RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 CFAP70Q5T0N1 1121 aa26.26■■□□□ 1.79
ITM2C-204ENST00000409704 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
ITM2C-204ENST00000409704 SPATA31A6Q5VVP1 1343 aa26.23■■□□□ 1.79
ITM2C-204ENST00000409704 WAPLQ7Z5K2 1190 aa26.23■■□□□ 1.79
ITM2C-204ENST00000409704 SOCS7O14512 581 aa26.22■■□□□ 1.79
ITM2C-204ENST00000409704 DCAF11Q8TEB1 546 aa26.2■■□□□ 1.78
ITM2C-204ENST00000409704 RGS17Q9UGC6 210 aaPredicted RBP26.2■■□□□ 1.78
ITM2C-204ENST00000409704 ADGRB2O60241 1585 aa26.2■■□□□ 1.78
ITM2C-204ENST00000409704 DDX17Q92841 729 aaKnown RBP26.19■■□□□ 1.78
ITM2C-204ENST00000409704 KIF1AQ12756 1690 aa26.19■■□□□ 1.78
ITM2C-204ENST00000409704 ORAI2Q96SN7 254 aa26.18■■□□□ 1.78
ITM2C-204ENST00000409704 ARHGEF28Q8N1W1 1705 aaKnown RBP26.17■■□□□ 1.78
ITM2C-204ENST00000409704 KIAA1210Q9ULL0 1709 aa26.17■■□□□ 1.78
ITM2C-204ENST00000409704 SIRT1Q96EB6 747 aa26.17■■□□□ 1.78
ITM2C-204ENST00000409704 STAC3Q96MF2 364 aa26.17■■□□□ 1.78
ITM2C-204ENST00000409704 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
ITM2C-204ENST00000409704 PNPLA6Q8IY17 1366 aa26.16■■□□□ 1.78
ITM2C-204ENST00000409704 RGPD8O14715 1765 aaPredicted RBP26.13■■□□□ 1.77
ITM2C-204ENST00000409704 COL22A1Q8NFW1 1626 aaPredicted RBP26.13■■□□□ 1.77
ITM2C-204ENST00000409704 SOS2Q07890 1332 aaPredicted RBP26.13■■□□□ 1.77
ITM2C-204ENST00000409704 PXDNQ92626 1479 aa26.12■■□□□ 1.77
ITM2C-204ENST00000409704 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
ITM2C-204ENST00000409704 PRAM1Q96QH2 718 aa26.11■■□□□ 1.77
ITM2C-204ENST00000409704 USP32Q8NFA0 1604 aa26.1■■□□□ 1.77
ITM2C-204ENST00000409704 ESCO1Q5FWF5 840 aa26.09■■□□□ 1.77
ITM2C-204ENST00000409704 NUTM2FA1L443 756 aa26.08■■□□□ 1.77
ITM2C-204ENST00000409704 MEX3CQ5U5Q3 659 aaKnown RBP26.08■■□□□ 1.77
ITM2C-204ENST00000409704 NPHP3Q7Z494 1330 aa26.08■■□□□ 1.77
ITM2C-204ENST00000409704 SAFB2Q14151 953 aaKnown RBP eCLIP26.06■■□□□ 1.76
ITM2C-204ENST00000409704 POTEAQ6S8J7 498 aa26.06■■□□□ 1.76
ITM2C-204ENST00000409704 TRAK1Q9UPV9 953 aa26.06■■□□□ 1.76
ITM2C-204ENST00000409704 NUTM2BA6NNL0 878 aaPredicted RBP26.04■■□□□ 1.76
ITM2C-204ENST00000409704 NUTM2EB1AL46 878 aaPredicted RBP26.04■■□□□ 1.76
ITM2C-204ENST00000409704 NUTM2AQ8IVF1 878 aaPredicted RBP26.04■■□□□ 1.76
ITM2C-204ENST00000409704 POGKQ9P215 609 aa26.04■■□□□ 1.76
ITM2C-204ENST00000409704 ANKARQ7Z5J8 1434 aa26.04■■□□□ 1.76
ITM2C-204ENST00000409704 TULP4Q9NRJ4 1543 aa26.02■■□□□ 1.76
ITM2C-204ENST00000409704 MARF1Q9Y4F3 1742 aaKnown RBP26■■□□□ 1.75
ITM2C-204ENST00000409704 FOXO3O43524 673 aa25.99■■□□□ 1.75
ITM2C-204ENST00000409704 ITSN1Q15811 1721 aa25.98■■□□□ 1.75
ITM2C-204ENST00000409704 EIF3AQ14152 1382 aaKnown RBP25.97■■□□□ 1.75
ITM2C-204ENST00000409704 TRPM1Q7Z4N2 1603 aa25.97■■□□□ 1.75
ITM2C-204ENST00000409704 XPCQ01831 940 aaPredicted RBP25.97■■□□□ 1.75
ITM2C-204ENST00000409704 MINK1Q8N4C8 1332 aaPredicted RBP25.96■■□□□ 1.75
ITM2C-204ENST00000409704 ZNF772Q68DY9 489 aaPredicted RBP25.95■■□□□ 1.74
ITM2C-204ENST00000409704 HIRIP3Q9BW71 556 aaPredicted RBP25.95■■□□□ 1.74
ITM2C-204ENST00000409704 PHF8Q9UPP1 1060 aa25.94■■□□□ 1.74
ITM2C-204ENST00000409704 ABCA3Q99758 1704 aa25.94■■□□□ 1.74
ITM2C-204ENST00000409704 AFF2P51816 1311 aa25.93■■□□□ 1.74
ITM2C-204ENST00000409704 SIN3AQ96ST3 1273 aa25.93■■□□□ 1.74
ITM2C-204ENST00000409704 TRPM3Q9HCF6 1732 aaPredicted RBP25.93■■□□□ 1.74
ITM2C-204ENST00000409704 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
ITM2C-204ENST00000409704 ATP7BP35670 1465 aa25.92■■□□□ 1.74
ITM2C-204ENST00000409704 TNS3Q68CZ2 1445 aa25.92■■□□□ 1.74
ITM2C-204ENST00000409704 QRICH2Q9H0J4 1663 aa25.91■■□□□ 1.74
ITM2C-204ENST00000409704 L3MBTL2Q969R5 705 aa25.91■■□□□ 1.74
ITM2C-204ENST00000409704 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
ITM2C-204ENST00000409704 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
ITM2C-204ENST00000409704 C8orf37Q96NL8 207 aa25.9■■□□□ 1.74
ITM2C-204ENST00000409704 SPATA31A3Q5VYP0 1347 aa25.89■■□□□ 1.74
ITM2C-204ENST00000409704 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.74
ITM2C-204ENST00000409704 NBPF1Q3BBV0 1214 aa25.89■■□□□ 1.74
ITM2C-204ENST00000409704 ADAMTS2O95450 1211 aa25.88■■□□□ 1.73
ITM2C-204ENST00000409704 KRT28Q7Z3Y7 464 aa25.87■■□□□ 1.73
ITM2C-204ENST00000409704 ALS2Q96Q42 1657 aa25.87■■□□□ 1.73
ITM2C-204ENST00000409704 SBNO1A3KN83 1393 aa25.86■■□□□ 1.73
ITM2C-204ENST00000409704 NEUROD1Q13562 356 aa25.85■■□□□ 1.73
ITM2C-204ENST00000409704 CDK12Q9NYV4 1490 aaPredicted RBP25.85■■□□□ 1.73
ITM2C-204ENST00000409704 PMFBP1Q8TBY8 1022 aa25.84■■□□□ 1.73
ITM2C-204ENST00000409704 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.83■■□□□ 1.73
ITM2C-204ENST00000409704 PSME1Q06323 249 aa25.81■■□□□ 1.72
ITM2C-204ENST00000409704 NGLY1Q96IV0 654 aa25.81■■□□□ 1.72
ITM2C-204ENST00000409704 ARHGEF10O15013 1369 aa25.81■■□□□ 1.72
ITM2C-204ENST00000409704 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
ITM2C-204ENST00000409704 PLCH1Q4KWH8 1693 aa25.79■■□□□ 1.72
ITM2C-204ENST00000409704 CENPJQ9HC77 1338 aaPredicted RBP25.79■■□□□ 1.72
ITM2C-204ENST00000409704 RXRBP28702 533 aa25.78■■□□□ 1.72
ITM2C-204ENST00000409704 ROCK2O75116 1388 aaKnown RBP25.77■■□□□ 1.72
ITM2C-204ENST00000409704 GPRASP1Q5JY77 1395 aa25.77■■□□□ 1.72
ITM2C-204ENST00000409704 RGS12O14924 1447 aa25.77■■□□□ 1.72
ITM2C-204ENST00000409704 FNBP4Q8N3X1 1017 aaPredicted RBP25.76■■□□□ 1.71
ITM2C-204ENST00000409704 ATRNO75882 1429 aa25.76■■□□□ 1.71
ITM2C-204ENST00000409704 NUDT16Q96DE0 195 aaKnown RBP25.75■■□□□ 1.71
ITM2C-204ENST00000409704 CDK19Q9BWU1 502 aa25.75■■□□□ 1.71
ITM2C-204ENST00000409704 USP21Q9UK80 565 aa25.75■■□□□ 1.71
ITM2C-204ENST00000409704 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
ITM2C-204ENST00000409704 SLIT2O94813 1529 aa25.73■■□□□ 1.71
ITM2C-204ENST00000409704 BCL9LQ86UU0 1499 aa25.73■■□□□ 1.71
ITM2C-204ENST00000409704 QTRT2Q9H974 415 aaKnown RBP25.73■■□□□ 1.71
ITM2C-204ENST00000409704 RALGAPBQ86X10 1494 aa25.72■■□□□ 1.71
ITM2C-204ENST00000409704 TONSLQ96HA7 1378 aa25.72■■□□□ 1.71
ITM2C-204ENST00000409704 PHRF1Q9P1Y6 1649 aaKnown RBP25.72■■□□□ 1.71
ITM2C-204ENST00000409704 POLR3AO14802 1390 aaPredicted RBP25.71■■□□□ 1.71
ITM2C-204ENST00000409704 RBM6P78332 1123 aaKnown RBP25.71■■□□□ 1.71
ITM2C-204ENST00000409704 NGDNQ8NEJ9 315 aaKnown RBP25.71■■□□□ 1.71
ITM2C-204ENST00000409704 NBPF8Q3BBV2 869 aa25.7■■□□□ 1.7
ITM2C-204ENST00000409704 LMOD2Q6P5Q4 547 aa25.7■■□□□ 1.7
ITM2C-204ENST00000409704 CABLES1Q8TDN4 633 aa25.69■■□□□ 1.7
ITM2C-204ENST00000409704 TRPC5Q9UL62 973 aaPredicted RBP25.69■■□□□ 1.7
ITM2C-204ENST00000409704 NRAPQ86VF7 1730 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms