RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
POLR1A-203ENST00000409681 BECN1Q14457 450 aa12.75□□□□□ -0.37
POLR1A-203ENST00000409681 RWDD1Q9H446 243 aaPredicted RBP12.75□□□□□ -0.37
POLR1A-203ENST00000409681 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
POLR1A-203ENST00000409681 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
POLR1A-203ENST00000409681 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
POLR1A-203ENST00000409681 MTHFSP49914 203 aa12.74□□□□□ -0.37
POLR1A-203ENST00000409681 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
POLR1A-203ENST00000409681 FGD1P98174 961 aa12.74□□□□□ -0.37
POLR1A-203ENST00000409681 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
POLR1A-203ENST00000409681 HMOX1P09601 288 aa12.73□□□□□ -0.37
POLR1A-203ENST00000409681 TSPYL4Q9UJ04 414 aa12.72□□□□□ -0.37
POLR1A-203ENST00000409681 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
POLR1A-203ENST00000409681 ABCA8O94911 1581 aa12.72□□□□□ -0.37
POLR1A-203ENST00000409681 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
POLR1A-203ENST00000409681 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
POLR1A-203ENST00000409681 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
POLR1A-203ENST00000409681 APAF1O14727 1248 aa12.71□□□□□ -0.37
POLR1A-203ENST00000409681 MCCP23508 829 aa12.71□□□□□ -0.37
POLR1A-203ENST00000409681 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.37
POLR1A-203ENST00000409681 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.38
POLR1A-203ENST00000409681 HSPA2P54652 639 aa12.7□□□□□ -0.38
POLR1A-203ENST00000409681 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
POLR1A-203ENST00000409681 FOXO3O43524 673 aa12.7□□□□□ -0.38
POLR1A-203ENST00000409681 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
POLR1A-203ENST00000409681 NGLY1Q96IV0 654 aa12.7□□□□□ -0.38
POLR1A-203ENST00000409681 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
POLR1A-203ENST00000409681 NPHP3Q7Z494 1330 aa12.7□□□□□ -0.38
POLR1A-203ENST00000409681 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
POLR1A-203ENST00000409681 SCAF11Q99590 1463 aaKnown RBP12.69□□□□□ -0.38
POLR1A-203ENST00000409681 RGS3P49796 1198 aa12.69□□□□□ -0.38
POLR1A-203ENST00000409681 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
POLR1A-203ENST00000409681 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
POLR1A-203ENST00000409681 TBX22Q9Y458 520 aa12.69□□□□□ -0.38
POLR1A-203ENST00000409681 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
POLR1A-203ENST00000409681 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
POLR1A-203ENST00000409681 ELL2O00472 640 aaPredicted RBP12.68□□□□□ -0.38
POLR1A-203ENST00000409681 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
POLR1A-203ENST00000409681 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
POLR1A-203ENST00000409681 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
POLR1A-203ENST00000409681 CABP4P57796 275 aa12.68□□□□□ -0.38
POLR1A-203ENST00000409681 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
POLR1A-203ENST00000409681 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
POLR1A-203ENST00000409681 RPRD2Q5VT52 1461 aaKnown RBP12.67□□□□□ -0.38
POLR1A-203ENST00000409681 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
POLR1A-203ENST00000409681 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
POLR1A-203ENST00000409681 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
POLR1A-203ENST00000409681 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
POLR1A-203ENST00000409681 APBB1O00213 710 aa12.66□□□□□ -0.38
POLR1A-203ENST00000409681 NCLP19338 710 aaKnown RBP12.66□□□□□ -0.38
POLR1A-203ENST00000409681 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
POLR1A-203ENST00000409681 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
POLR1A-203ENST00000409681 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
POLR1A-203ENST00000409681 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
POLR1A-203ENST00000409681 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
POLR1A-203ENST00000409681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.65□□□□□ -0.39
POLR1A-203ENST00000409681 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
POLR1A-203ENST00000409681 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
POLR1A-203ENST00000409681 FKBP5Q13451 457 aaPredicted RBP12.64□□□□□ -0.39
POLR1A-203ENST00000409681 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
POLR1A-203ENST00000409681 DNMT1P26358 1616 aaKnown RBP12.63□□□□□ -0.39
POLR1A-203ENST00000409681 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
POLR1A-203ENST00000409681 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
POLR1A-203ENST00000409681 RIC3Q7Z5B4 369 aa12.63□□□□□ -0.39
POLR1A-203ENST00000409681 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
POLR1A-203ENST00000409681 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
POLR1A-203ENST00000409681 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
POLR1A-203ENST00000409681 MYO5CQ9NQX4 1742 aa12.63□□□□□ -0.39
POLR1A-203ENST00000409681 KCNA6P17658 529 aa12.62□□□□□ -0.39
POLR1A-203ENST00000409681 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
POLR1A-203ENST00000409681 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
POLR1A-203ENST00000409681 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
POLR1A-203ENST00000409681 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
POLR1A-203ENST00000409681 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
POLR1A-203ENST00000409681 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
POLR1A-203ENST00000409681 NAP1L2Q9ULW6 460 aaPredicted RBP12.61□□□□□ -0.39
POLR1A-203ENST00000409681 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
POLR1A-203ENST00000409681 NSD2O96028 1365 aa12.61□□□□□ -0.39
POLR1A-203ENST00000409681 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
POLR1A-203ENST00000409681 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
POLR1A-203ENST00000409681 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
POLR1A-203ENST00000409681 FCHSD2O94868 740 aa12.6□□□□□ -0.39
POLR1A-203ENST00000409681 TCP11L2Q8N4U5 519 aa12.6□□□□□ -0.39
POLR1A-203ENST00000409681 NOL10Q9BSC4 688 aaKnown RBP12.6□□□□□ -0.39
POLR1A-203ENST00000409681 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
POLR1A-203ENST00000409681 NECTIN2Q92692 538 aa12.59□□□□□ -0.39
POLR1A-203ENST00000409681 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
POLR1A-203ENST00000409681 ACEP12821 1306 aa12.59□□□□□ -0.39
POLR1A-203ENST00000409681 EXOC5O00471 708 aa12.59□□□□□ -0.39
POLR1A-203ENST00000409681 MAGI3Q5TCQ9 1506 aa12.59□□□□□ -0.39
POLR1A-203ENST00000409681 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
POLR1A-203ENST00000409681 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
POLR1A-203ENST00000409681 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
POLR1A-203ENST00000409681 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
POLR1A-203ENST00000409681 MAST1Q9Y2H9 1570 aa12.58□□□□□ -0.4
POLR1A-203ENST00000409681 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
POLR1A-203ENST00000409681 NME9Q86XW9 330 aa12.57□□□□□ -0.4
POLR1A-203ENST00000409681 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
POLR1A-203ENST00000409681 ZRSR1Q15695 479 aaKnown RBP12.57□□□□□ -0.4
POLR1A-203ENST00000409681 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms