RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 GPATCH8Q9UKJ3 1502 aaKnown RBP17.53■□□□□ 0.4
PCDHGA11-201ENST00000398587 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
PCDHGA11-201ENST00000398587 CSPP1Q1MSJ5 1256 aa17.53■□□□□ 0.4
PCDHGA11-201ENST00000398587 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
PCDHGA11-201ENST00000398587 ATF3P18847 181 aa17.52■□□□□ 0.4
PCDHGA11-201ENST00000398587 WDR63Q8IWG1 891 aa17.52■□□□□ 0.4
PCDHGA11-201ENST00000398587 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
PCDHGA11-201ENST00000398587 NUTM2GQ5VZR2 741 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 KIF3AQ9Y496 699 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 RTEL1-TNFRSF6BF6WH68 1400 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 DRC7Q8IY82 874 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 RUFY2Q8WXA3 655 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 GPRASP1Q5JY77 1395 aa17.51■□□□□ 0.39
PCDHGA11-201ENST00000398587 CT47B1P0C2W7 299 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA11-201ENST00000398587 CHAF1AQ13111 956 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA11-201ENST00000398587 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
PCDHGA11-201ENST00000398587 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
PCDHGA11-201ENST00000398587 HSP90AB4PQ58FF6 505 aa17.49■□□□□ 0.39
PCDHGA11-201ENST00000398587 UGGT2Q9NYU1 1516 aa17.48■□□□□ 0.39
PCDHGA11-201ENST00000398587 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
PCDHGA11-201ENST00000398587 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
PCDHGA11-201ENST00000398587 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
PCDHGA11-201ENST00000398587 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
PCDHGA11-201ENST00000398587 BCAR3O75815 825 aa17.47■□□□□ 0.39
PCDHGA11-201ENST00000398587 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
PCDHGA11-201ENST00000398587 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
PCDHGA11-201ENST00000398587 TSR2Q969E8 191 aaKnown RBP17.46■□□□□ 0.39
PCDHGA11-201ENST00000398587 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
PCDHGA11-201ENST00000398587 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.38
PCDHGA11-201ENST00000398587 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.38
PCDHGA11-201ENST00000398587 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.38
PCDHGA11-201ENST00000398587 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
PCDHGA11-201ENST00000398587 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
PCDHGA11-201ENST00000398587 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
PCDHGA11-201ENST00000398587 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
PCDHGA11-201ENST00000398587 CCDC61Q9Y6R9 512 aa17.45■□□□□ 0.38
PCDHGA11-201ENST00000398587 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
PCDHGA11-201ENST00000398587 CHMP5Q9NZZ3 219 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 GNAI3P08754 354 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 ZKSCAN1P17029 563 aaPredicted RBP17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 SLC26A8Q96RN1 970 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 ATP10BO94823 1461 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 SKOR2Q2VWA4 1001 aaPredicted RBP17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
PCDHGA11-201ENST00000398587 PHF14O94880 888 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 UBTFL1P0CB47 393 aaPredicted RBP17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 POGZQ7Z3K3 1410 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 DDX49Q9Y6V7 483 aaKnown RBP17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 FCHSD2O94868 740 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 FANCAO15360 1455 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 ANO2Q9NQ90 1003 aa17.43■□□□□ 0.38
PCDHGA11-201ENST00000398587 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
PCDHGA11-201ENST00000398587 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
PCDHGA11-201ENST00000398587 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
PCDHGA11-201ENST00000398587 FOXD4L5Q5VV16 416 aaPredicted RBP17.42■□□□□ 0.38
PCDHGA11-201ENST00000398587 FOXD4L4Q8WXT5 416 aaPredicted RBP17.42■□□□□ 0.38
PCDHGA11-201ENST00000398587 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
PCDHGA11-201ENST00000398587 PDZRN3Q9UPQ7 1066 aa17.41■□□□□ 0.38
PCDHGA11-201ENST00000398587 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
PCDHGA11-201ENST00000398587 GSE1Q14687 1217 aa17.41■□□□□ 0.38
PCDHGA11-201ENST00000398587 TOMM22Q9NS69 142 aa17.41■□□□□ 0.38
PCDHGA11-201ENST00000398587 CDC45O75419 566 aa17.41■□□□□ 0.38
PCDHGA11-201ENST00000398587 NOB1Q9ULX3 412 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 MAPKBP1O60336 1514 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 TULP1O00294 542 aaPredicted RBP17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 ERC2O15083 957 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 ATF7IPQ6VMQ6 1270 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 WWC1Q8IX03 1113 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 IDI1Q13907 227 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 RIC3Q7Z5B4 369 aa17.4■□□□□ 0.38
PCDHGA11-201ENST00000398587 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
PCDHGA11-201ENST00000398587 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
PCDHGA11-201ENST00000398587 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
PCDHGA11-201ENST00000398587 ANKLE2Q86XL3 938 aa17.38■□□□□ 0.37
PCDHGA11-201ENST00000398587 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
PCDHGA11-201ENST00000398587 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
PCDHGA11-201ENST00000398587 RNF20Q5VTR2 975 aa17.37■□□□□ 0.37
PCDHGA11-201ENST00000398587 FAM135AQ9P2D6 1515 aa17.37■□□□□ 0.37
PCDHGA11-201ENST00000398587 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
PCDHGA11-201ENST00000398587 MVPQ14764 893 aaKnown RBP17.37■□□□□ 0.37
PCDHGA11-201ENST00000398587 PLCH2O75038 1416 aa17.37■□□□□ 0.37
PCDHGA11-201ENST00000398587 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA11-201ENST00000398587 H3BQV1 296 aa17.36■□□□□ 0.37
PCDHGA11-201ENST00000398587 TPM4P67936 248 aa17.36■□□□□ 0.37
PCDHGA11-201ENST00000398587 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-201ENST00000398587 SF3A1Q15459 793 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-201ENST00000398587 IFFO2Q5TF58 517 aa17.36■□□□□ 0.37
PCDHGA11-201ENST00000398587 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
PCDHGA11-201ENST00000398587 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
PCDHGA11-201ENST00000398587 TCOF1Q13428 1488 aaKnown RBP17.35■□□□□ 0.37
PCDHGA11-201ENST00000398587 RRS1Q15050 365 aaKnown RBP17.35■□□□□ 0.37
PCDHGA11-201ENST00000398587 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms