RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 HFM1A2PYH4 1435 aa19.93■□□□□ 0.78
TUBA3D-202ENST00000409047 PXDNQ92626 1479 aa19.93■□□□□ 0.78
TUBA3D-202ENST00000409047 CDC42BPGQ6DT37 1551 aa19.92■□□□□ 0.78
TUBA3D-202ENST00000409047 USP21Q9UK80 565 aa19.92■□□□□ 0.78
TUBA3D-202ENST00000409047 MARF1Q9Y4F3 1742 aaKnown RBP19.92■□□□□ 0.78
TUBA3D-202ENST00000409047 RPGRIP1LQ68CZ1 1315 aa19.92■□□□□ 0.78
TUBA3D-202ENST00000409047 BCL9LQ86UU0 1499 aa19.91■□□□□ 0.78
TUBA3D-202ENST00000409047 TRPC5Q9UL62 973 aaPredicted RBP19.9■□□□□ 0.78
TUBA3D-202ENST00000409047 ATAD2Q6PL18 1390 aa19.9■□□□□ 0.78
TUBA3D-202ENST00000409047 TECPR2O15040 1411 aa19.86■□□□□ 0.77
TUBA3D-202ENST00000409047 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
TUBA3D-202ENST00000409047 NPHP3Q7Z494 1330 aa19.85■□□□□ 0.77
TUBA3D-202ENST00000409047 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
TUBA3D-202ENST00000409047 ESCO1Q5FWF5 840 aa19.84■□□□□ 0.77
TUBA3D-202ENST00000409047 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.84■□□□□ 0.77
TUBA3D-202ENST00000409047 KNDC1Q76NI1 1749 aa19.83■□□□□ 0.77
TUBA3D-202ENST00000409047 XPCQ01831 940 aaPredicted RBP19.83■□□□□ 0.77
TUBA3D-202ENST00000409047 SLC4A1APQ9BWU0 796 aaKnown RBP19.83■□□□□ 0.77
TUBA3D-202ENST00000409047 SPATA31E1Q6ZUB1 1445 aa19.83■□□□□ 0.76
TUBA3D-202ENST00000409047 FOXO3O43524 673 aa19.82■□□□□ 0.76
TUBA3D-202ENST00000409047 FOXD1Q16676 465 aa19.82■□□□□ 0.76
TUBA3D-202ENST00000409047 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
TUBA3D-202ENST00000409047 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
TUBA3D-202ENST00000409047 GLI3P10071 1580 aa19.81■□□□□ 0.76
TUBA3D-202ENST00000409047 FMN2Q9NZ56 1722 aa19.81■□□□□ 0.76
TUBA3D-202ENST00000409047 SLIT2O94813 1529 aa19.8■□□□□ 0.76
TUBA3D-202ENST00000409047 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
TUBA3D-202ENST00000409047 GJD4Q96KN9 370 aaPredicted RBP19.79■□□□□ 0.76
TUBA3D-202ENST00000409047 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
TUBA3D-202ENST00000409047 BRWD3Q6RI45 1802 aa19.77■□□□□ 0.76
TUBA3D-202ENST00000409047 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
TUBA3D-202ENST00000409047 PIK3C2GO75747 1445 aa19.76■□□□□ 0.75
TUBA3D-202ENST00000409047 RGPD8O14715 1765 aaPredicted RBP19.76■□□□□ 0.75
TUBA3D-202ENST00000409047 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
TUBA3D-202ENST00000409047 STK26Q9P289 416 aa19.76■□□□□ 0.75
TUBA3D-202ENST00000409047 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
TUBA3D-202ENST00000409047 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
TUBA3D-202ENST00000409047 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
TUBA3D-202ENST00000409047 USP32Q8NFA0 1604 aa19.75■□□□□ 0.75
TUBA3D-202ENST00000409047 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
TUBA3D-202ENST00000409047 ANKRD30BQ9BXX2 1392 aa19.73■□□□□ 0.75
TUBA3D-202ENST00000409047 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
TUBA3D-202ENST00000409047 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
TUBA3D-202ENST00000409047 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
TUBA3D-202ENST00000409047 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
TUBA3D-202ENST00000409047 YTHDC2Q9H6S0 1430 aaKnown RBP19.72■□□□□ 0.75
TUBA3D-202ENST00000409047 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
TUBA3D-202ENST00000409047 PLCH1Q4KWH8 1693 aa19.68■□□□□ 0.74
TUBA3D-202ENST00000409047 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
TUBA3D-202ENST00000409047 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
TUBA3D-202ENST00000409047 KRT28Q7Z3Y7 464 aa19.68■□□□□ 0.74
TUBA3D-202ENST00000409047 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
TUBA3D-202ENST00000409047 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
TUBA3D-202ENST00000409047 MPHOSPH9Q99550 1183 aa19.67■□□□□ 0.74
TUBA3D-202ENST00000409047 NWD2Q9ULI1 1742 aa19.67■□□□□ 0.74
TUBA3D-202ENST00000409047 DEFB132Q7Z7B7 95 aa19.65■□□□□ 0.74
TUBA3D-202ENST00000409047 CABLES1Q8TDN4 633 aa19.65■□□□□ 0.74
TUBA3D-202ENST00000409047 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
TUBA3D-202ENST00000409047 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
TUBA3D-202ENST00000409047 SBNO1A3KN83 1393 aa19.63■□□□□ 0.73
TUBA3D-202ENST00000409047 VPS72Q15906 364 aa19.63■□□□□ 0.73
TUBA3D-202ENST00000409047 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
TUBA3D-202ENST00000409047 SEPT12Q8IYM1 358 aa19.62■□□□□ 0.73
TUBA3D-202ENST00000409047 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
TUBA3D-202ENST00000409047 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
TUBA3D-202ENST00000409047 TRPM3Q9HCF6 1732 aaPredicted RBP19.61■□□□□ 0.73
TUBA3D-202ENST00000409047 ADGRB2O60241 1585 aa19.58■□□□□ 0.73
TUBA3D-202ENST00000409047 DLC1Q96QB1 1528 aa19.58■□□□□ 0.73
TUBA3D-202ENST00000409047 FAM83GA6ND36 823 aa19.58■□□□□ 0.72
TUBA3D-202ENST00000409047 LRP5O75197 1615 aa19.58■□□□□ 0.72
TUBA3D-202ENST00000409047 ALS2Q96Q42 1657 aa19.57■□□□□ 0.72
TUBA3D-202ENST00000409047 PSME1Q06323 249 aa19.57■□□□□ 0.72
TUBA3D-202ENST00000409047 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
TUBA3D-202ENST00000409047 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
TUBA3D-202ENST00000409047 DHX57Q6P158 1386 aaKnown RBP19.57■□□□□ 0.72
TUBA3D-202ENST00000409047 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
TUBA3D-202ENST00000409047 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
TUBA3D-202ENST00000409047 ARHGEF10O15013 1369 aa19.56■□□□□ 0.72
TUBA3D-202ENST00000409047 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
TUBA3D-202ENST00000409047 KRT27Q7Z3Y8 459 aa19.55■□□□□ 0.72
TUBA3D-202ENST00000409047 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
TUBA3D-202ENST00000409047 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
TUBA3D-202ENST00000409047 PRR36Q9H6K5 1346 aa19.52■□□□□ 0.72
TUBA3D-202ENST00000409047 HAP1P54257 671 aaPredicted RBP19.52■□□□□ 0.72
TUBA3D-202ENST00000409047 COL14A1Q05707 1796 aaKnown RBP19.51■□□□□ 0.71
TUBA3D-202ENST00000409047 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
TUBA3D-202ENST00000409047 CCDC9Q9Y3X0 531 aaKnown RBP19.5■□□□□ 0.71
TUBA3D-202ENST00000409047 THSD7AQ9UPZ6 1657 aa19.49■□□□□ 0.71
TUBA3D-202ENST00000409047 SF3B2Q13435 895 aaKnown RBP19.48■□□□□ 0.71
TUBA3D-202ENST00000409047 FAM98CQ17RN3 349 aaKnown RBP19.48■□□□□ 0.71
TUBA3D-202ENST00000409047 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
TUBA3D-202ENST00000409047 TULP4Q9NRJ4 1543 aa19.47■□□□□ 0.71
TUBA3D-202ENST00000409047 HIRIP3Q9BW71 556 aaPredicted RBP19.47■□□□□ 0.71
TUBA3D-202ENST00000409047 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
TUBA3D-202ENST00000409047 TNS1Q9HBL0 1735 aaKnown RBP19.46■□□□□ 0.71
TUBA3D-202ENST00000409047 POGKQ9P215 609 aa19.46■□□□□ 0.71
TUBA3D-202ENST00000409047 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
TUBA3D-202ENST00000409047 PSDA5PKW4 1024 aaPredicted RBP19.45■□□□□ 0.7
TUBA3D-202ENST00000409047 SPATA31A5Q5VU36 1347 aa19.45■□□□□ 0.7
TUBA3D-202ENST00000409047 SPATA31A7Q8IWB4 1347 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms