RNA–Protein interactions for RNA: ENST00000407180.1

RAP1BP3-201, Transcript of RAP1B, member of RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAP1BP3, Length 549 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1BP3-201ENST00000407180 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
RAP1BP3-201ENST00000407180 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
RAP1BP3-201ENST00000407180 GPR37O15354 613 aa10.84□□□□□ -0.67
RAP1BP3-201ENST00000407180 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
RAP1BP3-201ENST00000407180 LOC100996750A0A140TA64 210 aa10.83□□□□□ -0.68
RAP1BP3-201ENST00000407180 TRIM32Q13049 653 aa10.83□□□□□ -0.68
RAP1BP3-201ENST00000407180 KRTAP4-6Q9BYQ5 205 aa10.83□□□□□ -0.68
RAP1BP3-201ENST00000407180 J3QL48 77 aa10.82□□□□□ -0.68
RAP1BP3-201ENST00000407180 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
RAP1BP3-201ENST00000407180 MRGPRX2Q96LB1 330 aa10.82□□□□□ -0.68
RAP1BP3-201ENST00000407180 GNPATO15228 680 aa10.8□□□□□ -0.68
RAP1BP3-201ENST00000407180 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
RAP1BP3-201ENST00000407180 MMP16P51512 607 aa10.79□□□□□ -0.68
RAP1BP3-201ENST00000407180 RBM26Q5T8P6 1007 aaKnown RBP10.79□□□□□ -0.68
RAP1BP3-201ENST00000407180 SENP2Q9HC62 589 aa10.79□□□□□ -0.68
RAP1BP3-201ENST00000407180 HPS1Q92902 700 aa10.78□□□□□ -0.68
RAP1BP3-201ENST00000407180 P3H3Q8IVL6 736 aa10.77□□□□□ -0.69
RAP1BP3-201ENST00000407180 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
RAP1BP3-201ENST00000407180 AMER1Q5JTC6 1135 aaPredicted RBP10.75□□□□□ -0.69
RAP1BP3-201ENST00000407180 TESPA1A2RU30 521 aaPredicted RBP10.73□□□□□ -0.69
RAP1BP3-201ENST00000407180 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
RAP1BP3-201ENST00000407180 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
RAP1BP3-201ENST00000407180 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
RAP1BP3-201ENST00000407180 DXOO77932 396 aaKnown RBP10.72□□□□□ -0.69
RAP1BP3-201ENST00000407180 LORP23490 312 aaPredicted RBP10.72□□□□□ -0.69
RAP1BP3-201ENST00000407180 SKOR1P84550 965 aa10.71□□□□□ -0.69
RAP1BP3-201ENST00000407180 Q3C1V9 767 aa10.7□□□□□ -0.7
RAP1BP3-201ENST00000407180 GRIPAP1Q4V328 841 aa10.69□□□□□ -0.7
RAP1BP3-201ENST00000407180 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
RAP1BP3-201ENST00000407180 USB1Q9BQ65 265 aaKnown RBP10.68□□□□□ -0.7
RAP1BP3-201ENST00000407180 CD46P15529 392 aa10.66□□□□□ -0.7
RAP1BP3-201ENST00000407180 WNT7BP56706 349 aa10.66□□□□□ -0.7
RAP1BP3-201ENST00000407180 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.7
RAP1BP3-201ENST00000407180 GMPRP36959 345 aa10.64□□□□□ -0.71
RAP1BP3-201ENST00000407180 HLA-CQ95604 372 aa10.64□□□□□ -0.71
RAP1BP3-201ENST00000407180 TRIM46Q7Z4K8 759 aa10.63□□□□□ -0.71
RAP1BP3-201ENST00000407180 BMP1P13497 986 aa10.62□□□□□ -0.71
RAP1BP3-201ENST00000407180 CCDC24Q8N4L8 307 aa10.62□□□□□ -0.71
RAP1BP3-201ENST00000407180 SLC16A10Q8TF71 515 aa10.62□□□□□ -0.71
RAP1BP3-201ENST00000407180 ALDH1A1P00352 501 aa10.61□□□□□ -0.71
RAP1BP3-201ENST00000407180 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
RAP1BP3-201ENST00000407180 SIAH2O43255 324 aa10.6□□□□□ -0.71
RAP1BP3-201ENST00000407180 KDM4AO75164 1064 aa10.6□□□□□ -0.71
RAP1BP3-201ENST00000407180 SMYD5Q6GMV2 418 aa10.6□□□□□ -0.71
RAP1BP3-201ENST00000407180 NPAS3Q8IXF0 933 aa10.6□□□□□ -0.71
RAP1BP3-201ENST00000407180 ZSCAN1Q8NBB4 408 aa10.6□□□□□ -0.71
RAP1BP3-201ENST00000407180 H3BM21 787 aa10.58□□□□□ -0.72
RAP1BP3-201ENST00000407180 IRF7Q92985 503 aa10.58□□□□□ -0.72
RAP1BP3-201ENST00000407180 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
RAP1BP3-201ENST00000407180 VEGFBP49765 207 aa10.57□□□□□ -0.72
RAP1BP3-201ENST00000407180 HOXA2O43364 376 aa10.56□□□□□ -0.72
RAP1BP3-201ENST00000407180 JUNDP17535 347 aa10.55□□□□□ -0.72
RAP1BP3-201ENST00000407180 CAPN5O15484 640 aaPredicted RBP10.54□□□□□ -0.72
RAP1BP3-201ENST00000407180 USP46P62068 366 aa10.54□□□□□ -0.72
RAP1BP3-201ENST00000407180 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
RAP1BP3-201ENST00000407180 PTCRAQ6ISU1 281 aaPredicted RBP10.54□□□□□ -0.72
RAP1BP3-201ENST00000407180 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
RAP1BP3-201ENST00000407180 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
RAP1BP3-201ENST00000407180 SYMPKQ92797 1274 aaKnown RBP10.51□□□□□ -0.73
RAP1BP3-201ENST00000407180 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
RAP1BP3-201ENST00000407180 SUZ12Q15022 739 aaKnown RBP10.49□□□□□ -0.73
RAP1BP3-201ENST00000407180 WASF2Q9Y6W5 498 aa10.49□□□□□ -0.73
RAP1BP3-201ENST00000407180 SH3BP2P78314 561 aa10.48□□□□□ -0.73
RAP1BP3-201ENST00000407180 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
RAP1BP3-201ENST00000407180 ZFP42Q96MM3 310 aa10.48□□□□□ -0.73
RAP1BP3-201ENST00000407180 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
RAP1BP3-201ENST00000407180 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
RAP1BP3-201ENST00000407180 TLL2Q9Y6L7 1015 aa10.45□□□□□ -0.74
RAP1BP3-201ENST00000407180 VSIG8P0DPA2 414 aa10.44□□□□□ -0.74
RAP1BP3-201ENST00000407180 IRF6O14896 467 aa10.42□□□□□ -0.74
RAP1BP3-201ENST00000407180 CCNYL3P0C7X3 344 aa10.41□□□□□ -0.74
RAP1BP3-201ENST00000407180 PCDHGC3Q9UN70 934 aa10.41□□□□□ -0.74
RAP1BP3-201ENST00000407180 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
RAP1BP3-201ENST00000407180 UNC93B1Q9H1C4 597 aa10.4□□□□□ -0.74
RAP1BP3-201ENST00000407180 NNTQ13423 1086 aa10.39□□□□□ -0.75
RAP1BP3-201ENST00000407180 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
RAP1BP3-201ENST00000407180 SOBPA7XYQ1 873 aa10.38□□□□□ -0.75
RAP1BP3-201ENST00000407180 MS4A1P11836 297 aa10.38□□□□□ -0.75
RAP1BP3-201ENST00000407180 TIMP2P16035 220 aa10.38□□□□□ -0.75
RAP1BP3-201ENST00000407180 GSK3AP49840 483 aa10.38□□□□□ -0.75
RAP1BP3-201ENST00000407180 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
RAP1BP3-201ENST00000407180 MPNDQ8N594 471 aa10.38□□□□□ -0.75
RAP1BP3-201ENST00000407180 PTPRNQ16849 979 aa10.37□□□□□ -0.75
RAP1BP3-201ENST00000407180 PURBQ96QR8 312 aaKnown RBP10.37□□□□□ -0.75
RAP1BP3-201ENST00000407180 KLF16Q9BXK1 252 aaPredicted RBP10.37□□□□□ -0.75
RAP1BP3-201ENST00000407180 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
RAP1BP3-201ENST00000407180 BAP1Q92560 729 aa10.36□□□□□ -0.75
RAP1BP3-201ENST00000407180 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
RAP1BP3-201ENST00000407180 EVA1BQ9NVM1 165 aa10.36□□□□□ -0.75
RAP1BP3-201ENST00000407180 FDX1P10109 184 aa10.35□□□□□ -0.75
RAP1BP3-201ENST00000407180 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
RAP1BP3-201ENST00000407180 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
RAP1BP3-201ENST00000407180 ADH1CP00326 375 aa10.34□□□□□ -0.75
RAP1BP3-201ENST00000407180 VARSP26640 1264 aaKnown RBP10.34□□□□□ -0.75
RAP1BP3-201ENST00000407180 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
RAP1BP3-201ENST00000407180 WDR4P57081 412 aaKnown RBP10.33□□□□□ -0.76
RAP1BP3-201ENST00000407180 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
RAP1BP3-201ENST00000407180 NUTM1Q86Y26 1132 aa10.33□□□□□ -0.76
RAP1BP3-201ENST00000407180 PLEKHG3A1L390 1219 aa10.32□□□□□ -0.76
RAP1BP3-201ENST00000407180 CLCN1P35523 988 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms