RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.36
APTX-207ENST00000397172 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
APTX-207ENST00000397172 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
APTX-207ENST00000397172 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
APTX-207ENST00000397172 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
APTX-207ENST00000397172 ISY1Q9ULR0 285 aaKnown RBP12.76□□□□□ -0.37
APTX-207ENST00000397172 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
APTX-207ENST00000397172 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
APTX-207ENST00000397172 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
APTX-207ENST00000397172 CCDC144AA2RUR9 1427 aa12.75□□□□□ -0.37
APTX-207ENST00000397172 GOLGA6L3A6NEY3 463 aa12.75□□□□□ -0.37
APTX-207ENST00000397172 RRAGDQ9NQL2 400 aaPredicted RBP12.75□□□□□ -0.37
APTX-207ENST00000397172 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
APTX-207ENST00000397172 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
APTX-207ENST00000397172 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
APTX-207ENST00000397172 ADGRB3O60242 1522 aa12.74□□□□□ -0.37
APTX-207ENST00000397172 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
APTX-207ENST00000397172 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
APTX-207ENST00000397172 UBR1Q8IWV7 1749 aa12.73□□□□□ -0.37
APTX-207ENST00000397172 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
APTX-207ENST00000397172 RALBP1Q15311 655 aa12.73□□□□□ -0.37
APTX-207ENST00000397172 INSRP06213 1382 aa12.73□□□□□ -0.37
APTX-207ENST00000397172 TMEM131LA2VDJ0 1609 aa12.72□□□□□ -0.37
APTX-207ENST00000397172 NEURL4Q96JN8 1562 aa12.72□□□□□ -0.37
APTX-207ENST00000397172 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
APTX-207ENST00000397172 SLIT1O75093 1534 aa12.71□□□□□ -0.37
APTX-207ENST00000397172 ARHGAP23Q9P227 1491 aa12.71□□□□□ -0.38
APTX-207ENST00000397172 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.38
APTX-207ENST00000397172 HDGFP51858 240 aaKnown RBP12.71□□□□□ -0.38
APTX-207ENST00000397172 HSPA2P54652 639 aa12.71□□□□□ -0.38
APTX-207ENST00000397172 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
APTX-207ENST00000397172 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
APTX-207ENST00000397172 KIF1BO60333 1816 aa12.7□□□□□ -0.38
APTX-207ENST00000397172 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
APTX-207ENST00000397172 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
APTX-207ENST00000397172 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
APTX-207ENST00000397172 RPGRIP1LQ68CZ1 1315 aa12.69□□□□□ -0.38
APTX-207ENST00000397172 MYBBP1AQ9BQG0 1328 aaKnown RBP12.69□□□□□ -0.38
APTX-207ENST00000397172 MRE11P49959 708 aa12.68□□□□□ -0.38
APTX-207ENST00000397172 EID1Q9Y6B2 187 aa12.68□□□□□ -0.38
APTX-207ENST00000397172 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.68□□□□□ -0.38
APTX-207ENST00000397172 L3MBTL2Q969R5 705 aa12.68□□□□□ -0.38
APTX-207ENST00000397172 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
APTX-207ENST00000397172 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
APTX-207ENST00000397172 ZNF326Q5BKZ1 582 aaKnown RBP12.66□□□□□ -0.38
APTX-207ENST00000397172 MTERF4Q7Z6M4 381 aaKnown RBP12.66□□□□□ -0.38
APTX-207ENST00000397172 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
APTX-207ENST00000397172 MED14O60244 1454 aa12.66□□□□□ -0.38
APTX-207ENST00000397172 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
APTX-207ENST00000397172 MYO5BQ9ULV0 1848 aa12.66□□□□□ -0.38
APTX-207ENST00000397172 SLC4A3P48751 1232 aa12.65□□□□□ -0.38
APTX-207ENST00000397172 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.38
APTX-207ENST00000397172 TERF1P54274 439 aa12.65□□□□□ -0.38
APTX-207ENST00000397172 STRCQ7RTU9 1775 aa12.64□□□□□ -0.39
APTX-207ENST00000397172 LTKP29376 864 aa12.64□□□□□ -0.39
APTX-207ENST00000397172 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
APTX-207ENST00000397172 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
APTX-207ENST00000397172 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
APTX-207ENST00000397172 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
APTX-207ENST00000397172 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
APTX-207ENST00000397172 PTMSP20962 102 aa12.63□□□□□ -0.39
APTX-207ENST00000397172 POGKQ9P215 609 aa12.63□□□□□ -0.39
APTX-207ENST00000397172 KDM2BQ8NHM5 1336 aa12.63□□□□□ -0.39
APTX-207ENST00000397172 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
APTX-207ENST00000397172 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 C8orf34Q49A92 452 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
APTX-207ENST00000397172 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
APTX-207ENST00000397172 PLEKHG1Q9ULL1 1385 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 ESPNB1AK53 854 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
APTX-207ENST00000397172 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
APTX-207ENST00000397172 PPLO60437 1756 aa12.6□□□□□ -0.39
APTX-207ENST00000397172 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
APTX-207ENST00000397172 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
APTX-207ENST00000397172 MYOM2P54296 1465 aa12.59□□□□□ -0.39
APTX-207ENST00000397172 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
APTX-207ENST00000397172 IFT172Q9UG01 1749 aa12.58□□□□□ -0.4
APTX-207ENST00000397172 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
APTX-207ENST00000397172 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
APTX-207ENST00000397172 RBM10P98175 930 aaKnown RBP12.57□□□□□ -0.4
APTX-207ENST00000397172 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
APTX-207ENST00000397172 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
APTX-207ENST00000397172 USP47Q96K76 1375 aa12.57□□□□□ -0.4
APTX-207ENST00000397172 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
APTX-207ENST00000397172 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
APTX-207ENST00000397172 SETBP1Q9Y6X0 1596 aa12.57□□□□□ -0.4
APTX-207ENST00000397172 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
APTX-207ENST00000397172 VIRMAQ69YN4 1812 aaKnown RBP12.56□□□□□ -0.4
APTX-207ENST00000397172 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
APTX-207ENST00000397172 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
APTX-207ENST00000397172 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
APTX-207ENST00000397172 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
APTX-207ENST00000397172 TNNT2P45379 298 aaPredicted RBP12.54□□□□□ -0.4
APTX-207ENST00000397172 AAMPQ13685 434 aa12.54□□□□□ -0.4
APTX-207ENST00000397172 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
APTX-207ENST00000397172 FGD1P98174 961 aa12.54□□□□□ -0.4
APTX-207ENST00000397172 GRPEL1Q9HAV7 217 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms