENST00000412328 PCGF6Q9BYE7 350 aa24.9■■□□□ 1.58
HSPG2-204ENST00000412328 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
HSPG2-204ENST00000412328 PLEKHG3A1L390 1219 aa24.88■■□□□ 1.57
HSPG2-204ENST00000412328 FNBP4Q8N3X1 1017 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms