RNA–Protein interactions for RNA: ENST00000409741.5

SLC3A1-207, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-207ENST00000409741 PTCH1Q13635 1447 aa17.03■□□□□ 0.32
SLC3A1-207ENST00000409741 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
SLC3A1-207ENST00000409741 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
SLC3A1-207ENST00000409741 TULP4Q9NRJ4 1543 aa17.01■□□□□ 0.31
SLC3A1-207ENST00000409741 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
SLC3A1-207ENST00000409741 EVC2Q86UK5 1308 aa17■□□□□ 0.31
SLC3A1-207ENST00000409741 CDCA8Q53HL2 280 aa17■□□□□ 0.31
SLC3A1-207ENST00000409741 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
SLC3A1-207ENST00000409741 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
SLC3A1-207ENST00000409741 CABP2Q9NPB3 220 aa16.97■□□□□ 0.31
SLC3A1-207ENST00000409741 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
SLC3A1-207ENST00000409741 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.96■□□□□ 0.31
SLC3A1-207ENST00000409741 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.3
SLC3A1-207ENST00000409741 POTEDQ86YR6 584 aa16.96■□□□□ 0.3
SLC3A1-207ENST00000409741 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
SLC3A1-207ENST00000409741 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
SLC3A1-207ENST00000409741 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
SLC3A1-207ENST00000409741 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
SLC3A1-207ENST00000409741 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
SLC3A1-207ENST00000409741 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
SLC3A1-207ENST00000409741 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
SLC3A1-207ENST00000409741 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
SLC3A1-207ENST00000409741 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
SLC3A1-207ENST00000409741 PANK3Q9H999 370 aa16.91■□□□□ 0.3
SLC3A1-207ENST00000409741 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
SLC3A1-207ENST00000409741 MYOM1P52179 1685 aa16.9■□□□□ 0.3
SLC3A1-207ENST00000409741 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
SLC3A1-207ENST00000409741 NUTM2FA1L443 756 aa16.88■□□□□ 0.29
SLC3A1-207ENST00000409741 PRR36Q9H6K5 1346 aa16.88■□□□□ 0.29
SLC3A1-207ENST00000409741 TMEM94Q12767 1356 aa16.88■□□□□ 0.29
SLC3A1-207ENST00000409741 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
SLC3A1-207ENST00000409741 C14orf37Q86TY3 774 aa16.87■□□□□ 0.29
SLC3A1-207ENST00000409741 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
SLC3A1-207ENST00000409741 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
SLC3A1-207ENST00000409741 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
SLC3A1-207ENST00000409741 ATP7BP35670 1465 aa16.85■□□□□ 0.29
SLC3A1-207ENST00000409741 PER1O15534 1290 aaPredicted RBP16.84■□□□□ 0.29
SLC3A1-207ENST00000409741 MIER1Q8N108 512 aa16.84■□□□□ 0.29
SLC3A1-207ENST00000409741 CDC42BPGQ6DT37 1551 aa16.83■□□□□ 0.29
SLC3A1-207ENST00000409741 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.29
SLC3A1-207ENST00000409741 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.28
SLC3A1-207ENST00000409741 CARD14Q9BXL6 1004 aa16.83■□□□□ 0.28
SLC3A1-207ENST00000409741 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
SLC3A1-207ENST00000409741 PPIP5K1Q6PFW1 1433 aa16.82■□□□□ 0.28
SLC3A1-207ENST00000409741 NCOA3Q9Y6Q9 1424 aa16.82■□□□□ 0.28
SLC3A1-207ENST00000409741 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
SLC3A1-207ENST00000409741 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
SLC3A1-207ENST00000409741 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
SLC3A1-207ENST00000409741 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
SLC3A1-207ENST00000409741 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
SLC3A1-207ENST00000409741 A0A1W2PP64 1363 aa16.8■□□□□ 0.28
SLC3A1-207ENST00000409741 ANP32CO43423 234 aa16.8■□□□□ 0.28
SLC3A1-207ENST00000409741 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
SLC3A1-207ENST00000409741 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
SLC3A1-207ENST00000409741 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
SLC3A1-207ENST00000409741 KNSTRNQ9Y448 316 aa16.79■□□□□ 0.28
SLC3A1-207ENST00000409741 NSD3Q9BZ95 1437 aa16.78■□□□□ 0.28
SLC3A1-207ENST00000409741 PLEKHG3A1L390 1219 aa16.77■□□□□ 0.28
SLC3A1-207ENST00000409741 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.28
SLC3A1-207ENST00000409741 TOPAZ1Q8N9V7 1692 aa16.77■□□□□ 0.28
SLC3A1-207ENST00000409741 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
SLC3A1-207ENST00000409741 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
SLC3A1-207ENST00000409741 PMFBP1Q8TBY8 1022 aa16.76■□□□□ 0.27
SLC3A1-207ENST00000409741 MSH6P52701 1360 aa16.76■□□□□ 0.27
SLC3A1-207ENST00000409741 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
SLC3A1-207ENST00000409741 ATF3P18847 181 aa16.75■□□□□ 0.27
SLC3A1-207ENST00000409741 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
SLC3A1-207ENST00000409741 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
SLC3A1-207ENST00000409741 ACEP12821 1306 aa16.75■□□□□ 0.27
SLC3A1-207ENST00000409741 DCCP43146 1447 aa16.75■□□□□ 0.27
SLC3A1-207ENST00000409741 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
SLC3A1-207ENST00000409741 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
SLC3A1-207ENST00000409741 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
SLC3A1-207ENST00000409741 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
SLC3A1-207ENST00000409741 ESCO1Q5FWF5 840 aa16.73■□□□□ 0.27
SLC3A1-207ENST00000409741 CADPS2Q86UW7 1296 aa16.73■□□□□ 0.27
SLC3A1-207ENST00000409741 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
SLC3A1-207ENST00000409741 MST1RQ04912 1400 aa16.73■□□□□ 0.27
SLC3A1-207ENST00000409741 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
SLC3A1-207ENST00000409741 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
SLC3A1-207ENST00000409741 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
SLC3A1-207ENST00000409741 ITSN1Q15811 1721 aa16.71■□□□□ 0.27
SLC3A1-207ENST00000409741 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
SLC3A1-207ENST00000409741 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
SLC3A1-207ENST00000409741 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
SLC3A1-207ENST00000409741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
SLC3A1-207ENST00000409741 PARD3Q8TEW0 1356 aa16.69■□□□□ 0.26
SLC3A1-207ENST00000409741 EDC4Q6P2E9 1401 aaKnown RBP16.69■□□□□ 0.26
SLC3A1-207ENST00000409741 USP6P35125 1406 aa16.68■□□□□ 0.26
SLC3A1-207ENST00000409741 RALBP1Q15311 655 aa16.68■□□□□ 0.26
SLC3A1-207ENST00000409741 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
SLC3A1-207ENST00000409741 FYB1O15117 783 aa16.67■□□□□ 0.26
SLC3A1-207ENST00000409741 MON2Q7Z3U7 1717 aa16.67■□□□□ 0.26
SLC3A1-207ENST00000409741 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
SLC3A1-207ENST00000409741 TTC21BQ7Z4L5 1316 aa16.66■□□□□ 0.26
SLC3A1-207ENST00000409741 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
SLC3A1-207ENST00000409741 NME9Q86XW9 330 aa16.65■□□□□ 0.26
SLC3A1-207ENST00000409741 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
SLC3A1-207ENST00000409741 FOXO3O43524 673 aa16.65■□□□□ 0.26
SLC3A1-207ENST00000409741 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms