RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 HSPA2P54652 639 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 NALCNQ8IZF0 1738 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 DISP3Q9P2K9 1392 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 TOPAZ1Q8N9V7 1692 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 WASHC2AQ641Q2 1341 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 KIF7Q2M1P5 1343 aa9.56□□□□□ -0.88
USP16-203ENST00000399975 FMN2Q9NZ56 1722 aa9.56□□□□□ -0.88
USP16-203ENST00000399975 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
USP16-203ENST00000399975 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
USP16-203ENST00000399975 PLEKHH1Q9ULM0 1364 aa9.56□□□□□ -0.88
USP16-203ENST00000399975 XIRP1Q702N8 1843 aaKnown RBP9.56□□□□□ -0.88
USP16-203ENST00000399975 NINLQ9Y2I6 1382 aa9.55□□□□□ -0.88
USP16-203ENST00000399975 STK26Q9P289 416 aa9.55□□□□□ -0.88
USP16-203ENST00000399975 ITSN1Q15811 1721 aa9.55□□□□□ -0.88
USP16-203ENST00000399975 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
USP16-203ENST00000399975 POGKQ9P215 609 aa9.54□□□□□ -0.88
USP16-203ENST00000399975 ADGRL3Q9HAR2 1447 aa9.54□□□□□ -0.88
USP16-203ENST00000399975 USP32Q8NFA0 1604 aa9.53□□□□□ -0.88
USP16-203ENST00000399975 DCCP43146 1447 aa9.53□□□□□ -0.88
USP16-203ENST00000399975 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
USP16-203ENST00000399975 ANKARQ7Z5J8 1434 aa9.53□□□□□ -0.88
USP16-203ENST00000399975 ATAD2Q6PL18 1390 aa9.53□□□□□ -0.88
USP16-203ENST00000399975 WAPLQ7Z5K2 1190 aa9.52□□□□□ -0.88
USP16-203ENST00000399975 AKAP12Q02952 1782 aa9.52□□□□□ -0.89
USP16-203ENST00000399975 LTBP4Q8N2S1 1624 aa9.52□□□□□ -0.89
USP16-203ENST00000399975 LRRC7Q96NW7 1537 aa9.51□□□□□ -0.89
USP16-203ENST00000399975 WASLO00401 505 aaPredicted RBP9.51□□□□□ -0.89
USP16-203ENST00000399975 ATP7BP35670 1465 aa9.51□□□□□ -0.89
USP16-203ENST00000399975 MON2Q7Z3U7 1717 aa9.5□□□□□ -0.89
USP16-203ENST00000399975 MINK1Q8N4C8 1332 aaPredicted RBP9.49□□□□□ -0.89
USP16-203ENST00000399975 CDK19Q9BWU1 502 aa9.49□□□□□ -0.89
USP16-203ENST00000399975 SENP3Q9H4L4 574 aaPredicted RBP9.49□□□□□ -0.89
USP16-203ENST00000399975 KIF1AQ12756 1690 aa9.48□□□□□ -0.89
USP16-203ENST00000399975 CD163L1Q9NR16 1453 aa9.48□□□□□ -0.89
USP16-203ENST00000399975 RGPD8O14715 1765 aaPredicted RBP9.48□□□□□ -0.89
USP16-203ENST00000399975 IQSEC2Q5JU85 1478 aa9.48□□□□□ -0.89
USP16-203ENST00000399975 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
USP16-203ENST00000399975 NPC1L1Q9UHC9 1359 aa9.47□□□□□ -0.89
USP16-203ENST00000399975 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
USP16-203ENST00000399975 ANKRD36BQ8N2N9 1353 aa9.47□□□□□ -0.89
USP16-203ENST00000399975 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
USP16-203ENST00000399975 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
USP16-203ENST00000399975 ANKRD26Q9UPS8 1709 aa9.47□□□□□ -0.89
USP16-203ENST00000399975 USP54Q70EL1 1684 aa9.46□□□□□ -0.89
USP16-203ENST00000399975 PLEKHG3A1L390 1219 aa9.46□□□□□ -0.9
USP16-203ENST00000399975 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.9
USP16-203ENST00000399975 C19orf44Q9H6X5 657 aa9.46□□□□□ -0.9
USP16-203ENST00000399975 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.9
USP16-203ENST00000399975 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
USP16-203ENST00000399975 POLR3AO14802 1390 aaPredicted RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 ZNF335Q9H4Z2 1342 aaPredicted RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
USP16-203ENST00000399975 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 DDX10Q13206 875 aaKnown RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
USP16-203ENST00000399975 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
USP16-203ENST00000399975 SRPK2P78362 688 aaKnown RBP9.45□□□□□ -0.9
USP16-203ENST00000399975 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
USP16-203ENST00000399975 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
USP16-203ENST00000399975 MST1RQ04912 1400 aa9.44□□□□□ -0.9
USP16-203ENST00000399975 MSH6P52701 1360 aa9.43□□□□□ -0.9
USP16-203ENST00000399975 PANK3Q9H999 370 aa9.43□□□□□ -0.9
USP16-203ENST00000399975 C1orf167Q5SNV9 1468 aa9.43□□□□□ -0.9
USP16-203ENST00000399975 NSD2O96028 1365 aa9.43□□□□□ -0.9
USP16-203ENST00000399975 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
USP16-203ENST00000399975 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
USP16-203ENST00000399975 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
USP16-203ENST00000399975 SCAF1Q9H7N4 1312 aaKnown RBP9.42□□□□□ -0.9
USP16-203ENST00000399975 A0A1W2PP64 1363 aa9.42□□□□□ -0.9
USP16-203ENST00000399975 EDC4Q6P2E9 1401 aaKnown RBP9.42□□□□□ -0.9
USP16-203ENST00000399975 TRPM3Q9HCF6 1732 aaPredicted RBP9.41□□□□□ -0.9
USP16-203ENST00000399975 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
USP16-203ENST00000399975 SLC12A5Q9H2X9 1139 aa9.41□□□□□ -0.9
USP16-203ENST00000399975 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
USP16-203ENST00000399975 HDGFL2Q7Z4V5 671 aaPredicted RBP9.4□□□□□ -0.9
USP16-203ENST00000399975 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
USP16-203ENST00000399975 USP6P35125 1406 aa9.4□□□□□ -0.9
USP16-203ENST00000399975 NHSL1Q5SYE7 1610 aa9.4□□□□□ -0.9
USP16-203ENST00000399975 NSD3Q9BZ95 1437 aa9.4□□□□□ -0.9
USP16-203ENST00000399975 PARD3Q8TEW0 1356 aa9.39□□□□□ -0.91
USP16-203ENST00000399975 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
USP16-203ENST00000399975 ATF3P18847 181 aa9.39□□□□□ -0.91
USP16-203ENST00000399975 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
USP16-203ENST00000399975 CGNL1Q0VF96 1302 aa9.39□□□□□ -0.91
USP16-203ENST00000399975 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
USP16-203ENST00000399975 RALBP1Q15311 655 aa9.38□□□□□ -0.91
USP16-203ENST00000399975 TMC1Q8TDI8 760 aa9.38□□□□□ -0.91
USP16-203ENST00000399975 ALS2Q96Q42 1657 aa9.38□□□□□ -0.91
USP16-203ENST00000399975 ACEP12821 1306 aa9.38□□□□□ -0.91
USP16-203ENST00000399975 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
USP16-203ENST00000399975 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
USP16-203ENST00000399975 C14orf37Q86TY3 774 aa9.37□□□□□ -0.91
USP16-203ENST00000399975 PHF8Q9UPP1 1060 aa9.37□□□□□ -0.91
USP16-203ENST00000399975 PIK3C2AO00443 1686 aa9.37□□□□□ -0.91
USP16-203ENST00000399975 USP31Q70CQ4 1352 aa9.37□□□□□ -0.91
USP16-203ENST00000399975 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
USP16-203ENST00000399975 ANP32CO43423 234 aa9.36□□□□□ -0.91
USP16-203ENST00000399975 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms