RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.54
PDE6D-202ENST00000409772 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
PDE6D-202ENST00000409772 LRRC59Q96AG4 307 aaKnown RBP24.63■■□□□ 1.53
PDE6D-202ENST00000409772 AHDC1Q5TGY3 1603 aaPredicted RBP24.62■■□□□ 1.53
PDE6D-202ENST00000409772 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
PDE6D-202ENST00000409772 DLC1Q96QB1 1528 aa24.61■■□□□ 1.53
PDE6D-202ENST00000409772 ESCO1Q5FWF5 840 aa24.61■■□□□ 1.53
PDE6D-202ENST00000409772 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
PDE6D-202ENST00000409772 PLEKHH1Q9ULM0 1364 aa24.61■■□□□ 1.53
PDE6D-202ENST00000409772 ADGRB1O14514 1584 aa24.6■■□□□ 1.53
PDE6D-202ENST00000409772 CDC42BPGQ6DT37 1551 aa24.6■■□□□ 1.53
PDE6D-202ENST00000409772 ORAI2Q96SN7 254 aa24.59■■□□□ 1.53
PDE6D-202ENST00000409772 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
PDE6D-202ENST00000409772 SPATA31A6Q5VVP1 1343 aa24.58■■□□□ 1.52
PDE6D-202ENST00000409772 SAFB2Q14151 953 aaKnown RBP eCLIP24.57■■□□□ 1.52
PDE6D-202ENST00000409772 COL16A1Q07092 1604 aaPredicted RBP24.55■■□□□ 1.52
PDE6D-202ENST00000409772 NPHP3Q7Z494 1330 aa24.55■■□□□ 1.52
PDE6D-202ENST00000409772 KIAA1210Q9ULL0 1709 aa24.55■■□□□ 1.52
PDE6D-202ENST00000409772 NUTM2FA1L443 756 aa24.52■■□□□ 1.52
PDE6D-202ENST00000409772 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
PDE6D-202ENST00000409772 SOS2Q07890 1332 aaPredicted RBP24.51■■□□□ 1.51
PDE6D-202ENST00000409772 EIF3AQ14152 1382 aaKnown RBP24.51■■□□□ 1.51
PDE6D-202ENST00000409772 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
PDE6D-202ENST00000409772 DDX17Q92841 729 aaKnown RBP24.5■■□□□ 1.51
PDE6D-202ENST00000409772 FOXO3O43524 673 aa24.49■■□□□ 1.51
PDE6D-202ENST00000409772 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
PDE6D-202ENST00000409772 MINK1Q8N4C8 1332 aaPredicted RBP24.48■■□□□ 1.51
PDE6D-202ENST00000409772 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
PDE6D-202ENST00000409772 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
PDE6D-202ENST00000409772 FMN2Q9NZ56 1722 aa24.47■■□□□ 1.51
PDE6D-202ENST00000409772 HIRIP3Q9BW71 556 aaPredicted RBP24.46■■□□□ 1.51
PDE6D-202ENST00000409772 PHF8Q9UPP1 1060 aa24.46■■□□□ 1.51
PDE6D-202ENST00000409772 MEX3CQ5U5Q3 659 aaKnown RBP24.45■■□□□ 1.5
PDE6D-202ENST00000409772 SHPRHQ149N8 1683 aa24.45■■□□□ 1.5
PDE6D-202ENST00000409772 ANKARQ7Z5J8 1434 aa24.44■■□□□ 1.5
PDE6D-202ENST00000409772 PSME1Q06323 249 aa24.44■■□□□ 1.5
PDE6D-202ENST00000409772 ADGRB2O60241 1585 aa24.42■■□□□ 1.5
PDE6D-202ENST00000409772 NUTM2BA6NNL0 878 aaPredicted RBP24.41■■□□□ 1.5
PDE6D-202ENST00000409772 NUTM2EB1AL46 878 aaPredicted RBP24.41■■□□□ 1.5
PDE6D-202ENST00000409772 NUTM2AQ8IVF1 878 aaPredicted RBP24.41■■□□□ 1.5
PDE6D-202ENST00000409772 ROCK2O75116 1388 aaKnown RBP24.41■■□□□ 1.5
PDE6D-202ENST00000409772 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
PDE6D-202ENST00000409772 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
PDE6D-202ENST00000409772 KRT28Q7Z3Y7 464 aa24.4■■□□□ 1.5
PDE6D-202ENST00000409772 PNPLA6Q8IY17 1366 aa24.4■■□□□ 1.5
PDE6D-202ENST00000409772 KIF1AQ12756 1690 aa24.4■■□□□ 1.5
PDE6D-202ENST00000409772 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.5
PDE6D-202ENST00000409772 CDK19Q9BWU1 502 aa24.38■■□□□ 1.49
PDE6D-202ENST00000409772 ZNF772Q68DY9 489 aaPredicted RBP24.36■■□□□ 1.49
PDE6D-202ENST00000409772 PXDNQ92626 1479 aa24.35■■□□□ 1.49
PDE6D-202ENST00000409772 XPCQ01831 940 aaPredicted RBP24.35■■□□□ 1.49
PDE6D-202ENST00000409772 PMFBP1Q8TBY8 1022 aa24.35■■□□□ 1.49
PDE6D-202ENST00000409772 NUDT16Q96DE0 195 aaKnown RBP24.35■■□□□ 1.49
PDE6D-202ENST00000409772 RGS17Q9UGC6 210 aaPredicted RBP24.35■■□□□ 1.49
PDE6D-202ENST00000409772 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
PDE6D-202ENST00000409772 TULP4Q9NRJ4 1543 aa24.35■■□□□ 1.49
PDE6D-202ENST00000409772 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
PDE6D-202ENST00000409772 TRPM1Q7Z4N2 1603 aa24.34■■□□□ 1.49
PDE6D-202ENST00000409772 GPRASP1Q5JY77 1395 aa24.33■■□□□ 1.49
PDE6D-202ENST00000409772 NGDNQ8NEJ9 315 aaKnown RBP24.33■■□□□ 1.49
PDE6D-202ENST00000409772 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.49
PDE6D-202ENST00000409772 RGPD8O14715 1765 aaPredicted RBP24.33■■□□□ 1.49
PDE6D-202ENST00000409772 SPATA31A3Q5VYP0 1347 aa24.33■■□□□ 1.48
PDE6D-202ENST00000409772 CARD11Q9BXL7 1154 aa24.32■■□□□ 1.48
PDE6D-202ENST00000409772 LRP6O75581 1613 aa24.31■■□□□ 1.48
PDE6D-202ENST00000409772 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
PDE6D-202ENST00000409772 SRPK2P78362 688 aaKnown RBP24.3■■□□□ 1.48
PDE6D-202ENST00000409772 SBNO1A3KN83 1393 aa24.29■■□□□ 1.48
PDE6D-202ENST00000409772 NGLY1Q96IV0 654 aa24.28■■□□□ 1.48
PDE6D-202ENST00000409772 EVC2Q86UK5 1308 aa24.28■■□□□ 1.48
PDE6D-202ENST00000409772 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
PDE6D-202ENST00000409772 ADAMTS2O95450 1211 aa24.27■■□□□ 1.48
PDE6D-202ENST00000409772 ARHGEF10O15013 1369 aa24.27■■□□□ 1.48
PDE6D-202ENST00000409772 LMOD2Q6P5Q4 547 aa24.26■■□□□ 1.47
PDE6D-202ENST00000409772 C8orf37Q96NL8 207 aa24.26■■□□□ 1.47
PDE6D-202ENST00000409772 PLEKHG3A1L390 1219 aa24.25■■□□□ 1.47
PDE6D-202ENST00000409772 SLC24A1O60721 1099 aa24.25■■□□□ 1.47
PDE6D-202ENST00000409772 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
PDE6D-202ENST00000409772 COL22A1Q8NFW1 1626 aaPredicted RBP24.24■■□□□ 1.47
PDE6D-202ENST00000409772 HAP1P54257 671 aaPredicted RBP24.24■■□□□ 1.47
PDE6D-202ENST00000409772 TNS3Q68CZ2 1445 aa24.24■■□□□ 1.47
PDE6D-202ENST00000409772 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
PDE6D-202ENST00000409772 AFF2P51816 1311 aa24.23■■□□□ 1.47
PDE6D-202ENST00000409772 ATP7BP35670 1465 aa24.23■■□□□ 1.47
PDE6D-202ENST00000409772 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
PDE6D-202ENST00000409772 RALGAPBQ86X10 1494 aa24.22■■□□□ 1.47
PDE6D-202ENST00000409772 CABP2Q9NPB3 220 aa24.22■■□□□ 1.47
PDE6D-202ENST00000409772 ACEP12821 1306 aa24.2■■□□□ 1.46
PDE6D-202ENST00000409772 PAK3O75914 559 aaPredicted RBP24.2■■□□□ 1.46
PDE6D-202ENST00000409772 QRICH2Q9H0J4 1663 aa24.2■■□□□ 1.46
PDE6D-202ENST00000409772 POLR3AO14802 1390 aaPredicted RBP24.18■■□□□ 1.46
PDE6D-202ENST00000409772 RXRBP28702 533 aa24.18■■□□□ 1.46
PDE6D-202ENST00000409772 FNBP4Q8N3X1 1017 aaPredicted RBP24.18■■□□□ 1.46
PDE6D-202ENST00000409772 QTRT2Q9H974 415 aaKnown RBP24.18■■□□□ 1.46
PDE6D-202ENST00000409772 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
PDE6D-202ENST00000409772 USP21Q9UK80 565 aa24.16■■□□□ 1.46
PDE6D-202ENST00000409772 CABP1Q9NZU7 370 aa24.15■■□□□ 1.46
PDE6D-202ENST00000409772 PPIP5K1Q6PFW1 1433 aa24.15■■□□□ 1.46
PDE6D-202ENST00000409772 BRD4O60885 1362 aaPredicted RBP24.15■■□□□ 1.46
PDE6D-202ENST00000409772 ZNF692Q9BU19 519 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms