RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 GLI3P10071 1580 aa16.44■□□□□ 0.22
CCDC148-203ENST00000409889 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
CCDC148-203ENST00000409889 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CCDC148-203ENST00000409889 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
CCDC148-203ENST00000409889 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
CCDC148-203ENST00000409889 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
CCDC148-203ENST00000409889 RALGAPBQ86X10 1494 aa16.4■□□□□ 0.22
CCDC148-203ENST00000409889 PXDNQ92626 1479 aa16.39■□□□□ 0.21
CCDC148-203ENST00000409889 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
CCDC148-203ENST00000409889 NUP155O75694 1391 aa16.38■□□□□ 0.21
CCDC148-203ENST00000409889 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
CCDC148-203ENST00000409889 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
CCDC148-203ENST00000409889 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
CCDC148-203ENST00000409889 ROBO2Q9HCK4 1378 aa16.37■□□□□ 0.21
CCDC148-203ENST00000409889 KIF1BO60333 1816 aa16.36■□□□□ 0.21
CCDC148-203ENST00000409889 SLIT2O94813 1529 aa16.36■□□□□ 0.21
CCDC148-203ENST00000409889 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
CCDC148-203ENST00000409889 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
CCDC148-203ENST00000409889 UNC5CLQ8IV45 518 aa16.34■□□□□ 0.21
CCDC148-203ENST00000409889 PRAG1Q86YV5 1406 aa16.34■□□□□ 0.21
CCDC148-203ENST00000409889 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
CCDC148-203ENST00000409889 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
CCDC148-203ENST00000409889 HRCP23327 699 aa16.32■□□□□ 0.2
CCDC148-203ENST00000409889 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
CCDC148-203ENST00000409889 ROCK1Q13464 1354 aa16.32■□□□□ 0.2
CCDC148-203ENST00000409889 PLCH1Q4KWH8 1693 aa16.32■□□□□ 0.2
CCDC148-203ENST00000409889 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
CCDC148-203ENST00000409889 SEPT12Q8IYM1 358 aa16.3■□□□□ 0.2
CCDC148-203ENST00000409889 NWD2Q9ULI1 1742 aa16.3■□□□□ 0.2
CCDC148-203ENST00000409889 FOXO3O43524 673 aa16.29■□□□□ 0.2
CCDC148-203ENST00000409889 RGPD1P0DJD0 1748 aa16.28■□□□□ 0.2
CCDC148-203ENST00000409889 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
CCDC148-203ENST00000409889 ABCA3Q99758 1704 aa16.26■□□□□ 0.19
CCDC148-203ENST00000409889 BAG6P46379 1132 aa16.26■□□□□ 0.19
CCDC148-203ENST00000409889 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
CCDC148-203ENST00000409889 KIF1AQ12756 1690 aa16.26■□□□□ 0.19
CCDC148-203ENST00000409889 PPLO60437 1756 aa16.25■□□□□ 0.19
CCDC148-203ENST00000409889 VPS72Q15906 364 aa16.24■□□□□ 0.19
CCDC148-203ENST00000409889 NAIPQ13075 1403 aa16.24■□□□□ 0.19
CCDC148-203ENST00000409889 SPATA31A3Q5VYP0 1347 aa16.23■□□□□ 0.19
CCDC148-203ENST00000409889 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
CCDC148-203ENST00000409889 CCDC9Q9Y3X0 531 aaKnown RBP16.23■□□□□ 0.19
CCDC148-203ENST00000409889 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
CCDC148-203ENST00000409889 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
CCDC148-203ENST00000409889 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
CCDC148-203ENST00000409889 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
CCDC148-203ENST00000409889 A0A0G2JS52 829 aa16.21■□□□□ 0.19
CCDC148-203ENST00000409889 ONECUT3O60422 494 aaPredicted RBP16.21■□□□□ 0.19
CCDC148-203ENST00000409889 MYT1Q01538 1121 aa16.21■□□□□ 0.19
CCDC148-203ENST00000409889 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
CCDC148-203ENST00000409889 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
CCDC148-203ENST00000409889 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
CCDC148-203ENST00000409889 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
CCDC148-203ENST00000409889 YY1P25490 414 aa16.19■□□□□ 0.18
CCDC148-203ENST00000409889 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
CCDC148-203ENST00000409889 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
CCDC148-203ENST00000409889 KNDC1Q76NI1 1749 aa16.17■□□□□ 0.18
CCDC148-203ENST00000409889 IFT172Q9UG01 1749 aa16.17■□□□□ 0.18
CCDC148-203ENST00000409889 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
CCDC148-203ENST00000409889 ITGAEP38570 1179 aa16.16■□□□□ 0.18
CCDC148-203ENST00000409889 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
CCDC148-203ENST00000409889 CABLES1Q8TDN4 633 aa16.16■□□□□ 0.18
CCDC148-203ENST00000409889 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
CCDC148-203ENST00000409889 TECPR2O15040 1411 aa16.15■□□□□ 0.18
CCDC148-203ENST00000409889 FAM98CQ17RN3 349 aaKnown RBP16.15■□□□□ 0.18
CCDC148-203ENST00000409889 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
CCDC148-203ENST00000409889 ADGRB2O60241 1585 aa16.14■□□□□ 0.17
CCDC148-203ENST00000409889 WAPLQ7Z5K2 1190 aa16.13■□□□□ 0.17
CCDC148-203ENST00000409889 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
CCDC148-203ENST00000409889 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
CCDC148-203ENST00000409889 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
CCDC148-203ENST00000409889 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
CCDC148-203ENST00000409889 EZH2Q15910 746 aaKnown RBP16.11■□□□□ 0.17
CCDC148-203ENST00000409889 STK26Q9P289 416 aa16.11■□□□□ 0.17
CCDC148-203ENST00000409889 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
CCDC148-203ENST00000409889 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
CCDC148-203ENST00000409889 RREB1Q92766 1687 aa16.1■□□□□ 0.17
CCDC148-203ENST00000409889 SBNO1A3KN83 1393 aa16.1■□□□□ 0.17
CCDC148-203ENST00000409889 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
CCDC148-203ENST00000409889 PSME1Q06323 249 aa16.09■□□□□ 0.17
CCDC148-203ENST00000409889 UTRNP46939 3433 aa16.09■□□□□ 0.17
CCDC148-203ENST00000409889 NRXN1Q9ULB1 1477 aa16.09■□□□□ 0.17
CCDC148-203ENST00000409889 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.17
CCDC148-203ENST00000409889 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
CCDC148-203ENST00000409889 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
CCDC148-203ENST00000409889 ABCC11Q96J66 1382 aa16.07■□□□□ 0.16
CCDC148-203ENST00000409889 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
CCDC148-203ENST00000409889 TRPM3Q9HCF6 1732 aaPredicted RBP16.06■□□□□ 0.16
CCDC148-203ENST00000409889 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
CCDC148-203ENST00000409889 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
CCDC148-203ENST00000409889 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
CCDC148-203ENST00000409889 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
CCDC148-203ENST00000409889 SPATA31A5Q5VU36 1347 aa16.04■□□□□ 0.16
CCDC148-203ENST00000409889 SPATA31A7Q8IWB4 1347 aa16.04■□□□□ 0.16
CCDC148-203ENST00000409889 CRYBG1Q9Y4K1 1723 aa16.04■□□□□ 0.16
CCDC148-203ENST00000409889 CAMTA1Q9Y6Y1 1673 aa16.04■□□□□ 0.16
CCDC148-203ENST00000409889 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
CCDC148-203ENST00000409889 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
CCDC148-203ENST00000409889 TRIM37O94972 964 aa16.02■□□□□ 0.16
CCDC148-203ENST00000409889 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms