RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 PTCH1Q13635 1447 aa23.45■■□□□ 1.34
SSB-202ENST00000409333 NWD1Q149M9 1564 aa23.45■■□□□ 1.34
SSB-202ENST00000409333 STRCP1A6NGW2 1772 aa23.44■■□□□ 1.34
SSB-202ENST00000409333 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
SSB-202ENST00000409333 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
SSB-202ENST00000409333 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
SSB-202ENST00000409333 KCNA6P17658 529 aa23.4■■□□□ 1.34
SSB-202ENST00000409333 SLC24A1O60721 1099 aa23.39■■□□□ 1.33
SSB-202ENST00000409333 ADGRB2O60241 1585 aa23.38■■□□□ 1.33
SSB-202ENST00000409333 NALCNQ8IZF0 1738 aa23.38■■□□□ 1.33
SSB-202ENST00000409333 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
SSB-202ENST00000409333 CDCA8Q53HL2 280 aa23.35■■□□□ 1.33
SSB-202ENST00000409333 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
SSB-202ENST00000409333 CABP2Q9NPB3 220 aa23.31■■□□□ 1.32
SSB-202ENST00000409333 RGPD8O14715 1765 aaPredicted RBP23.3■■□□□ 1.32
SSB-202ENST00000409333 SRPK2P78362 688 aaKnown RBP23.29■■□□□ 1.32
SSB-202ENST00000409333 CDK19Q9BWU1 502 aa23.29■■□□□ 1.32
SSB-202ENST00000409333 XIRP1Q702N8 1843 aaKnown RBP23.29■■□□□ 1.32
SSB-202ENST00000409333 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.32
SSB-202ENST00000409333 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
SSB-202ENST00000409333 RBM33Q96EV2 1170 aaKnown RBP23.27■■□□□ 1.32
SSB-202ENST00000409333 TOPAZ1Q8N9V7 1692 aa23.25■■□□□ 1.31
SSB-202ENST00000409333 USP32Q8NFA0 1604 aa23.25■■□□□ 1.31
SSB-202ENST00000409333 PUS7Q96PZ0 661 aaKnown RBP23.25■■□□□ 1.31
SSB-202ENST00000409333 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
SSB-202ENST00000409333 ITSN1Q15811 1721 aa23.23■■□□□ 1.31
SSB-202ENST00000409333 ADGRL3Q9HAR2 1447 aa23.23■■□□□ 1.31
SSB-202ENST00000409333 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
SSB-202ENST00000409333 ATP7BP35670 1465 aa23.22■■□□□ 1.31
SSB-202ENST00000409333 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
SSB-202ENST00000409333 ZNF335Q9H4Z2 1342 aaPredicted RBP23.21■■□□□ 1.31
SSB-202ENST00000409333 PANK3Q9H999 370 aa23.21■■□□□ 1.31
SSB-202ENST00000409333 PROSER2Q86WR7 435 aaPredicted RBP23.2■■□□□ 1.3
SSB-202ENST00000409333 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
SSB-202ENST00000409333 SLC12A5Q9H2X9 1139 aa23.19■■□□□ 1.3
SSB-202ENST00000409333 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
SSB-202ENST00000409333 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
SSB-202ENST00000409333 PRR36Q9H6K5 1346 aa23.18■■□□□ 1.3
SSB-202ENST00000409333 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
SSB-202ENST00000409333 NINLQ9Y2I6 1382 aa23.17■■□□□ 1.3
SSB-202ENST00000409333 NUDT16Q96DE0 195 aaKnown RBP23.16■■□□□ 1.3
SSB-202ENST00000409333 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
SSB-202ENST00000409333 CD163L1Q9NR16 1453 aa23.15■■□□□ 1.3
SSB-202ENST00000409333 LRRC7Q96NW7 1537 aa23.15■■□□□ 1.3
SSB-202ENST00000409333 NUTM2FA1L443 756 aa23.15■■□□□ 1.3
SSB-202ENST00000409333 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
SSB-202ENST00000409333 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.3
SSB-202ENST00000409333 MIER1Q8N108 512 aa23.14■■□□□ 1.3
SSB-202ENST00000409333 MON2Q7Z3U7 1717 aa23.13■■□□□ 1.29
SSB-202ENST00000409333 ANKRD36BQ8N2N9 1353 aa23.13■■□□□ 1.29
SSB-202ENST00000409333 CABP1Q9NZU7 370 aa23.12■■□□□ 1.29
SSB-202ENST00000409333 A0A1W2PP64 1363 aa23.12■■□□□ 1.29
SSB-202ENST00000409333 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
SSB-202ENST00000409333 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
SSB-202ENST00000409333 ANKARQ7Z5J8 1434 aa23.11■■□□□ 1.29
SSB-202ENST00000409333 CARD14Q9BXL6 1004 aa23.1■■□□□ 1.29
SSB-202ENST00000409333 ANP32CO43423 234 aa23.09■■□□□ 1.29
SSB-202ENST00000409333 NSD3Q9BZ95 1437 aa23.09■■□□□ 1.29
SSB-202ENST00000409333 KIF20BQ96Q89 1820 aa23.08■■□□□ 1.29
SSB-202ENST00000409333 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
SSB-202ENST00000409333 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
SSB-202ENST00000409333 LTBP4Q8N2S1 1624 aa23.07■■□□□ 1.28
SSB-202ENST00000409333 KNSTRNQ9Y448 316 aa23.06■■□□□ 1.28
SSB-202ENST00000409333 DCCP43146 1447 aa23.06■■□□□ 1.28
SSB-202ENST00000409333 TERF2IPQ9NYB0 399 aa23.06■■□□□ 1.28
SSB-202ENST00000409333 NRKQ7Z2Y5 1582 aa23.06■■□□□ 1.28
SSB-202ENST00000409333 CPSF1Q10570 1443 aaKnown RBP23.05■■□□□ 1.28
SSB-202ENST00000409333 PRKRIP1Q9H875 184 aaPredicted RBP23.04■■□□□ 1.28
SSB-202ENST00000409333 ANKRD26Q9UPS8 1709 aa23.04■■□□□ 1.28
SSB-202ENST00000409333 MSH6P52701 1360 aa23.03■■□□□ 1.28
SSB-202ENST00000409333 AMER1Q5JTC6 1135 aaPredicted RBP23.03■■□□□ 1.28
SSB-202ENST00000409333 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
SSB-202ENST00000409333 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
SSB-202ENST00000409333 PLEKHG3A1L390 1219 aa23.01■■□□□ 1.27
SSB-202ENST00000409333 MST1RQ04912 1400 aa23.01■■□□□ 1.27
SSB-202ENST00000409333 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
SSB-202ENST00000409333 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
SSB-202ENST00000409333 ACEP12821 1306 aa23■■□□□ 1.27
SSB-202ENST00000409333 KIF1AQ12756 1690 aa23■■□□□ 1.27
SSB-202ENST00000409333 ATF3P18847 181 aa22.99■■□□□ 1.27
SSB-202ENST00000409333 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
SSB-202ENST00000409333 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
SSB-202ENST00000409333 NPC1L1Q9UHC9 1359 aa22.99■■□□□ 1.27
SSB-202ENST00000409333 PARD3Q8TEW0 1356 aa22.98■■□□□ 1.27
SSB-202ENST00000409333 EDC4Q6P2E9 1401 aaKnown RBP22.97■■□□□ 1.27
SSB-202ENST00000409333 USP6P35125 1406 aa22.96■■□□□ 1.27
SSB-202ENST00000409333 CADPS2Q86UW7 1296 aa22.96■■□□□ 1.27
SSB-202ENST00000409333 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.27
SSB-202ENST00000409333 ESCO1Q5FWF5 840 aa22.95■■□□□ 1.26
SSB-202ENST00000409333 PHF8Q9UPP1 1060 aa22.95■■□□□ 1.26
SSB-202ENST00000409333 NGDNQ8NEJ9 315 aaKnown RBP22.94■■□□□ 1.26
SSB-202ENST00000409333 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
SSB-202ENST00000409333 ZNF692Q9BU19 519 aaPredicted RBP22.94■■□□□ 1.26
SSB-202ENST00000409333 RALBP1Q15311 655 aa22.93■■□□□ 1.26
SSB-202ENST00000409333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.92■■□□□ 1.26
SSB-202ENST00000409333 SSH2Q76I76 1423 aa22.91■■□□□ 1.26
SSB-202ENST00000409333 NSD2O96028 1365 aa22.91■■□□□ 1.26
SSB-202ENST00000409333 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
SSB-202ENST00000409333 TRPM3Q9HCF6 1732 aaPredicted RBP22.89■■□□□ 1.26
SSB-202ENST00000409333 FYB1O15117 783 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms