RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 APAF1O14727 1248 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 GAS2L3Q86XJ1 694 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 KRT222Q8N1A0 295 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 MCCP23508 829 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.64
PSEN1-205ENST00000406768 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 KDM2BQ8NHM5 1336 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.64
PSEN1-205ENST00000406768 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.64
PSEN1-205ENST00000406768 ZSCAN23Q3MJ62 389 aa11.02□□□□□ -0.64
PSEN1-205ENST00000406768 GRIN2AQ12879 1464 aa11.02□□□□□ -0.65
PSEN1-205ENST00000406768 TPD52L1Q16890 204 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-205ENST00000406768 KIAA0586Q9BVV6 1533 aa11.02□□□□□ -0.65
PSEN1-205ENST00000406768 BAG4O95429 457 aaKnown RBP11.01□□□□□ -0.65
PSEN1-205ENST00000406768 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
PSEN1-205ENST00000406768 TSC1Q92574 1164 aa11.01□□□□□ -0.65
PSEN1-205ENST00000406768 ZSCAN20P17040 1043 aaPredicted RBP11.01□□□□□ -0.65
PSEN1-205ENST00000406768 GTF2F1P35269 517 aaKnown RBP eCLIP11.01□□□□□ -0.65
PSEN1-205ENST00000406768 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
PSEN1-205ENST00000406768 LRRC9Q6ZRR7 1453 aa11.01□□□□□ -0.65
PSEN1-205ENST00000406768 IGHDP01880 384 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 CFAP53Q96M91 514 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 PANK3Q9H999 370 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
PSEN1-205ENST00000406768 SPC24Q8NBT2 197 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 HDAC5Q9UQL6 1122 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 NPHP1O15259 732 aa11□□□□□ -0.65
PSEN1-205ENST00000406768 DHX37Q8IY37 1157 aaKnown RBP11□□□□□ -0.65
PSEN1-205ENST00000406768 TPM4P67936 248 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 PRIM1P49642 420 aaKnown RBP10.99□□□□□ -0.65
PSEN1-205ENST00000406768 ZKSCAN2Q63HK3 967 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 ZNF830Q96NB3 372 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-205ENST00000406768 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-205ENST00000406768 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
PSEN1-205ENST00000406768 LNPKQ9C0E8 428 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 PKD2Q13563 968 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 AK7Q96M32 723 aa10.99□□□□□ -0.65
PSEN1-205ENST00000406768 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
PSEN1-205ENST00000406768 NOL10Q9BSC4 688 aaKnown RBP10.98□□□□□ -0.65
PSEN1-205ENST00000406768 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
PSEN1-205ENST00000406768 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
PSEN1-205ENST00000406768 LEKR1Q6ZMV7 388 aa10.98□□□□□ -0.65
PSEN1-205ENST00000406768 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
PSEN1-205ENST00000406768 ANKRD30AQ9BXX3 1397 aa10.98□□□□□ -0.65
PSEN1-205ENST00000406768 NCOA2Q15596 1464 aa10.98□□□□□ -0.65
PSEN1-205ENST00000406768 NUP160Q12769 1436 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 TEX2Q8IWB9 1127 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 TMEM51Q9NW97 253 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 USP25Q9UHP3 1055 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 ZBTB22O15209 634 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 RABEP1Q15276 862 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 RBSNQ9H1K0 784 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 RASSF4Q9H2L5 321 aa10.97□□□□□ -0.65
PSEN1-205ENST00000406768 DZIP1LQ8IYY4 767 aaKnown RBP10.96□□□□□ -0.65
PSEN1-205ENST00000406768 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
PSEN1-205ENST00000406768 NINLQ9Y2I6 1382 aa10.96□□□□□ -0.66
PSEN1-205ENST00000406768 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.66
PSEN1-205ENST00000406768 GNL2Q13823 731 aaKnown RBP10.95□□□□□ -0.66
PSEN1-205ENST00000406768 SMC5Q8IY18 1101 aa10.95□□□□□ -0.66
PSEN1-205ENST00000406768 TTC12Q9H892 705 aaPredicted RBP10.95□□□□□ -0.66
PSEN1-205ENST00000406768 FGD6Q6ZV73 1430 aa10.95□□□□□ -0.66
PSEN1-205ENST00000406768 ZNF445P59923 1031 aa10.95□□□□□ -0.66
PSEN1-205ENST00000406768 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
PSEN1-205ENST00000406768 ATP6V1DQ9Y5K8 247 aa10.95□□□□□ -0.66
PSEN1-205ENST00000406768 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 MNS1Q8NEH6 495 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 HFM1A2PYH4 1435 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 GOLGA6L19H0YKK7 550 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 ADCY5O95622 1261 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 PIBF1Q8WXW3 757 aa10.94□□□□□ -0.66
PSEN1-205ENST00000406768 TNNT1P13805 278 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 FAM193AP78312 1265 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 SNX21Q969T3 373 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 C16orf45Q96MC5 204 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 MIA2Q96PC5 1412 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 LRPPRCP42704 1394 aaKnown RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
PSEN1-205ENST00000406768 TRIM5Q9C035 493 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 RSPH14Q9UHP6 348 aa10.93□□□□□ -0.66
PSEN1-205ENST00000406768 HOMER1Q86YM7 354 aa10.92□□□□□ -0.66
PSEN1-205ENST00000406768 C10orf67Q8IYJ2 551 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms