RNA–Protein interactions for RNA: ENST00000402271.5

HDAC11-203, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-203ENST00000402271 MYOM2P54296 1465 aa28.65■■■□□ 2.18
HDAC11-203ENST00000402271 NUTM2BA6NNL0 878 aaPredicted RBP28.63■■■□□ 2.17
HDAC11-203ENST00000402271 NUTM2EB1AL46 878 aaPredicted RBP28.63■■■□□ 2.17
HDAC11-203ENST00000402271 TMEM132EQ6IEE7 984 aa28.63■■■□□ 2.17
HDAC11-203ENST00000402271 NUTM2AQ8IVF1 878 aaPredicted RBP28.63■■■□□ 2.17
HDAC11-203ENST00000402271 STK26Q9P289 416 aa28.63■■■□□ 2.17
HDAC11-203ENST00000402271 SOS2Q07890 1332 aaPredicted RBP28.63■■■□□ 2.17
HDAC11-203ENST00000402271 YTHDC2Q9H6S0 1430 aaKnown RBP28.61■■■□□ 2.17
HDAC11-203ENST00000402271 C14orf93Q9H972 538 aaKnown RBP28.61■■■□□ 2.17
HDAC11-203ENST00000402271 WAPLQ7Z5K2 1190 aa28.6■■■□□ 2.17
HDAC11-203ENST00000402271 HRCP23327 699 aa28.58■■■□□ 2.17
HDAC11-203ENST00000402271 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
HDAC11-203ENST00000402271 PLEKHH1Q9ULM0 1364 aa28.57■■■□□ 2.16
HDAC11-203ENST00000402271 AFF2P51816 1311 aa28.53■■■□□ 2.16
HDAC11-203ENST00000402271 ESCO1Q5FWF5 840 aa28.53■■■□□ 2.16
HDAC11-203ENST00000402271 CFAP70Q5T0N1 1121 aa28.53■■■□□ 2.16
HDAC11-203ENST00000402271 DHX57Q6P158 1386 aaKnown RBP28.52■■■□□ 2.16
HDAC11-203ENST00000402271 NPHP3Q7Z494 1330 aa28.52■■■□□ 2.16
HDAC11-203ENST00000402271 FMN2Q9NZ56 1722 aa28.52■■■□□ 2.16
HDAC11-203ENST00000402271 COL22A1Q8NFW1 1626 aaPredicted RBP28.51■■■□□ 2.15
HDAC11-203ENST00000402271 PXDNQ92626 1479 aa28.5■■■□□ 2.15
HDAC11-203ENST00000402271 C8orf37Q96NL8 207 aa28.49■■■□□ 2.15
HDAC11-203ENST00000402271 RXRBP28702 533 aa28.48■■■□□ 2.15
HDAC11-203ENST00000402271 CDK12Q9NYV4 1490 aaPredicted RBP28.47■■■□□ 2.15
HDAC11-203ENST00000402271 DLC1Q96QB1 1528 aa28.45■■■□□ 2.15
HDAC11-203ENST00000402271 NUTM2FA1L443 756 aa28.45■■■□□ 2.14
HDAC11-203ENST00000402271 FOXO3O43524 673 aa28.45■■■□□ 2.14
HDAC11-203ENST00000402271 ADGRB1O14514 1584 aa28.44■■■□□ 2.14
HDAC11-203ENST00000402271 KIF1AQ12756 1690 aa28.43■■■□□ 2.14
HDAC11-203ENST00000402271 ADAMTS2O95450 1211 aa28.43■■■□□ 2.14
HDAC11-203ENST00000402271 STAC3Q96MF2 364 aa28.42■■■□□ 2.14
HDAC11-203ENST00000402271 NGLY1Q96IV0 654 aa28.41■■■□□ 2.14
HDAC11-203ENST00000402271 PRAM1Q96QH2 718 aa28.4■■■□□ 2.14
HDAC11-203ENST00000402271 XPCQ01831 940 aaPredicted RBP28.39■■■□□ 2.14
HDAC11-203ENST00000402271 QTRT2Q9H974 415 aaKnown RBP28.39■■■□□ 2.14
HDAC11-203ENST00000402271 DCAF11Q8TEB1 546 aa28.38■■■□□ 2.13
HDAC11-203ENST00000402271 RBM6P78332 1123 aaKnown RBP28.37■■■□□ 2.13
HDAC11-203ENST00000402271 KDM2AQ9Y2K7 1162 aa28.36■■■□□ 2.13
HDAC11-203ENST00000402271 RGPD8O14715 1765 aaPredicted RBP28.36■■■□□ 2.13
HDAC11-203ENST00000402271 ADGRB2O60241 1585 aa28.36■■■□□ 2.13
HDAC11-203ENST00000402271 FNBP4Q8N3X1 1017 aaPredicted RBP28.35■■■□□ 2.13
HDAC11-203ENST00000402271 SAFB2Q14151 953 aaKnown RBP eCLIP28.34■■■□□ 2.13
HDAC11-203ENST00000402271 POGKQ9P215 609 aa28.34■■■□□ 2.13
HDAC11-203ENST00000402271 MARF1Q9Y4F3 1742 aaKnown RBP28.33■■■□□ 2.13
HDAC11-203ENST00000402271 PHF8Q9UPP1 1060 aa28.33■■■□□ 2.13
HDAC11-203ENST00000402271 SPATA31A3Q5VYP0 1347 aa28.33■■■□□ 2.13
HDAC11-203ENST00000402271 USP21Q9UK80 565 aa28.32■■■□□ 2.12
HDAC11-203ENST00000402271 KRT28Q7Z3Y7 464 aa28.31■■■□□ 2.12
HDAC11-203ENST00000402271 UPF1Q92900 1129 aaKnown RBP eCLIP28.31■■■□□ 2.122e-9■■■■■ 54.2
HDAC11-203ENST00000402271 TRAK1Q9UPV9 953 aa28.31■■■□□ 2.12
HDAC11-203ENST00000402271 RGS12O14924 1447 aa28.31■■■□□ 2.12
HDAC11-203ENST00000402271 ANKARQ7Z5J8 1434 aa28.31■■■□□ 2.12
HDAC11-203ENST00000402271 USP32Q8NFA0 1604 aa28.3■■■□□ 2.12
HDAC11-203ENST00000402271 TRPC5Q9UL62 973 aaPredicted RBP28.28■■■□□ 2.12
HDAC11-203ENST00000402271 ATRNO75882 1429 aa28.26■■■□□ 2.12
HDAC11-203ENST00000402271 TNS3Q68CZ2 1445 aa28.26■■■□□ 2.11
HDAC11-203ENST00000402271 PSME1Q06323 249 aa28.25■■■□□ 2.11
HDAC11-203ENST00000402271 BCL9LQ86UU0 1499 aa28.25■■■□□ 2.11
HDAC11-203ENST00000402271 SBNO1A3KN83 1393 aa28.24■■■□□ 2.11
HDAC11-203ENST00000402271 EIF3AQ14152 1382 aaKnown RBP28.23■■■□□ 2.11
HDAC11-203ENST00000402271 ARHGEF28Q8N1W1 1705 aaKnown RBP28.22■■■□□ 2.11
HDAC11-203ENST00000402271 HIRIP3Q9BW71 556 aaPredicted RBP28.22■■■□□ 2.11
HDAC11-203ENST00000402271 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
HDAC11-203ENST00000402271 TULP4Q9NRJ4 1543 aa28.21■■■□□ 2.11
HDAC11-203ENST00000402271 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.19■■■□□ 2.1
HDAC11-203ENST00000402271 KIAA1210Q9ULL0 1709 aa28.19■■■□□ 2.1
HDAC11-203ENST00000402271 WASLO00401 505 aaPredicted RBP28.19■■■□□ 2.1
HDAC11-203ENST00000402271 PMFBP1Q8TBY8 1022 aa28.18■■■□□ 2.1
HDAC11-203ENST00000402271 SLIT2O94813 1529 aa28.18■■■□□ 2.1
HDAC11-203ENST00000402271 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
HDAC11-203ENST00000402271 ARHGEF10O15013 1369 aa28.17■■■□□ 2.1
HDAC11-203ENST00000402271 TRPM3Q9HCF6 1732 aaPredicted RBP28.15■■■□□ 2.1
HDAC11-203ENST00000402271 ABCA3Q99758 1704 aa28.15■■■□□ 2.1
HDAC11-203ENST00000402271 UNC5CLQ8IV45 518 aa28.12■■■□□ 2.09
HDAC11-203ENST00000402271 GJD4Q96KN9 370 aaPredicted RBP28.12■■■□□ 2.09
HDAC11-203ENST00000402271 CABLES1Q8TDN4 633 aa28.11■■■□□ 2.09
HDAC11-203ENST00000402271 GPRASP1Q5JY77 1395 aa28.11■■■□□ 2.09
HDAC11-203ENST00000402271 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
HDAC11-203ENST00000402271 HAP1P54257 671 aaPredicted RBP28.1■■■□□ 2.09
HDAC11-203ENST00000402271 LMOD2Q6P5Q4 547 aa28.1■■■□□ 2.09
HDAC11-203ENST00000402271 ALS2Q96Q42 1657 aa28.1■■■□□ 2.09
HDAC11-203ENST00000402271 ATP7BP35670 1465 aa28.09■■■□□ 2.09
HDAC11-203ENST00000402271 ITSN1Q15811 1721 aa28.09■■■□□ 2.09
HDAC11-203ENST00000402271 NWD2Q9ULI1 1742 aa28.07■■■□□ 2.08
HDAC11-203ENST00000402271 GLI3P10071 1580 aa28.07■■■□□ 2.08
HDAC11-203ENST00000402271 RALGAPBQ86X10 1494 aa28.06■■■□□ 2.08
HDAC11-203ENST00000402271 PLCH1Q4KWH8 1693 aa28.06■■■□□ 2.08
HDAC11-203ENST00000402271 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
HDAC11-203ENST00000402271 NBPF1Q3BBV0 1214 aa28.04■■■□□ 2.08
HDAC11-203ENST00000402271 NGDNQ8NEJ9 315 aaKnown RBP28.04■■■□□ 2.08
HDAC11-203ENST00000402271 PLEKHG5O94827 1062 aa28.02■■■□□ 2.08
HDAC11-203ENST00000402271 CDK19Q9BWU1 502 aa28.02■■■□□ 2.08
HDAC11-203ENST00000402271 VPS72Q15906 364 aa28.01■■■□□ 2.07
HDAC11-203ENST00000402271 TOPAZ1Q8N9V7 1692 aa28■■■□□ 2.07
HDAC11-203ENST00000402271 CRYBG1Q9Y4K1 1723 aa27.99■■■□□ 2.07
HDAC11-203ENST00000402271 FAM83GA6ND36 823 aa27.98■■■□□ 2.07
HDAC11-203ENST00000402271 L3MBTL2Q969R5 705 aa27.97■■■□□ 2.07
HDAC11-203ENST00000402271 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
HDAC11-203ENST00000402271 CCDC61Q9Y6R9 512 aa27.96■■■□□ 2.07
HDAC11-203ENST00000402271 NRAPQ86VF7 1730 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms