RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 FAM117AQ9C073 453 aa14.08□□□□□ -0.16
PRAMEF1-202ENST00000400814 MAP2K5Q13163 448 aa14.07□□□□□ -0.16
PRAMEF1-202ENST00000400814 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
PRAMEF1-202ENST00000400814 RAPGEF3O95398 923 aa14.06□□□□□ -0.16
PRAMEF1-202ENST00000400814 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
PRAMEF1-202ENST00000400814 BOLA1Q9Y3E2 137 aa14.06□□□□□ -0.16
PRAMEF1-202ENST00000400814 RICTORQ6R327 1708 aa14.05□□□□□ -0.16
PRAMEF1-202ENST00000400814 CCDC102AQ96A19 550 aa14.05□□□□□ -0.16
PRAMEF1-202ENST00000400814 ERBINQ96RT1 1412 aa14.04□□□□□ -0.16
PRAMEF1-202ENST00000400814 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
PRAMEF1-202ENST00000400814 IRF6O14896 467 aa14.04□□□□□ -0.16
PRAMEF1-202ENST00000400814 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
PRAMEF1-202ENST00000400814 OSBPP22059 807 aa14.03□□□□□ -0.16
PRAMEF1-202ENST00000400814 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
PRAMEF1-202ENST00000400814 MPHOSPH9Q99550 1183 aa14.03□□□□□ -0.16
PRAMEF1-202ENST00000400814 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.16
PRAMEF1-202ENST00000400814 OCEL1Q9H607 264 aa14.02□□□□□ -0.17
PRAMEF1-202ENST00000400814 FRMPD1Q5SYB0 1578 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 GNPATO15228 680 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 AMHR2Q16671 573 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 DDRGK1Q96HY6 314 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 COL17A1Q9UMD9 1497 aaPredicted RBP14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 KDM5DQ9BY66 1539 aa14.01□□□□□ -0.17
PRAMEF1-202ENST00000400814 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
PRAMEF1-202ENST00000400814 G3V3G9 751 aa14□□□□□ -0.17
PRAMEF1-202ENST00000400814 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
PRAMEF1-202ENST00000400814 PZPP20742 1482 aa14□□□□□ -0.17
PRAMEF1-202ENST00000400814 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
PRAMEF1-202ENST00000400814 NUP155O75694 1391 aa13.99□□□□□ -0.17
PRAMEF1-202ENST00000400814 UNC13BO14795 1591 aa13.98□□□□□ -0.17
PRAMEF1-202ENST00000400814 A2MP01023 1474 aa13.98□□□□□ -0.17
PRAMEF1-202ENST00000400814 PTGER2P43116 358 aa13.98□□□□□ -0.17
PRAMEF1-202ENST00000400814 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRAMEF1-202ENST00000400814 FCHSD2O94868 740 aa13.97□□□□□ -0.17
PRAMEF1-202ENST00000400814 HIC1Q14526 733 aa13.97□□□□□ -0.17
PRAMEF1-202ENST00000400814 PARP9Q8IXQ6 854 aa13.97□□□□□ -0.17
PRAMEF1-202ENST00000400814 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
PRAMEF1-202ENST00000400814 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
PRAMEF1-202ENST00000400814 IER5LQ5T953 404 aa13.96□□□□□ -0.17
PRAMEF1-202ENST00000400814 OXER1Q8TDS5 423 aa13.96□□□□□ -0.17
PRAMEF1-202ENST00000400814 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.17
PRAMEF1-202ENST00000400814 CLCN6P51797 869 aa13.95□□□□□ -0.18
PRAMEF1-202ENST00000400814 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
PRAMEF1-202ENST00000400814 KIF3BO15066 747 aa13.94□□□□□ -0.18
PRAMEF1-202ENST00000400814 FECHP22830 423 aa13.94□□□□□ -0.18
PRAMEF1-202ENST00000400814 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
PRAMEF1-202ENST00000400814 DEPDC5O75140 1603 aa13.94□□□□□ -0.18
PRAMEF1-202ENST00000400814 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
PRAMEF1-202ENST00000400814 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
PRAMEF1-202ENST00000400814 DDX12PQ92771 950 aa13.93□□□□□ -0.18
PRAMEF1-202ENST00000400814 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
PRAMEF1-202ENST00000400814 ANKRD30BQ9BXX2 1392 aa13.93□□□□□ -0.18
PRAMEF1-202ENST00000400814 ATP10AO60312 1499 aa13.92□□□□□ -0.18
PRAMEF1-202ENST00000400814 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
PRAMEF1-202ENST00000400814 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
PRAMEF1-202ENST00000400814 TBC1D12O60347 775 aa13.9□□□□□ -0.18
PRAMEF1-202ENST00000400814 TMEM92Q6UXU6 159 aa13.9□□□□□ -0.18
PRAMEF1-202ENST00000400814 L3MBTL3Q96JM7 780 aaPredicted RBP13.9□□□□□ -0.18
PRAMEF1-202ENST00000400814 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
PRAMEF1-202ENST00000400814 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.18
PRAMEF1-202ENST00000400814 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
PRAMEF1-202ENST00000400814 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.19
PRAMEF1-202ENST00000400814 PRDM15P57071 1507 aaPredicted RBP13.89□□□□□ -0.19
PRAMEF1-202ENST00000400814 PLCG2P16885 1265 aa13.89□□□□□ -0.19
PRAMEF1-202ENST00000400814 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
PRAMEF1-202ENST00000400814 KANK1Q14678 1352 aa13.88□□□□□ -0.19
PRAMEF1-202ENST00000400814 AGLP35573 1532 aa13.88□□□□□ -0.19
PRAMEF1-202ENST00000400814 NEUROD1Q13562 356 aa13.88□□□□□ -0.19
PRAMEF1-202ENST00000400814 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
PRAMEF1-202ENST00000400814 EVI5O60447 810 aa13.86□□□□□ -0.19
PRAMEF1-202ENST00000400814 PTGDRQ13258 359 aa13.86□□□□□ -0.19
PRAMEF1-202ENST00000400814 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
PRAMEF1-202ENST00000400814 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
PRAMEF1-202ENST00000400814 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
PRAMEF1-202ENST00000400814 GGT6Q6P531 493 aa13.85□□□□□ -0.19
PRAMEF1-202ENST00000400814 FLIIQ13045 1269 aa13.84□□□□□ -0.19
PRAMEF1-202ENST00000400814 TET3O43151 1660 aa13.84□□□□□ -0.19
PRAMEF1-202ENST00000400814 RPRD2Q5VT52 1461 aaKnown RBP13.83□□□□□ -0.2
PRAMEF1-202ENST00000400814 PLA2R1Q13018 1463 aa13.82□□□□□ -0.2
PRAMEF1-202ENST00000400814 E9PCH4 1651 aa13.81□□□□□ -0.2
PRAMEF1-202ENST00000400814 PTPRTO14522 1441 aa13.81□□□□□ -0.2
PRAMEF1-202ENST00000400814 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
PRAMEF1-202ENST00000400814 HAX1O00165 279 aa13.8□□□□□ -0.2
PRAMEF1-202ENST00000400814 EVX2Q03828 476 aa13.8□□□□□ -0.2
PRAMEF1-202ENST00000400814 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
PRAMEF1-202ENST00000400814 SIGLEC1Q9BZZ2 1709 aa13.8□□□□□ -0.2
PRAMEF1-202ENST00000400814 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
PRAMEF1-202ENST00000400814 ABCC3O15438 1527 aa13.79□□□□□ -0.2
PRAMEF1-202ENST00000400814 MS4A1P11836 297 aa13.79□□□□□ -0.2
PRAMEF1-202ENST00000400814 TONSLQ96HA7 1378 aa13.79□□□□□ -0.2
PRAMEF1-202ENST00000400814 CEP152O94986 1710 aa13.78□□□□□ -0.2
PRAMEF1-202ENST00000400814 EFCAB6Q5THR3 1501 aa13.78□□□□□ -0.2
PRAMEF1-202ENST00000400814 ARHGAP31Q2M1Z3 1444 aa13.78□□□□□ -0.2
PRAMEF1-202ENST00000400814 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
PRAMEF1-202ENST00000400814 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
PRAMEF1-202ENST00000400814 REPIN1Q9BWE0 567 aaKnown RBP13.77□□□□□ -0.21
PRAMEF1-202ENST00000400814 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms