RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
FAM49A-202ENST00000406434 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
FAM49A-202ENST00000406434 DCCP43146 1447 aa14.98□□□□□ -0.01
FAM49A-202ENST00000406434 YTHDC2Q9H6S0 1430 aaKnown RBP14.98□□□□□ -0.01
FAM49A-202ENST00000406434 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
FAM49A-202ENST00000406434 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
FAM49A-202ENST00000406434 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
FAM49A-202ENST00000406434 NRXN1Q9ULB1 1477 aa14.97□□□□□ -0.01
FAM49A-202ENST00000406434 PLEKHH1Q9ULM0 1364 aa14.97□□□□□ -0.01
FAM49A-202ENST00000406434 NALCNQ8IZF0 1738 aa14.97□□□□□ -0.01
FAM49A-202ENST00000406434 MST1RQ04912 1400 aa14.97□□□□□ -0.01
FAM49A-202ENST00000406434 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
FAM49A-202ENST00000406434 POGKQ9P215 609 aa14.97□□□□□ -0.01
FAM49A-202ENST00000406434 TRAK1Q9UPV9 953 aa14.97□□□□□ -0.01
FAM49A-202ENST00000406434 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
FAM49A-202ENST00000406434 ASXL1Q8IXJ9 1541 aa14.96□□□□□ -0.01
FAM49A-202ENST00000406434 ORAI2Q96SN7 254 aa14.96□□□□□ -0.02
FAM49A-202ENST00000406434 ILDR2Q71H61 639 aa14.95□□□□□ -0.02
FAM49A-202ENST00000406434 SIRT1Q96EB6 747 aa14.95□□□□□ -0.02
FAM49A-202ENST00000406434 PRAM1Q96QH2 718 aa14.95□□□□□ -0.02
FAM49A-202ENST00000406434 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
FAM49A-202ENST00000406434 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
FAM49A-202ENST00000406434 TECPR2O15040 1411 aa14.93□□□□□ -0.02
FAM49A-202ENST00000406434 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
FAM49A-202ENST00000406434 C1orf167Q5SNV9 1468 aa14.93□□□□□ -0.02
FAM49A-202ENST00000406434 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
FAM49A-202ENST00000406434 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
FAM49A-202ENST00000406434 JCADQ9P266 1359 aa14.92□□□□□ -0.02
FAM49A-202ENST00000406434 LAMC1P11047 1609 aa14.91□□□□□ -0.02
FAM49A-202ENST00000406434 NUTM2BA6NNL0 878 aaPredicted RBP14.9□□□□□ -0.02
FAM49A-202ENST00000406434 NUTM2EB1AL46 878 aaPredicted RBP14.9□□□□□ -0.02
FAM49A-202ENST00000406434 NUTM2AQ8IVF1 878 aaPredicted RBP14.9□□□□□ -0.02
FAM49A-202ENST00000406434 LRRC59Q96AG4 307 aaKnown RBP14.9□□□□□ -0.02
FAM49A-202ENST00000406434 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
FAM49A-202ENST00000406434 NBPF1Q3BBV0 1214 aa14.89□□□□□ -0.03
FAM49A-202ENST00000406434 HIRIP3Q9BW71 556 aaPredicted RBP14.89□□□□□ -0.03
FAM49A-202ENST00000406434 COL16A1Q07092 1604 aaPredicted RBP14.89□□□□□ -0.03
FAM49A-202ENST00000406434 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
FAM49A-202ENST00000406434 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
FAM49A-202ENST00000406434 FOXO3O43524 673 aa14.88□□□□□ -0.03
FAM49A-202ENST00000406434 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
FAM49A-202ENST00000406434 ADGRB1O14514 1584 aa14.87□□□□□ -0.03
FAM49A-202ENST00000406434 XPCQ01831 940 aaPredicted RBP14.86□□□□□ -0.03
FAM49A-202ENST00000406434 SPATA31A6Q5VVP1 1343 aa14.86□□□□□ -0.03
FAM49A-202ENST00000406434 CDC42BPGQ6DT37 1551 aa14.86□□□□□ -0.03
FAM49A-202ENST00000406434 DLC1Q96QB1 1528 aa14.85□□□□□ -0.03
FAM49A-202ENST00000406434 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
FAM49A-202ENST00000406434 RGS17Q9UGC6 210 aaPredicted RBP14.85□□□□□ -0.03
FAM49A-202ENST00000406434 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
FAM49A-202ENST00000406434 NPHP3Q7Z494 1330 aa14.84□□□□□ -0.03
FAM49A-202ENST00000406434 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
FAM49A-202ENST00000406434 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
FAM49A-202ENST00000406434 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
FAM49A-202ENST00000406434 WASLO00401 505 aaPredicted RBP14.82□□□□□ -0.04
FAM49A-202ENST00000406434 PMFBP1Q8TBY8 1022 aa14.82□□□□□ -0.04
FAM49A-202ENST00000406434 RGPD8O14715 1765 aaPredicted RBP14.81□□□□□ -0.04
FAM49A-202ENST00000406434 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
FAM49A-202ENST00000406434 KRT28Q7Z3Y7 464 aa14.81□□□□□ -0.04
FAM49A-202ENST00000406434 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
FAM49A-202ENST00000406434 PSME1Q06323 249 aa14.8□□□□□ -0.04
FAM49A-202ENST00000406434 PNPLA6Q8IY17 1366 aa14.8□□□□□ -0.04
FAM49A-202ENST00000406434 KIAA1210Q9ULL0 1709 aa14.79□□□□□ -0.04
FAM49A-202ENST00000406434 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
FAM49A-202ENST00000406434 ADAMTS2O95450 1211 aa14.79□□□□□ -0.04
FAM49A-202ENST00000406434 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
FAM49A-202ENST00000406434 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
FAM49A-202ENST00000406434 LRP6O75581 1613 aa14.78□□□□□ -0.04
FAM49A-202ENST00000406434 NBPF8Q3BBV2 869 aa14.78□□□□□ -0.04
FAM49A-202ENST00000406434 CDK19Q9BWU1 502 aa14.78□□□□□ -0.04
FAM49A-202ENST00000406434 SOCS7O14512 581 aa14.77□□□□□ -0.04
FAM49A-202ENST00000406434 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.04
FAM49A-202ENST00000406434 C8orf37Q96NL8 207 aa14.77□□□□□ -0.04
FAM49A-202ENST00000406434 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
FAM49A-202ENST00000406434 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
FAM49A-202ENST00000406434 CENPJQ9HC77 1338 aaPredicted RBP14.76□□□□□ -0.05
FAM49A-202ENST00000406434 ROCK2O75116 1388 aaKnown RBP14.75□□□□□ -0.05
FAM49A-202ENST00000406434 NGDNQ8NEJ9 315 aaKnown RBP14.75□□□□□ -0.05
FAM49A-202ENST00000406434 NUDT16Q96DE0 195 aaKnown RBP14.75□□□□□ -0.05
FAM49A-202ENST00000406434 NGLY1Q96IV0 654 aa14.75□□□□□ -0.05
FAM49A-202ENST00000406434 EIF3AQ14152 1382 aaKnown RBP14.75□□□□□ -0.05
FAM49A-202ENST00000406434 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
FAM49A-202ENST00000406434 SPATA31A3Q5VYP0 1347 aa14.74□□□□□ -0.05
FAM49A-202ENST00000406434 PXDNQ92626 1479 aa14.74□□□□□ -0.05
FAM49A-202ENST00000406434 ANKARQ7Z5J8 1434 aa14.73□□□□□ -0.05
FAM49A-202ENST00000406434 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
FAM49A-202ENST00000406434 AFF2P51816 1311 aa14.73□□□□□ -0.05
FAM49A-202ENST00000406434 KIF1AQ12756 1690 aa14.73□□□□□ -0.05
FAM49A-202ENST00000406434 ADGRB2O60241 1585 aa14.73□□□□□ -0.05
FAM49A-202ENST00000406434 HAP1P54257 671 aaPredicted RBP14.73□□□□□ -0.05
FAM49A-202ENST00000406434 USP32Q8NFA0 1604 aa14.72□□□□□ -0.05
FAM49A-202ENST00000406434 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
FAM49A-202ENST00000406434 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
FAM49A-202ENST00000406434 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
FAM49A-202ENST00000406434 TULP4Q9NRJ4 1543 aa14.71□□□□□ -0.05
FAM49A-202ENST00000406434 GPRASP1Q5JY77 1395 aa14.71□□□□□ -0.05
FAM49A-202ENST00000406434 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
FAM49A-202ENST00000406434 CABLES1Q8TDN4 633 aa14.7□□□□□ -0.06
FAM49A-202ENST00000406434 QTRT2Q9H974 415 aaKnown RBP14.7□□□□□ -0.06
FAM49A-202ENST00000406434 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
FAM49A-202ENST00000406434 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms