RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
CDPF1-203ENST00000404583 SLAIN2Q9P270 581 aa20.94■□□□□ 0.94
CDPF1-203ENST00000404583 NBPF8Q3BBV2 869 aa20.92■□□□□ 0.94
CDPF1-203ENST00000404583 FAM135BQ49AJ0 1406 aa20.92■□□□□ 0.94
CDPF1-203ENST00000404583 DCCP43146 1447 aa20.91■□□□□ 0.94
CDPF1-203ENST00000404583 PRAM1Q96QH2 718 aa20.91■□□□□ 0.94
CDPF1-203ENST00000404583 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
CDPF1-203ENST00000404583 DLC1Q96QB1 1528 aa20.9■□□□□ 0.94
CDPF1-203ENST00000404583 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
CDPF1-203ENST00000404583 POGKQ9P215 609 aa20.89■□□□□ 0.94
CDPF1-203ENST00000404583 ROBO1Q9Y6N7 1651 aa20.88■□□□□ 0.93
CDPF1-203ENST00000404583 ARHGEF28Q8N1W1 1705 aaKnown RBP20.86■□□□□ 0.93
CDPF1-203ENST00000404583 MST1RQ04912 1400 aa20.86■□□□□ 0.93
CDPF1-203ENST00000404583 ROCK2O75116 1388 aaKnown RBP20.84■□□□□ 0.93
CDPF1-203ENST00000404583 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
CDPF1-203ENST00000404583 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
CDPF1-203ENST00000404583 MINK1Q8N4C8 1332 aaPredicted RBP20.82■□□□□ 0.92
CDPF1-203ENST00000404583 NUTM2FA1L443 756 aa20.81■□□□□ 0.92
CDPF1-203ENST00000404583 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
CDPF1-203ENST00000404583 C1orf167Q5SNV9 1468 aa20.8■□□□□ 0.92
CDPF1-203ENST00000404583 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
CDPF1-203ENST00000404583 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
CDPF1-203ENST00000404583 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
CDPF1-203ENST00000404583 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
CDPF1-203ENST00000404583 RALGAPBQ86X10 1494 aa20.77■□□□□ 0.92
CDPF1-203ENST00000404583 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.91
CDPF1-203ENST00000404583 GPRASP1Q5JY77 1395 aa20.77■□□□□ 0.91
CDPF1-203ENST00000404583 RGPD8O14715 1765 aaPredicted RBP20.76■□□□□ 0.91
CDPF1-203ENST00000404583 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
CDPF1-203ENST00000404583 ADGRB2O60241 1585 aa20.75■□□□□ 0.91
CDPF1-203ENST00000404583 CENPJQ9HC77 1338 aaPredicted RBP20.75■□□□□ 0.91
CDPF1-203ENST00000404583 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
CDPF1-203ENST00000404583 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
CDPF1-203ENST00000404583 DDX17Q92841 729 aaKnown RBP20.73■□□□□ 0.91
CDPF1-203ENST00000404583 QRICH2Q9H0J4 1663 aa20.72■□□□□ 0.91
CDPF1-203ENST00000404583 RGS17Q9UGC6 210 aaPredicted RBP20.71■□□□□ 0.91
CDPF1-203ENST00000404583 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
CDPF1-203ENST00000404583 NHSL1Q5SYE7 1610 aa20.7■□□□□ 0.9
CDPF1-203ENST00000404583 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
CDPF1-203ENST00000404583 USP32Q8NFA0 1604 aa20.69■□□□□ 0.9
CDPF1-203ENST00000404583 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
CDPF1-203ENST00000404583 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
CDPF1-203ENST00000404583 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
CDPF1-203ENST00000404583 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
CDPF1-203ENST00000404583 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
CDPF1-203ENST00000404583 FOXO3O43524 673 aa20.66■□□□□ 0.9
CDPF1-203ENST00000404583 PHF8Q9UPP1 1060 aa20.65■□□□□ 0.9
CDPF1-203ENST00000404583 NUDT16Q96DE0 195 aaKnown RBP20.64■□□□□ 0.89
CDPF1-203ENST00000404583 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
CDPF1-203ENST00000404583 KIF1AQ12756 1690 aa20.63■□□□□ 0.89
CDPF1-203ENST00000404583 SRPK2P78362 688 aaKnown RBP20.62■□□□□ 0.89
CDPF1-203ENST00000404583 XPCQ01831 940 aaPredicted RBP20.62■□□□□ 0.89
CDPF1-203ENST00000404583 CABP2Q9NPB3 220 aa20.62■□□□□ 0.89
CDPF1-203ENST00000404583 NPHP3Q7Z494 1330 aa20.62■□□□□ 0.89
CDPF1-203ENST00000404583 SOS2Q07890 1332 aaPredicted RBP20.61■□□□□ 0.89
CDPF1-203ENST00000404583 ATP7BP35670 1465 aa20.61■□□□□ 0.89
CDPF1-203ENST00000404583 LRRC59Q96AG4 307 aaKnown RBP20.61■□□□□ 0.89
CDPF1-203ENST00000404583 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
CDPF1-203ENST00000404583 JCADQ9P266 1359 aa20.6■□□□□ 0.89
CDPF1-203ENST00000404583 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
CDPF1-203ENST00000404583 POTEAQ6S8J7 498 aa20.6■□□□□ 0.89
CDPF1-203ENST00000404583 ITSN1Q15811 1721 aa20.59■□□□□ 0.89
CDPF1-203ENST00000404583 PXDNQ92626 1479 aa20.58■□□□□ 0.89
CDPF1-203ENST00000404583 KRT28Q7Z3Y7 464 aa20.58■□□□□ 0.88
CDPF1-203ENST00000404583 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.88
CDPF1-203ENST00000404583 USP47Q96K76 1375 aa20.58■□□□□ 0.88
CDPF1-203ENST00000404583 SBNO2Q9Y2G9 1366 aa20.58■□□□□ 0.88
CDPF1-203ENST00000404583 SHPRHQ149N8 1683 aa20.56■□□□□ 0.88
CDPF1-203ENST00000404583 TOPAZ1Q8N9V7 1692 aa20.56■□□□□ 0.88
CDPF1-203ENST00000404583 PSME1Q06323 249 aa20.56■□□□□ 0.88
CDPF1-203ENST00000404583 LRP6O75581 1613 aa20.56■□□□□ 0.88
CDPF1-203ENST00000404583 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
CDPF1-203ENST00000404583 TESK2Q96S53 571 aa20.54■□□□□ 0.88
CDPF1-203ENST00000404583 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
CDPF1-203ENST00000404583 PNPLA6Q8IY17 1366 aa20.53■□□□□ 0.88
CDPF1-203ENST00000404583 PLEKHG3A1L390 1219 aa20.53■□□□□ 0.88
CDPF1-203ENST00000404583 ACEP12821 1306 aa20.51■□□□□ 0.87
CDPF1-203ENST00000404583 SPATA31A6Q5VVP1 1343 aa20.51■□□□□ 0.87
CDPF1-203ENST00000404583 CABP1Q9NZU7 370 aa20.51■□□□□ 0.87
CDPF1-203ENST00000404583 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
CDPF1-203ENST00000404583 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
CDPF1-203ENST00000404583 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
CDPF1-203ENST00000404583 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
CDPF1-203ENST00000404583 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
CDPF1-203ENST00000404583 MEX3CQ5U5Q3 659 aaKnown RBP20.48■□□□□ 0.87
CDPF1-203ENST00000404583 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
CDPF1-203ENST00000404583 TRPM3Q9HCF6 1732 aaPredicted RBP20.47■□□□□ 0.87
CDPF1-203ENST00000404583 SLC24A1O60721 1099 aa20.47■□□□□ 0.87
CDPF1-203ENST00000404583 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
CDPF1-203ENST00000404583 LMOD2Q6P5Q4 547 aa20.46■□□□□ 0.87
CDPF1-203ENST00000404583 TNS3Q68CZ2 1445 aa20.46■□□□□ 0.87
CDPF1-203ENST00000404583 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
CDPF1-203ENST00000404583 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDPF1-203ENST00000404583 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.86
CDPF1-203ENST00000404583 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
CDPF1-203ENST00000404583 TMF1P82094 1093 aa20.44■□□□□ 0.86
CDPF1-203ENST00000404583 PUS7Q96PZ0 661 aaKnown RBP20.44■□□□□ 0.86
CDPF1-203ENST00000404583 PLEKHG5O94827 1062 aa20.43■□□□□ 0.86
CDPF1-203ENST00000404583 TMC1Q8TDI8 760 aa20.43■□□□□ 0.86
CDPF1-203ENST00000404583 ALS2Q96Q42 1657 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms