RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
MBD1-207ENST00000398488 ARHGEF28Q8N1W1 1705 aaKnown RBP22.6■■□□□ 1.21
MBD1-207ENST00000398488 ATF3P18847 181 aa22.59■■□□□ 1.21
MBD1-207ENST00000398488 CADPS2Q86UW7 1296 aa22.58■■□□□ 1.21
MBD1-207ENST00000398488 POGKQ9P215 609 aa22.58■■□□□ 1.21
MBD1-207ENST00000398488 DCCP43146 1447 aa22.58■■□□□ 1.2
MBD1-207ENST00000398488 MST1RQ04912 1400 aa22.58■■□□□ 1.2
MBD1-207ENST00000398488 ROCK2O75116 1388 aaKnown RBP22.58■■□□□ 1.2
MBD1-207ENST00000398488 RALGAPBQ86X10 1494 aa22.56■■□□□ 1.2
MBD1-207ENST00000398488 GPRASP1Q5JY77 1395 aa22.55■■□□□ 1.2
MBD1-207ENST00000398488 HIRIP3Q9BW71 556 aaPredicted RBP22.55■■□□□ 1.2
MBD1-207ENST00000398488 TIMELESSQ9UNS1 1208 aa22.55■■□□□ 1.2
MBD1-207ENST00000398488 MINK1Q8N4C8 1332 aaPredicted RBP22.54■■□□□ 1.2
MBD1-207ENST00000398488 ROBO1Q9Y6N7 1651 aa22.54■■□□□ 1.2
MBD1-207ENST00000398488 NUTM2FA1L443 756 aa22.53■■□□□ 1.2
MBD1-207ENST00000398488 CDC42BPGQ6DT37 1551 aa22.53■■□□□ 1.2
MBD1-207ENST00000398488 HSPA1LP34931 641 aa22.52■■□□□ 1.2
MBD1-207ENST00000398488 C1orf167Q5SNV9 1468 aa22.51■■□□□ 1.19
MBD1-207ENST00000398488 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
MBD1-207ENST00000398488 ORAI2Q96SN7 254 aa22.5■■□□□ 1.19
MBD1-207ENST00000398488 CARD11Q9BXL7 1154 aa22.5■■□□□ 1.19
MBD1-207ENST00000398488 FMN2Q9NZ56 1722 aa22.48■■□□□ 1.19
MBD1-207ENST00000398488 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
MBD1-207ENST00000398488 CENPJQ9HC77 1338 aaPredicted RBP22.47■■□□□ 1.19
MBD1-207ENST00000398488 DDX17Q92841 729 aaKnown RBP22.47■■□□□ 1.19
MBD1-207ENST00000398488 WASLO00401 505 aaPredicted RBP22.44■■□□□ 1.18
MBD1-207ENST00000398488 PRR36Q9H6K5 1346 aa22.44■■□□□ 1.18
MBD1-207ENST00000398488 USP32Q8NFA0 1604 aa22.43■■□□□ 1.18
MBD1-207ENST00000398488 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
MBD1-207ENST00000398488 RGPD8O14715 1765 aaPredicted RBP22.43■■□□□ 1.18
MBD1-207ENST00000398488 ESCO1Q5FWF5 840 aa22.41■■□□□ 1.18
MBD1-207ENST00000398488 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
MBD1-207ENST00000398488 TULP4Q9NRJ4 1543 aa22.38■■□□□ 1.17
MBD1-207ENST00000398488 AHDC1Q5TGY3 1603 aaPredicted RBP22.38■■□□□ 1.17
MBD1-207ENST00000398488 PHLPP1O60346 1717 aa22.37■■□□□ 1.17
MBD1-207ENST00000398488 NHSL1Q5SYE7 1610 aa22.36■■□□□ 1.17
MBD1-207ENST00000398488 EIF3AQ14152 1382 aaKnown RBP22.36■■□□□ 1.17
MBD1-207ENST00000398488 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
MBD1-207ENST00000398488 COL16A1Q07092 1604 aaPredicted RBP22.36■■□□□ 1.17
MBD1-207ENST00000398488 ANKARQ7Z5J8 1434 aa22.35■■□□□ 1.17
MBD1-207ENST00000398488 NUDT16Q96DE0 195 aaKnown RBP22.35■■□□□ 1.17
MBD1-207ENST00000398488 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
MBD1-207ENST00000398488 ATP7BP35670 1465 aa22.35■■□□□ 1.17
MBD1-207ENST00000398488 FOXO3O43524 673 aa22.34■■□□□ 1.17
MBD1-207ENST00000398488 USP47Q96K76 1375 aa22.34■■□□□ 1.17
MBD1-207ENST00000398488 XPCQ01831 940 aaPredicted RBP22.33■■□□□ 1.17
MBD1-207ENST00000398488 PMFBP1Q8TBY8 1022 aa22.33■■□□□ 1.17
MBD1-207ENST00000398488 TESK2Q96S53 571 aa22.33■■□□□ 1.17
MBD1-207ENST00000398488 PHF8Q9UPP1 1060 aa22.33■■□□□ 1.17
MBD1-207ENST00000398488 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
MBD1-207ENST00000398488 SBNO2Q9Y2G9 1366 aa22.3■■□□□ 1.16
MBD1-207ENST00000398488 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
MBD1-207ENST00000398488 PXDNQ92626 1479 aa22.29■■□□□ 1.16
MBD1-207ENST00000398488 EVC2Q86UK5 1308 aa22.28■■□□□ 1.16
MBD1-207ENST00000398488 KIF1AQ12756 1690 aa22.27■■□□□ 1.16
MBD1-207ENST00000398488 TOPAZ1Q8N9V7 1692 aa22.27■■□□□ 1.16
MBD1-207ENST00000398488 CCDC61Q9Y6R9 512 aa22.26■■□□□ 1.15
MBD1-207ENST00000398488 NPHP3Q7Z494 1330 aa22.25■■□□□ 1.15
MBD1-207ENST00000398488 KRT28Q7Z3Y7 464 aa22.24■■□□□ 1.15
MBD1-207ENST00000398488 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
MBD1-207ENST00000398488 PLEKHG3A1L390 1219 aa22.22■■□□□ 1.15
MBD1-207ENST00000398488 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
MBD1-207ENST00000398488 CABP1Q9NZU7 370 aa22.22■■□□□ 1.15
MBD1-207ENST00000398488 JCADQ9P266 1359 aa22.22■■□□□ 1.15
MBD1-207ENST00000398488 PPIP5K1Q6PFW1 1433 aa22.22■■□□□ 1.15
MBD1-207ENST00000398488 ITSN1Q15811 1721 aa22.22■■□□□ 1.15
MBD1-207ENST00000398488 LRRC59Q96AG4 307 aaKnown RBP22.21■■□□□ 1.15
MBD1-207ENST00000398488 ACEP12821 1306 aa22.21■■□□□ 1.15
MBD1-207ENST00000398488 PSME1Q06323 249 aa22.2■■□□□ 1.14
MBD1-207ENST00000398488 NGDNQ8NEJ9 315 aaKnown RBP22.2■■□□□ 1.14
MBD1-207ENST00000398488 PNPLA6Q8IY17 1366 aa22.2■■□□□ 1.14
MBD1-207ENST00000398488 POLR3AO14802 1390 aaPredicted RBP22.19■■□□□ 1.14
MBD1-207ENST00000398488 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
MBD1-207ENST00000398488 EIF4G2P78344 907 aaKnown RBP eCLIP22.17■■□□□ 1.14
MBD1-207ENST00000398488 SPATA31A3Q5VYP0 1347 aa22.17■■□□□ 1.14
MBD1-207ENST00000398488 TRPM3Q9HCF6 1732 aaPredicted RBP22.17■■□□□ 1.14
MBD1-207ENST00000398488 LRP6O75581 1613 aa22.15■■□□□ 1.14
MBD1-207ENST00000398488 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.14
MBD1-207ENST00000398488 SLC12A5Q9H2X9 1139 aa22.14■■□□□ 1.13
MBD1-207ENST00000398488 MED1Q15648 1581 aaPredicted RBP22.14■■□□□ 1.13
MBD1-207ENST00000398488 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
MBD1-207ENST00000398488 TMF1P82094 1093 aa22.13■■□□□ 1.13
MBD1-207ENST00000398488 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
MBD1-207ENST00000398488 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
MBD1-207ENST00000398488 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
MBD1-207ENST00000398488 CD163L1Q9NR16 1453 aa22.12■■□□□ 1.13
MBD1-207ENST00000398488 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
MBD1-207ENST00000398488 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
MBD1-207ENST00000398488 PUS7Q96PZ0 661 aaKnown RBP22.11■■□□□ 1.13
MBD1-207ENST00000398488 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
MBD1-207ENST00000398488 COL22A1Q8NFW1 1626 aaPredicted RBP22.1■■□□□ 1.13
MBD1-207ENST00000398488 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
MBD1-207ENST00000398488 PLEKHG5O94827 1062 aa22.1■■□□□ 1.13
MBD1-207ENST00000398488 ALS2Q96Q42 1657 aa22.1■■□□□ 1.13
MBD1-207ENST00000398488 CPSF1Q10570 1443 aaKnown RBP22.09■■□□□ 1.13
MBD1-207ENST00000398488 PAK3O75914 559 aaPredicted RBP22.09■■□□□ 1.13
MBD1-207ENST00000398488 LMOD2Q6P5Q4 547 aa22.09■■□□□ 1.13
MBD1-207ENST00000398488 CABLES1Q8TDN4 633 aa22.09■■□□□ 1.13
MBD1-207ENST00000398488 USP6P35125 1406 aa22.08■■□□□ 1.12
MBD1-207ENST00000398488 SSH2Q76I76 1423 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms