RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.9
PARVB-202ENST00000402876 HSPA2P54652 639 aa26.88■■□□□ 1.89
PARVB-202ENST00000402876 AMOTL2Q9Y2J4 779 aa26.88■■□□□ 1.89
PARVB-202ENST00000402876 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
PARVB-202ENST00000402876 STRCQ7RTU9 1775 aa26.87■■□□□ 1.89
PARVB-202ENST00000402876 PLEKHH1Q9ULM0 1364 aa26.86■■□□□ 1.89
PARVB-202ENST00000402876 MINK1Q8N4C8 1332 aaPredicted RBP26.86■■□□□ 1.89
PARVB-202ENST00000402876 WAPLQ7Z5K2 1190 aa26.85■■□□□ 1.89
PARVB-202ENST00000402876 PUS7Q96PZ0 661 aaKnown RBP26.85■■□□□ 1.89
PARVB-202ENST00000402876 ADGRB2O60241 1585 aa26.84■■□□□ 1.89
PARVB-202ENST00000402876 NWD1Q149M9 1564 aa26.84■■□□□ 1.89
PARVB-202ENST00000402876 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.82■■□□□ 1.88
PARVB-202ENST00000402876 KCNA6P17658 529 aa26.77■■□□□ 1.88
PARVB-202ENST00000402876 ATAD2Q6PL18 1390 aa26.76■■□□□ 1.87
PARVB-202ENST00000402876 SRPK2P78362 688 aaKnown RBP26.75■■□□□ 1.87
PARVB-202ENST00000402876 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
PARVB-202ENST00000402876 ANP32CO43423 234 aa26.73■■□□□ 1.87
PARVB-202ENST00000402876 CDK19Q9BWU1 502 aa26.73■■□□□ 1.87
PARVB-202ENST00000402876 NINLQ9Y2I6 1382 aa26.72■■□□□ 1.87
PARVB-202ENST00000402876 CABP2Q9NPB3 220 aa26.72■■□□□ 1.87
PARVB-202ENST00000402876 NALCNQ8IZF0 1738 aa26.71■■□□□ 1.87
PARVB-202ENST00000402876 WASLO00401 505 aaPredicted RBP26.71■■□□□ 1.87
PARVB-202ENST00000402876 MIER1Q8N108 512 aa26.71■■□□□ 1.87
PARVB-202ENST00000402876 PANK3Q9H999 370 aa26.7■■□□□ 1.86
PARVB-202ENST00000402876 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
PARVB-202ENST00000402876 ITSN1Q15811 1721 aa26.66■■□□□ 1.86
PARVB-202ENST00000402876 TMC1Q8TDI8 760 aa26.66■■□□□ 1.86
PARVB-202ENST00000402876 CDC42BPGQ6DT37 1551 aa26.66■■□□□ 1.86
PARVB-202ENST00000402876 FMN2Q9NZ56 1722 aa26.65■■□□□ 1.86
PARVB-202ENST00000402876 TOPAZ1Q8N9V7 1692 aa26.64■■□□□ 1.86
PARVB-202ENST00000402876 DMRT2Q9Y5R5 561 aa26.64■■□□□ 1.86
PARVB-202ENST00000402876 ADGRL3Q9HAR2 1447 aa26.63■■□□□ 1.85
PARVB-202ENST00000402876 ATP7BP35670 1465 aa26.62■■□□□ 1.85
PARVB-202ENST00000402876 ANKRD36BQ8N2N9 1353 aa26.61■■□□□ 1.85
PARVB-202ENST00000402876 PER1O15534 1290 aaPredicted RBP26.61■■□□□ 1.85
PARVB-202ENST00000402876 SLC12A5Q9H2X9 1139 aa26.61■■□□□ 1.85
PARVB-202ENST00000402876 PROSER2Q86WR7 435 aaPredicted RBP26.6■■□□□ 1.85
PARVB-202ENST00000402876 USP32Q8NFA0 1604 aa26.6■■□□□ 1.85
PARVB-202ENST00000402876 NUDT16Q96DE0 195 aaKnown RBP26.59■■□□□ 1.85
PARVB-202ENST00000402876 KNSTRNQ9Y448 316 aa26.59■■□□□ 1.85
PARVB-202ENST00000402876 KTN1Q86UP2 1357 aaKnown RBP26.58■■□□□ 1.84
PARVB-202ENST00000402876 PPIP5K1Q6PFW1 1433 aa26.57■■□□□ 1.84
PARVB-202ENST00000402876 ANKARQ7Z5J8 1434 aa26.57■■□□□ 1.84
PARVB-202ENST00000402876 RGPD8O14715 1765 aaPredicted RBP26.57■■□□□ 1.84
PARVB-202ENST00000402876 PRKRIP1Q9H875 184 aaPredicted RBP26.57■■□□□ 1.84
PARVB-202ENST00000402876 TERF2IPQ9NYB0 399 aa26.57■■□□□ 1.84
PARVB-202ENST00000402876 NCOA3Q9Y6Q9 1424 aa26.56■■□□□ 1.84
PARVB-202ENST00000402876 AKAP12Q02952 1782 aa26.56■■□□□ 1.84
PARVB-202ENST00000402876 CCDC61Q9Y6R9 512 aa26.55■■□□□ 1.84
PARVB-202ENST00000402876 HDGFL2Q7Z4V5 671 aaPredicted RBP26.54■■□□□ 1.84
PARVB-202ENST00000402876 C14orf37Q86TY3 774 aa26.54■■□□□ 1.84
PARVB-202ENST00000402876 PRR36Q9H6K5 1346 aa26.54■■□□□ 1.84
PARVB-202ENST00000402876 NPC1L1Q9UHC9 1359 aa26.54■■□□□ 1.84
PARVB-202ENST00000402876 CD163L1Q9NR16 1453 aa26.54■■□□□ 1.84
PARVB-202ENST00000402876 CABP1Q9NZU7 370 aa26.53■■□□□ 1.84
PARVB-202ENST00000402876 A0A1W2PP64 1363 aa26.53■■□□□ 1.84
PARVB-202ENST00000402876 NSD3Q9BZ95 1437 aa26.53■■□□□ 1.84
PARVB-202ENST00000402876 MON2Q7Z3U7 1717 aa26.52■■□□□ 1.84
PARVB-202ENST00000402876 FBXO41Q8TF61 875 aa26.52■■□□□ 1.84
PARVB-202ENST00000402876 XIRP1Q702N8 1843 aaKnown RBP26.51■■□□□ 1.83
PARVB-202ENST00000402876 CCER2I3L3R5 266 aa26.51■■□□□ 1.83
PARVB-202ENST00000402876 CARD14Q9BXL6 1004 aa26.51■■□□□ 1.83
PARVB-202ENST00000402876 TMEM94Q12767 1356 aa26.5■■□□□ 1.83
PARVB-202ENST00000402876 RBM33Q96EV2 1170 aaKnown RBP26.5■■□□□ 1.83
PARVB-202ENST00000402876 RALBP1Q15311 655 aa26.49■■□□□ 1.83
PARVB-202ENST00000402876 KIF20BQ96Q89 1820 aa26.49■■□□□ 1.83
PARVB-202ENST00000402876 AMER1Q5JTC6 1135 aaPredicted RBP26.48■■□□□ 1.83
PARVB-202ENST00000402876 DCCP43146 1447 aa26.48■■□□□ 1.83
PARVB-202ENST00000402876 CPSF1Q10570 1443 aaKnown RBP26.48■■□□□ 1.83
PARVB-202ENST00000402876 PARD3Q8TEW0 1356 aa26.47■■□□□ 1.83
PARVB-202ENST00000402876 ZNF335Q9H4Z2 1342 aaPredicted RBP26.47■■□□□ 1.83
PARVB-202ENST00000402876 CNGB1Q14028 1251 aaPredicted RBP26.47■■□□□ 1.83
PARVB-202ENST00000402876 ANKRD26Q9UPS8 1709 aa26.46■■□□□ 1.83
PARVB-202ENST00000402876 NUTM2FA1L443 756 aa26.46■■□□□ 1.83
PARVB-202ENST00000402876 LRRC7Q96NW7 1537 aa26.45■■□□□ 1.83
PARVB-202ENST00000402876 CGNL1Q0VF96 1302 aa26.45■■□□□ 1.83
PARVB-202ENST00000402876 PLEKHG3A1L390 1219 aa26.45■■□□□ 1.82
PARVB-202ENST00000402876 CC2D1BQ5T0F9 858 aaKnown RBP26.45■■□□□ 1.82
PARVB-202ENST00000402876 C19orf44Q9H6X5 657 aa26.45■■□□□ 1.82
PARVB-202ENST00000402876 NSD2O96028 1365 aa26.45■■□□□ 1.82
PARVB-202ENST00000402876 EDC4Q6P2E9 1401 aaKnown RBP26.43■■□□□ 1.82
PARVB-202ENST00000402876 ZNF692Q9BU19 519 aaPredicted RBP26.43■■□□□ 1.82
PARVB-202ENST00000402876 NRKQ7Z2Y5 1582 aa26.41■■□□□ 1.82
PARVB-202ENST00000402876 MYBBP1AQ9BQG0 1328 aaKnown RBP26.41■■□□□ 1.82
PARVB-202ENST00000402876 MSH6P52701 1360 aa26.41■■□□□ 1.82
PARVB-202ENST00000402876 POLR3AO14802 1390 aaPredicted RBP26.39■■□□□ 1.82
PARVB-202ENST00000402876 ACEP12821 1306 aa26.39■■□□□ 1.81
PARVB-202ENST00000402876 KIF1AQ12756 1690 aa26.38■■□□□ 1.81
PARVB-202ENST00000402876 ATF3P18847 181 aa26.38■■□□□ 1.81
PARVB-202ENST00000402876 USP6P35125 1406 aa26.35■■□□□ 1.81
PARVB-202ENST00000402876 NGDNQ8NEJ9 315 aaKnown RBP26.35■■□□□ 1.81
PARVB-202ENST00000402876 CADPS2Q86UW7 1296 aa26.34■■□□□ 1.81
PARVB-202ENST00000402876 PMFBP1Q8TBY8 1022 aa26.34■■□□□ 1.81
PARVB-202ENST00000402876 PHF8Q9UPP1 1060 aa26.34■■□□□ 1.81
PARVB-202ENST00000402876 C1orf167Q5SNV9 1468 aa26.34■■□□□ 1.81
PARVB-202ENST00000402876 MST1RQ04912 1400 aa26.33■■□□□ 1.81
PARVB-202ENST00000402876 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.8
PARVB-202ENST00000402876 MORC1Q86VD1 984 aa26.32■■□□□ 1.8
PARVB-202ENST00000402876 NLRP13Q86W25 1043 aa26.31■■□□□ 1.8
PARVB-202ENST00000402876 ESCO1Q5FWF5 840 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms