RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 RGL3Q3MIN7 710 aa17.89■□□□□ 0.45
SYNE4-203ENST00000397428 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
SYNE4-203ENST00000397428 USP21Q9UK80 565 aa17.89■□□□□ 0.45
SYNE4-203ENST00000397428 SPATA31E1Q6ZUB1 1445 aa17.89■□□□□ 0.45
SYNE4-203ENST00000397428 WAPLQ7Z5K2 1190 aa17.88■□□□□ 0.45
SYNE4-203ENST00000397428 RGS12O14924 1447 aa17.88■□□□□ 0.45
SYNE4-203ENST00000397428 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
SYNE4-203ENST00000397428 NPHP3Q7Z494 1330 aa17.87■□□□□ 0.45
SYNE4-203ENST00000397428 ABCC11Q96J66 1382 aa17.87■□□□□ 0.45
SYNE4-203ENST00000397428 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
SYNE4-203ENST00000397428 FOXO3O43524 673 aa17.86■□□□□ 0.45
SYNE4-203ENST00000397428 SIRT1Q96EB6 747 aa17.86■□□□□ 0.45
SYNE4-203ENST00000397428 STK26Q9P289 416 aa17.86■□□□□ 0.45
SYNE4-203ENST00000397428 LRPPRCP42704 1394 aaKnown RBP17.86■□□□□ 0.45
SYNE4-203ENST00000397428 TECPR2O15040 1411 aa17.86■□□□□ 0.45
SYNE4-203ENST00000397428 COL22A1Q8NFW1 1626 aaPredicted RBP17.86■□□□□ 0.45
SYNE4-203ENST00000397428 CCDC144AA2RUR9 1427 aa17.85■□□□□ 0.45
SYNE4-203ENST00000397428 TMEM132EQ6IEE7 984 aa17.85■□□□□ 0.45
SYNE4-203ENST00000397428 CDC42BPGQ6DT37 1551 aa17.84■□□□□ 0.45
SYNE4-203ENST00000397428 PXDNQ92626 1479 aa17.84■□□□□ 0.45
SYNE4-203ENST00000397428 MYOM2P54296 1465 aa17.82■□□□□ 0.44
SYNE4-203ENST00000397428 ATRNO75882 1429 aa17.81■□□□□ 0.44
SYNE4-203ENST00000397428 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
SYNE4-203ENST00000397428 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
SYNE4-203ENST00000397428 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
SYNE4-203ENST00000397428 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
SYNE4-203ENST00000397428 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
SYNE4-203ENST00000397428 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
SYNE4-203ENST00000397428 NUTM2FA1L443 756 aa17.79■□□□□ 0.44
SYNE4-203ENST00000397428 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
SYNE4-203ENST00000397428 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
SYNE4-203ENST00000397428 YTHDC2Q9H6S0 1430 aaKnown RBP17.78■□□□□ 0.44
SYNE4-203ENST00000397428 SPATA31A3Q5VYP0 1347 aa17.77■□□□□ 0.44
SYNE4-203ENST00000397428 GJD4Q96KN9 370 aaPredicted RBP17.77■□□□□ 0.44
SYNE4-203ENST00000397428 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
SYNE4-203ENST00000397428 KNDC1Q76NI1 1749 aa17.75■□□□□ 0.43
SYNE4-203ENST00000397428 MARF1Q9Y4F3 1742 aaKnown RBP17.75■□□□□ 0.43
SYNE4-203ENST00000397428 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
SYNE4-203ENST00000397428 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
SYNE4-203ENST00000397428 FMN2Q9NZ56 1722 aa17.74■□□□□ 0.43
SYNE4-203ENST00000397428 UNC5CLQ8IV45 518 aa17.73■□□□□ 0.43
SYNE4-203ENST00000397428 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
SYNE4-203ENST00000397428 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
SYNE4-203ENST00000397428 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
SYNE4-203ENST00000397428 PSME1Q06323 249 aa17.71■□□□□ 0.43
SYNE4-203ENST00000397428 SLIT2O94813 1529 aa17.7■□□□□ 0.42
SYNE4-203ENST00000397428 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
SYNE4-203ENST00000397428 PRAM1Q96QH2 718 aa17.69■□□□□ 0.42
SYNE4-203ENST00000397428 RGPD8O14715 1765 aaPredicted RBP17.68■□□□□ 0.42
SYNE4-203ENST00000397428 ONECUT3O60422 494 aaPredicted RBP17.68■□□□□ 0.42
SYNE4-203ENST00000397428 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
SYNE4-203ENST00000397428 EP400Q96L91 3159 aa17.67■□□□□ 0.42
SYNE4-203ENST00000397428 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
SYNE4-203ENST00000397428 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
SYNE4-203ENST00000397428 ZRANB1Q9UGI0 708 aa17.66■□□□□ 0.42
SYNE4-203ENST00000397428 RALGAPBQ86X10 1494 aa17.65■□□□□ 0.42
SYNE4-203ENST00000397428 TNS3Q68CZ2 1445 aa17.64■□□□□ 0.42
SYNE4-203ENST00000397428 SAFB2Q14151 953 aaKnown RBP eCLIP17.64■□□□□ 0.41
SYNE4-203ENST00000397428 VPS72Q15906 364 aa17.64■□□□□ 0.41
SYNE4-203ENST00000397428 POGKQ9P215 609 aa17.64■□□□□ 0.41
SYNE4-203ENST00000397428 GLI3P10071 1580 aa17.64■□□□□ 0.41
SYNE4-203ENST00000397428 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
SYNE4-203ENST00000397428 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
SYNE4-203ENST00000397428 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
SYNE4-203ENST00000397428 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
SYNE4-203ENST00000397428 SEPT12Q8IYM1 358 aa17.61■□□□□ 0.41
SYNE4-203ENST00000397428 PMFBP1Q8TBY8 1022 aa17.61■□□□□ 0.41
SYNE4-203ENST00000397428 STAC3Q96MF2 364 aa17.61■□□□□ 0.41
SYNE4-203ENST00000397428 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
SYNE4-203ENST00000397428 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
SYNE4-203ENST00000397428 ANKARQ7Z5J8 1434 aa17.61■□□□□ 0.41
SYNE4-203ENST00000397428 SRCAPQ6ZRS2 3230 aa17.59■□□□□ 0.41
SYNE4-203ENST00000397428 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
SYNE4-203ENST00000397428 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-203ENST00000397428 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
SYNE4-203ENST00000397428 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
SYNE4-203ENST00000397428 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
SYNE4-203ENST00000397428 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.4
SYNE4-203ENST00000397428 PRR36Q9H6K5 1346 aa17.57■□□□□ 0.4
SYNE4-203ENST00000397428 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
SYNE4-203ENST00000397428 HRCP23327 699 aa17.57■□□□□ 0.4
SYNE4-203ENST00000397428 DCAF11Q8TEB1 546 aa17.57■□□□□ 0.4
SYNE4-203ENST00000397428 NWD2Q9ULI1 1742 aa17.57■□□□□ 0.4
SYNE4-203ENST00000397428 WASLO00401 505 aaPredicted RBP17.56■□□□□ 0.4
SYNE4-203ENST00000397428 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
SYNE4-203ENST00000397428 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
SYNE4-203ENST00000397428 MINK1Q8N4C8 1332 aaPredicted RBP17.55■□□□□ 0.4
SYNE4-203ENST00000397428 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
SYNE4-203ENST00000397428 CCDC9Q9Y3X0 531 aaKnown RBP17.55■□□□□ 0.4
SYNE4-203ENST00000397428 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
SYNE4-203ENST00000397428 PLCH1Q4KWH8 1693 aa17.54■□□□□ 0.4
SYNE4-203ENST00000397428 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
SYNE4-203ENST00000397428 ABCA3Q99758 1704 aa17.53■□□□□ 0.4
SYNE4-203ENST00000397428 TRPM3Q9HCF6 1732 aaPredicted RBP17.53■□□□□ 0.4
SYNE4-203ENST00000397428 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
SYNE4-203ENST00000397428 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
SYNE4-203ENST00000397428 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
SYNE4-203ENST00000397428 ALS2Q96Q42 1657 aa17.51■□□□□ 0.39
SYNE4-203ENST00000397428 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
SYNE4-203ENST00000397428 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms