RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 NLRP2Q9NX02 1062 aa10.61□□□□□ -0.71
PTPRD-204ENST00000397606 KDM6BO15054 1643 aa10.61□□□□□ -0.71
PTPRD-204ENST00000397606 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-204ENST00000397606 E9PSI1 815 aa10.6□□□□□ -0.71
PTPRD-204ENST00000397606 HSPA2P54652 639 aa10.6□□□□□ -0.71
PTPRD-204ENST00000397606 ZBED9Q6R2W3 1325 aa10.6□□□□□ -0.71
PTPRD-204ENST00000397606 TMEM2Q9UHN6 1383 aa10.6□□□□□ -0.71
PTPRD-204ENST00000397606 KCNH5Q8NCM2 988 aa10.6□□□□□ -0.71
PTPRD-204ENST00000397606 NPHP1O15259 732 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 RIPK4P57078 832 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
PTPRD-204ENST00000397606 PUS7Q96PZ0 661 aaKnown RBP10.59□□□□□ -0.71
PTPRD-204ENST00000397606 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 CDC42BPBQ9Y5S2 1711 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 SMG6Q86US8 1419 aaKnown RBP10.59□□□□□ -0.71
PTPRD-204ENST00000397606 LRPPRCP42704 1394 aaKnown RBP10.59□□□□□ -0.71
PTPRD-204ENST00000397606 HMOX1P09601 288 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 MSH6P52701 1360 aa10.59□□□□□ -0.71
PTPRD-204ENST00000397606 SMC4Q9NTJ3 1288 aa10.58□□□□□ -0.72
PTPRD-204ENST00000397606 DISP3Q9P2K9 1392 aa10.58□□□□□ -0.72
PTPRD-204ENST00000397606 FOXO3O43524 673 aa10.58□□□□□ -0.72
PTPRD-204ENST00000397606 XPCQ01831 940 aaPredicted RBP10.57□□□□□ -0.72
PTPRD-204ENST00000397606 ADAMTS8Q9UP79 889 aa10.57□□□□□ -0.72
PTPRD-204ENST00000397606 YTHDC2Q9H6S0 1430 aaKnown RBP10.57□□□□□ -0.72
PTPRD-204ENST00000397606 ANP32AP39687 249 aaKnown RBP10.57□□□□□ -0.72
PTPRD-204ENST00000397606 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
PTPRD-204ENST00000397606 PRDM11Q9NQV5 511 aa10.56□□□□□ -0.72
PTPRD-204ENST00000397606 GLI2P10070 1586 aa10.56□□□□□ -0.72
PTPRD-204ENST00000397606 NSD2O96028 1365 aa10.56□□□□□ -0.72
PTPRD-204ENST00000397606 KCNA6P17658 529 aa10.56□□□□□ -0.72
PTPRD-204ENST00000397606 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
PTPRD-204ENST00000397606 ARHGAP31Q2M1Z3 1444 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 C19orf44Q9H6X5 657 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 PTPRTO14522 1441 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 ABCC3O15438 1527 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 TRPM2O94759 1503 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 TTC5Q8N0Z6 440 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 ACEP12821 1306 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 HDAC5Q9UQL6 1122 aa10.55□□□□□ -0.72
PTPRD-204ENST00000397606 ZNF330Q9Y3S2 320 aaPredicted RBP10.55□□□□□ -0.72
PTPRD-204ENST00000397606 LRRIQ1Q96JM4 1722 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 ERVK-7P63135 1459 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 GNAI1P63096 354 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 PLEKHO1Q53GL0 409 aaPredicted RBP10.54□□□□□ -0.72
PTPRD-204ENST00000397606 NME9Q86XW9 330 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 TESK2Q96S53 571 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 NLRP1Q9C000 1473 aa10.54□□□□□ -0.72
PTPRD-204ENST00000397606 CFAP65Q6ZU64 1925 aaKnown RBP10.54□□□□□ -0.72
PTPRD-204ENST00000397606 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
PTPRD-204ENST00000397606 KRT28Q7Z3Y7 464 aa10.53□□□□□ -0.72
PTPRD-204ENST00000397606 TCP11L2Q8N4U5 519 aa10.53□□□□□ -0.72
PTPRD-204ENST00000397606 EFCAB6Q5THR3 1501 aa10.53□□□□□ -0.72
PTPRD-204ENST00000397606 OS9Q13438 667 aaPredicted RBP10.53□□□□□ -0.72
PTPRD-204ENST00000397606 SULT6B1Q6IMI4 303 aa10.52□□□□□ -0.72
PTPRD-204ENST00000397606 PNISRQ8TF01 805 aaKnown RBP10.52□□□□□ -0.72
PTPRD-204ENST00000397606 STRN4Q9NRL3 753 aa10.52□□□□□ -0.72
PTPRD-204ENST00000397606 ANKRD36BQ8N2N9 1353 aa10.52□□□□□ -0.72
PTPRD-204ENST00000397606 LTKP29376 864 aa10.52□□□□□ -0.73
PTPRD-204ENST00000397606 TET3O43151 1660 aa10.52□□□□□ -0.73
PTPRD-204ENST00000397606 TATP17735 454 aaPredicted RBP10.52□□□□□ -0.73
PTPRD-204ENST00000397606 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
PTPRD-204ENST00000397606 DIP2BQ9P265 1576 aa10.52□□□□□ -0.73
PTPRD-204ENST00000397606 NPHP3Q7Z494 1330 aa10.52□□□□□ -0.73
PTPRD-204ENST00000397606 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.73
PTPRD-204ENST00000397606 TOM1O60784 492 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 ZC3H6P61129 1189 aaKnown RBP10.51□□□□□ -0.73
PTPRD-204ENST00000397606 TOM1L2Q6ZVM7 507 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-204ENST00000397606 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-204ENST00000397606 ELL2O00472 640 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-204ENST00000397606 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-204ENST00000397606 PRDM15P57071 1507 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-204ENST00000397606 IQGAP3Q86VI3 1631 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 PPIP5K1Q6PFW1 1433 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 SPATA31E1Q6ZUB1 1445 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 CROCC2H7BZ55 1655 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
PTPRD-204ENST00000397606 FCHSD2O94868 740 aa10.5□□□□□ -0.73
PTPRD-204ENST00000397606 USP35Q9P2H5 1018 aa10.5□□□□□ -0.73
PTPRD-204ENST00000397606 ABCC11Q96J66 1382 aa10.5□□□□□ -0.73
PTPRD-204ENST00000397606 UGGT1Q9NYU2 1555 aa10.5□□□□□ -0.73
PTPRD-204ENST00000397606 EIF5BO60841 1220 aaKnown RBP10.5□□□□□ -0.73
PTPRD-204ENST00000397606 TSPYL4Q9UJ04 414 aa10.5□□□□□ -0.73
PTPRD-204ENST00000397606 PLEKHG1Q9ULL1 1385 aa10.49□□□□□ -0.73
PTPRD-204ENST00000397606 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
PTPRD-204ENST00000397606 UNC13BO14795 1591 aa10.49□□□□□ -0.73
PTPRD-204ENST00000397606 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 CLUAP1Q96AJ1 413 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 MYOM2P54296 1465 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 ZKSCAN2Q63HK3 967 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 PLA2R1Q13018 1463 aa10.48□□□□□ -0.73
PTPRD-204ENST00000397606 B4GALNT3Q6L9W6 998 aa10.47□□□□□ -0.73
PTPRD-204ENST00000397606 RWDD1Q9H446 243 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-204ENST00000397606 INO80Q9ULG1 1556 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms