RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 RRBP1Q9P2E9 1410 aaKnown RBP27.77■■■□□ 2.04
COL4A2-202ENST00000400163 ATRNO75882 1429 aa27.75■■■□□ 2.03
COL4A2-202ENST00000400163 ESCO1Q5FWF5 840 aa27.75■■■□□ 2.03
COL4A2-202ENST00000400163 SLC4A1APQ9BWU0 796 aaKnown RBP27.74■■■□□ 2.03
COL4A2-202ENST00000400163 NPHP3Q7Z494 1330 aa27.73■■■□□ 2.03
COL4A2-202ENST00000400163 MYOM2P54296 1465 aa27.72■■■□□ 2.03
COL4A2-202ENST00000400163 CDC42BPGQ6DT37 1551 aa27.71■■■□□ 2.03
COL4A2-202ENST00000400163 PXDNQ92626 1479 aa27.7■■■□□ 2.02
COL4A2-202ENST00000400163 FOXO3O43524 673 aa27.69■■■□□ 2.02
COL4A2-202ENST00000400163 MARF1Q9Y4F3 1742 aaKnown RBP27.68■■■□□ 2.02
COL4A2-202ENST00000400163 XPCQ01831 940 aaPredicted RBP27.68■■■□□ 2.02
COL4A2-202ENST00000400163 BCL9LQ86UU0 1499 aa27.68■■■□□ 2.02
COL4A2-202ENST00000400163 ADGRF5Q8IZF2 1346 aa27.66■■■□□ 2.02
COL4A2-202ENST00000400163 NUTM2FA1L443 756 aa27.64■■■□□ 2.02
COL4A2-202ENST00000400163 WAPLQ7Z5K2 1190 aa27.64■■■□□ 2.02
COL4A2-202ENST00000400163 STK26Q9P289 416 aa27.64■■■□□ 2.02
COL4A2-202ENST00000400163 FOXD1Q16676 465 aa27.63■■■□□ 2.01
COL4A2-202ENST00000400163 ZRANB1Q9UGI0 708 aa27.63■■■□□ 2.01
COL4A2-202ENST00000400163 LRPPRCP42704 1394 aaKnown RBP27.62■■■□□ 2.01
COL4A2-202ENST00000400163 GJD4Q96KN9 370 aaPredicted RBP27.62■■■□□ 2.01
COL4A2-202ENST00000400163 TECPR2O15040 1411 aa27.61■■■□□ 2.01
COL4A2-202ENST00000400163 CCDC125Q86Z20 511 aa27.61■■■□□ 2.01
COL4A2-202ENST00000400163 RGL3Q3MIN7 710 aa27.59■■■□□ 2.01
COL4A2-202ENST00000400163 ABCC11Q96J66 1382 aa27.57■■■□□ 2
COL4A2-202ENST00000400163 PLEKHH1Q9ULM0 1364 aa27.57■■■□□ 2
COL4A2-202ENST00000400163 CCDC144AA2RUR9 1427 aa27.57■■■□□ 2
COL4A2-202ENST00000400163 TMEM132EQ6IEE7 984 aa27.56■■■□□ 2
COL4A2-202ENST00000400163 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.55■■■□□ 2
COL4A2-202ENST00000400163 UNC5CLQ8IV45 518 aa27.55■■■□□ 2
COL4A2-202ENST00000400163 ANKRD30BQ9BXX2 1392 aa27.55■■■□□ 2
COL4A2-202ENST00000400163 SPATA31E1Q6ZUB1 1445 aa27.55■■■□□ 2
COL4A2-202ENST00000400163 IFT172Q9UG01 1749 aa27.55■■■□□ 2
COL4A2-202ENST00000400163 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
COL4A2-202ENST00000400163 KNDC1Q76NI1 1749 aa27.54■■■□□ 2
COL4A2-202ENST00000400163 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
COL4A2-202ENST00000400163 SLIT2O94813 1529 aa27.52■■■□□ 2
COL4A2-202ENST00000400163 RALGAPBQ86X10 1494 aa27.51■■■□□ 2
COL4A2-202ENST00000400163 KIF1AQ12756 1690 aa27.51■■□□□ 1.99
COL4A2-202ENST00000400163 GLI3P10071 1580 aa27.51■■□□□ 1.99
COL4A2-202ENST00000400163 SRCAPQ6ZRS2 3230 aa27.5■■□□□ 1.99
COL4A2-202ENST00000400163 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
COL4A2-202ENST00000400163 EP400Q96L91 3159 aa27.5■■□□□ 1.99
COL4A2-202ENST00000400163 PIK3C2GO75747 1445 aa27.49■■□□□ 1.99
COL4A2-202ENST00000400163 YTHDC2Q9H6S0 1430 aaKnown RBP27.48■■□□□ 1.99
COL4A2-202ENST00000400163 USP32Q8NFA0 1604 aa27.47■■□□□ 1.99
COL4A2-202ENST00000400163 BRWD3Q6RI45 1802 aa27.46■■□□□ 1.99
COL4A2-202ENST00000400163 RGPD8O14715 1765 aaPredicted RBP27.46■■□□□ 1.99
COL4A2-202ENST00000400163 MPHOSPH9Q99550 1183 aa27.46■■□□□ 1.99
COL4A2-202ENST00000400163 BLMP54132 1417 aaPredicted RBP27.45■■□□□ 1.98
COL4A2-202ENST00000400163 SIRT1Q96EB6 747 aa27.45■■□□□ 1.98
COL4A2-202ENST00000400163 HAP1P54257 671 aaPredicted RBP27.43■■□□□ 1.98
COL4A2-202ENST00000400163 PHF8Q9UPP1 1060 aa27.43■■□□□ 1.98
COL4A2-202ENST00000400163 CABLES1Q8TDN4 633 aa27.42■■□□□ 1.98
COL4A2-202ENST00000400163 TNS3Q68CZ2 1445 aa27.41■■□□□ 1.98
COL4A2-202ENST00000400163 PSME1Q06323 249 aa27.41■■□□□ 1.98
COL4A2-202ENST00000400163 SEPT12Q8IYM1 358 aa27.41■■□□□ 1.98
COL4A2-202ENST00000400163 C14orf93Q9H972 538 aaKnown RBP27.41■■□□□ 1.98
COL4A2-202ENST00000400163 VPS72Q15906 364 aa27.4■■□□□ 1.98
COL4A2-202ENST00000400163 PLEKHG5O94827 1062 aa27.39■■□□□ 1.98
COL4A2-202ENST00000400163 DEFB132Q7Z7B7 95 aa27.39■■□□□ 1.98
COL4A2-202ENST00000400163 PLCH1Q4KWH8 1693 aa27.36■■□□□ 1.97
COL4A2-202ENST00000400163 NWD2Q9ULI1 1742 aa27.36■■□□□ 1.97
COL4A2-202ENST00000400163 ONECUT3O60422 494 aaPredicted RBP27.36■■□□□ 1.97
COL4A2-202ENST00000400163 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
COL4A2-202ENST00000400163 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
COL4A2-202ENST00000400163 DHX57Q6P158 1386 aaKnown RBP27.35■■□□□ 1.97
COL4A2-202ENST00000400163 SF3B2Q13435 895 aaKnown RBP27.35■■□□□ 1.97
COL4A2-202ENST00000400163 LMOD2Q6P5Q4 547 aa27.35■■□□□ 1.97
COL4A2-202ENST00000400163 CCDC9Q9Y3X0 531 aaKnown RBP27.35■■□□□ 1.97
COL4A2-202ENST00000400163 NRXN1Q9ULB1 1477 aa27.35■■□□□ 1.97
COL4A2-202ENST00000400163 ABCA3Q99758 1704 aa27.33■■□□□ 1.97
COL4A2-202ENST00000400163 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.97
COL4A2-202ENST00000400163 PRAM1Q96QH2 718 aa27.33■■□□□ 1.97
COL4A2-202ENST00000400163 ARHGEF10O15013 1369 aa27.32■■□□□ 1.96
COL4A2-202ENST00000400163 FAM83GA6ND36 823 aa27.31■■□□□ 1.96
COL4A2-202ENST00000400163 KRT27Q7Z3Y8 459 aa27.31■■□□□ 1.96
COL4A2-202ENST00000400163 PMFBP1Q8TBY8 1022 aa27.29■■□□□ 1.96
COL4A2-202ENST00000400163 POGKQ9P215 609 aa27.27■■□□□ 1.96
COL4A2-202ENST00000400163 ANKARQ7Z5J8 1434 aa27.26■■□□□ 1.95
COL4A2-202ENST00000400163 DLC1Q96QB1 1528 aa27.24■■□□□ 1.95
COL4A2-202ENST00000400163 A0A0G2JS52 829 aa27.23■■□□□ 1.95
COL4A2-202ENST00000400163 MYT1Q01538 1121 aa27.23■■□□□ 1.95
COL4A2-202ENST00000400163 NRAPQ86VF7 1730 aa27.22■■□□□ 1.95
COL4A2-202ENST00000400163 FAM98CQ17RN3 349 aaKnown RBP27.21■■□□□ 1.95
COL4A2-202ENST00000400163 BTG4Q9NY30 223 aa27.21■■□□□ 1.95
COL4A2-202ENST00000400163 ADGRB2O60241 1585 aa27.21■■□□□ 1.95
COL4A2-202ENST00000400163 TRPM3Q9HCF6 1732 aaPredicted RBP27.21■■□□□ 1.95
COL4A2-202ENST00000400163 ACIN1Q9UKV3 1341 aaKnown RBP27.2■■□□□ 1.95
COL4A2-202ENST00000400163 LRP5O75197 1615 aa27.19■■□□□ 1.94
COL4A2-202ENST00000400163 BAG6P46379 1132 aa27.19■■□□□ 1.94
COL4A2-202ENST00000400163 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
COL4A2-202ENST00000400163 GPRASP1Q5JY77 1395 aa27.18■■□□□ 1.94
COL4A2-202ENST00000400163 ALS2Q96Q42 1657 aa27.17■■□□□ 1.94
COL4A2-202ENST00000400163 TRAK1Q9UPV9 953 aa27.17■■□□□ 1.94
COL4A2-202ENST00000400163 ADGRB1O14514 1584 aa27.17■■□□□ 1.94
COL4A2-202ENST00000400163 COL14A1Q05707 1796 aaKnown RBP27.17■■□□□ 1.94
COL4A2-202ENST00000400163 PSDA5PKW4 1024 aaPredicted RBP27.16■■□□□ 1.94
COL4A2-202ENST00000400163 PRR36Q9H6K5 1346 aa27.16■■□□□ 1.94
COL4A2-202ENST00000400163 MINK1Q8N4C8 1332 aaPredicted RBP27.15■■□□□ 1.94
COL4A2-202ENST00000400163 EIF3AQ14152 1382 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms