RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
SSFA2-202ENST00000409001 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
SSFA2-202ENST00000409001 CREBRFQ8IUR6 639 aa19.23■□□□□ 0.67
SSFA2-202ENST00000409001 FAM13BQ9NYF5 915 aa19.22■□□□□ 0.67
SSFA2-202ENST00000409001 CDK13Q14004 1512 aaKnown RBP19.21■□□□□ 0.67
SSFA2-202ENST00000409001 SMC3Q9UQE7 1217 aa19.21■□□□□ 0.67
SSFA2-202ENST00000409001 C20orf194Q5TEA3 1177 aa19.21■□□□□ 0.67
SSFA2-202ENST00000409001 NASPP49321 788 aaPredicted RBP19.21■□□□□ 0.67
SSFA2-202ENST00000409001 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
SSFA2-202ENST00000409001 RNF214Q8ND24 703 aa19.2■□□□□ 0.66
SSFA2-202ENST00000409001 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
SSFA2-202ENST00000409001 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
SSFA2-202ENST00000409001 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
SSFA2-202ENST00000409001 EPRSP07814 1512 aaKnown RBP19.19■□□□□ 0.66
SSFA2-202ENST00000409001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.19■□□□□ 0.66
SSFA2-202ENST00000409001 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSFA2-202ENST00000409001 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
SSFA2-202ENST00000409001 WDR63Q8IWG1 891 aa19.19■□□□□ 0.66
SSFA2-202ENST00000409001 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
SSFA2-202ENST00000409001 PCF11O94913 1555 aaKnown RBP19.18■□□□□ 0.66
SSFA2-202ENST00000409001 NUTM2GQ5VZR2 741 aa19.18■□□□□ 0.66
SSFA2-202ENST00000409001 BICD2Q8TD16 824 aa19.18■□□□□ 0.66
SSFA2-202ENST00000409001 NEK4P51957 841 aa19.18■□□□□ 0.66
SSFA2-202ENST00000409001 MVPQ14764 893 aaKnown RBP19.18■□□□□ 0.66
SSFA2-202ENST00000409001 CAVIN1Q6NZI2 390 aaKnown RBP19.18■□□□□ 0.66
SSFA2-202ENST00000409001 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
SSFA2-202ENST00000409001 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
SSFA2-202ENST00000409001 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
SSFA2-202ENST00000409001 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
SSFA2-202ENST00000409001 RNF20Q5VTR2 975 aa19.16■□□□□ 0.66
SSFA2-202ENST00000409001 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
SSFA2-202ENST00000409001 GCC1Q96CN9 775 aa19.16■□□□□ 0.66
SSFA2-202ENST00000409001 HECW1Q76N89 1606 aa19.15■□□□□ 0.66
SSFA2-202ENST00000409001 CABP1Q9NZU7 370 aa19.15■□□□□ 0.66
SSFA2-202ENST00000409001 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
SSFA2-202ENST00000409001 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
SSFA2-202ENST00000409001 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
SSFA2-202ENST00000409001 HSP90AB4PQ58FF6 505 aa19.14■□□□□ 0.66
SSFA2-202ENST00000409001 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.14■□□□□ 0.65
SSFA2-202ENST00000409001 NLRP6P59044 892 aa19.14■□□□□ 0.65
SSFA2-202ENST00000409001 PSME1Q06323 249 aa19.14■□□□□ 0.65
SSFA2-202ENST00000409001 SURF6O75683 361 aaKnown RBP19.14■□□□□ 0.65
SSFA2-202ENST00000409001 ERC2O15083 957 aa19.13■□□□□ 0.65
SSFA2-202ENST00000409001 PRPF40AO75400 957 aaKnown RBP19.13■□□□□ 0.65
SSFA2-202ENST00000409001 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
SSFA2-202ENST00000409001 AIMP1Q12904 312 aaKnown RBP19.12■□□□□ 0.65
SSFA2-202ENST00000409001 RABEP1Q15276 862 aa19.12■□□□□ 0.65
SSFA2-202ENST00000409001 FAM69CQ0P6D2 419 aa19.12■□□□□ 0.65
SSFA2-202ENST00000409001 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
SSFA2-202ENST00000409001 GNAI3P08754 354 aa19.12■□□□□ 0.65
SSFA2-202ENST00000409001 CLSTN1O94985 981 aa19.11■□□□□ 0.65
SSFA2-202ENST00000409001 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
SSFA2-202ENST00000409001 CPLX1O14810 134 aa19.11■□□□□ 0.65
SSFA2-202ENST00000409001 ABCC5O15440 1437 aa19.11■□□□□ 0.65
SSFA2-202ENST00000409001 CPLX2Q6PUV4 134 aaKnown RBP19.11■□□□□ 0.65
SSFA2-202ENST00000409001 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
SSFA2-202ENST00000409001 CT47B1P0C2W7 299 aaPredicted RBP19.1■□□□□ 0.65
SSFA2-202ENST00000409001 SULT6B1Q6IMI4 303 aa19.1■□□□□ 0.65
SSFA2-202ENST00000409001 R3HCC1Q9Y3T6 440 aaKnown RBP19.1■□□□□ 0.65
SSFA2-202ENST00000409001 NINLQ9Y2I6 1382 aa19.1■□□□□ 0.65
SSFA2-202ENST00000409001 FOSBP53539 338 aa19.1■□□□□ 0.65
SSFA2-202ENST00000409001 CDK19Q9BWU1 502 aa19.09■□□□□ 0.65
SSFA2-202ENST00000409001 PES1O00541 588 aaKnown RBP19.09■□□□□ 0.65
SSFA2-202ENST00000409001 CHD1LQ86WJ1 897 aa19.09■□□□□ 0.65
SSFA2-202ENST00000409001 CCAR2Q8N163 923 aaKnown RBP19.09■□□□□ 0.65
SSFA2-202ENST00000409001 ANO8Q9HCE9 1232 aaPredicted RBP19.09■□□□□ 0.65
SSFA2-202ENST00000409001 MAP3K1Q13233 1512 aa19.08■□□□□ 0.65
SSFA2-202ENST00000409001 CLASRPQ8N2M8 674 aaKnown RBP19.08■□□□□ 0.65
SSFA2-202ENST00000409001 APPP05067 770 aa19.08■□□□□ 0.64
SSFA2-202ENST00000409001 TXNDC2Q86VQ3 553 aa19.08■□□□□ 0.64
SSFA2-202ENST00000409001 FBXW7Q969H0 707 aa19.08■□□□□ 0.64
SSFA2-202ENST00000409001 MCM4P33991 863 aa19.08■□□□□ 0.64
SSFA2-202ENST00000409001 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
SSFA2-202ENST00000409001 TPM3P06753 285 aa19.08■□□□□ 0.64
SSFA2-202ENST00000409001 LRRFIP1Q32MZ4 808 aaKnown RBP19.08■□□□□ 0.64
SSFA2-202ENST00000409001 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
SSFA2-202ENST00000409001 SASS6Q6UVJ0 657 aa19.07■□□□□ 0.64
SSFA2-202ENST00000409001 RIC3Q7Z5B4 369 aa19.07■□□□□ 0.64
SSFA2-202ENST00000409001 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
SSFA2-202ENST00000409001 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
SSFA2-202ENST00000409001 MBD3O95983 291 aa19.06■□□□□ 0.64
SSFA2-202ENST00000409001 TMEM57Q8N5G2 664 aa19.06■□□□□ 0.64
SSFA2-202ENST00000409001 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
SSFA2-202ENST00000409001 K7ELQ4 463 aaPredicted RBP19.05■□□□□ 0.64
SSFA2-202ENST00000409001 AKAP17AQ02040 695 aaKnown RBP19.05■□□□□ 0.64
SSFA2-202ENST00000409001 TPD52L1Q16890 204 aaPredicted RBP19.05■□□□□ 0.64
SSFA2-202ENST00000409001 SYNE3Q6ZMZ3 975 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 TMPOP42166 694 aaKnown RBP19.05■□□□□ 0.64
SSFA2-202ENST00000409001 NEUROD6Q96NK8 337 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 PTPN23Q9H3S7 1636 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 GNAI2P04899 355 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 CNTROBQ8N137 903 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 TNNT3P45378 269 aaPredicted RBP19.05■□□□□ 0.64
SSFA2-202ENST00000409001 GAS2L2Q8NHY3 880 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.05■□□□□ 0.64
SSFA2-202ENST00000409001 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
SSFA2-202ENST00000409001 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
SSFA2-202ENST00000409001 IFT140Q96RY7 1462 aa19.04■□□□□ 0.64
SSFA2-202ENST00000409001 RARSP54136 660 aaKnown RBP19.04■□□□□ 0.64
SSFA2-202ENST00000409001 RAPGEF4Q8WZA2 1011 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms