RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
PDXDC1-202ENST00000396410 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
PDXDC1-202ENST00000396410 NBR1Q14596 966 aa14.97□□□□□ -0.01
PDXDC1-202ENST00000396410 RGS3P49796 1198 aa14.97□□□□□ -0.01
PDXDC1-202ENST00000396410 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
PDXDC1-202ENST00000396410 PDE4AP27815 886 aa14.96□□□□□ -0.01
PDXDC1-202ENST00000396410 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
PDXDC1-202ENST00000396410 ABCC3O15438 1527 aa14.96□□□□□ -0.01
PDXDC1-202ENST00000396410 MROH1Q8NDA8 1641 aa14.96□□□□□ -0.01
PDXDC1-202ENST00000396410 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.02
PDXDC1-202ENST00000396410 TCP11L2Q8N4U5 519 aa14.95□□□□□ -0.02
PDXDC1-202ENST00000396410 IPO9Q96P70 1041 aaKnown RBP14.95□□□□□ -0.02
PDXDC1-202ENST00000396410 CENPQQ7L2Z9 268 aaPredicted RBP14.95□□□□□ -0.02
PDXDC1-202ENST00000396410 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
PDXDC1-202ENST00000396410 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
PDXDC1-202ENST00000396410 KIAA1210Q9ULL0 1709 aa14.94□□□□□ -0.02
PDXDC1-202ENST00000396410 BCAR3O75815 825 aa14.94□□□□□ -0.02
PDXDC1-202ENST00000396410 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
PDXDC1-202ENST00000396410 MS4A1P11836 297 aa14.93□□□□□ -0.02
PDXDC1-202ENST00000396410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDXDC1-202ENST00000396410 WWC1Q8IX03 1113 aa14.93□□□□□ -0.02
PDXDC1-202ENST00000396410 HDGFP51858 240 aaKnown RBP14.92□□□□□ -0.02
PDXDC1-202ENST00000396410 POLR3AO14802 1390 aaPredicted RBP14.92□□□□□ -0.02
PDXDC1-202ENST00000396410 NEURL4Q96JN8 1562 aa14.91□□□□□ -0.02
PDXDC1-202ENST00000396410 NKTRP30414 1462 aaKnown RBP14.91□□□□□ -0.02
PDXDC1-202ENST00000396410 PNNQ9H307 717 aaKnown RBP14.91□□□□□ -0.02
PDXDC1-202ENST00000396410 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
PDXDC1-202ENST00000396410 MROH2AA6NES4 1674 aa14.9□□□□□ -0.02
PDXDC1-202ENST00000396410 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
PDXDC1-202ENST00000396410 BCL2L13Q9BXK5 485 aa14.9□□□□□ -0.02
PDXDC1-202ENST00000396410 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
PDXDC1-202ENST00000396410 ATAD2Q6PL18 1390 aa14.89□□□□□ -0.03
PDXDC1-202ENST00000396410 COG6Q9Y2V7 657 aa14.89□□□□□ -0.03
PDXDC1-202ENST00000396410 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
PDXDC1-202ENST00000396410 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
PDXDC1-202ENST00000396410 DDRGK1Q96HY6 314 aa14.88□□□□□ -0.03
PDXDC1-202ENST00000396410 PUS7Q96PZ0 661 aaKnown RBP14.88□□□□□ -0.03
PDXDC1-202ENST00000396410 CABP1Q9NZU7 370 aa14.88□□□□□ -0.03
PDXDC1-202ENST00000396410 LAS1LQ9Y4W2 734 aaKnown RBP14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 NRXN1Q9ULB1 1477 aa14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 SETBP1Q9Y6X0 1596 aa14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 SKAP1Q86WV1 359 aa14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 NSD2O96028 1365 aa14.87□□□□□ -0.03
PDXDC1-202ENST00000396410 DIAPH1O60610 1272 aaKnown RBP14.86□□□□□ -0.03
PDXDC1-202ENST00000396410 PANK1Q8TE04 598 aa14.86□□□□□ -0.03
PDXDC1-202ENST00000396410 ZNF521Q96K83 1311 aa14.86□□□□□ -0.03
PDXDC1-202ENST00000396410 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
PDXDC1-202ENST00000396410 WDR63Q8IWG1 891 aa14.85□□□□□ -0.03
PDXDC1-202ENST00000396410 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.85□□□□□ -0.03
PDXDC1-202ENST00000396410 BACH2Q9BYV9 841 aa14.85□□□□□ -0.03
PDXDC1-202ENST00000396410 WAPLQ7Z5K2 1190 aa14.85□□□□□ -0.03
PDXDC1-202ENST00000396410 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
PDXDC1-202ENST00000396410 NINLQ9Y2I6 1382 aa14.84□□□□□ -0.03
PDXDC1-202ENST00000396410 ARHGAP31Q2M1Z3 1444 aa14.84□□□□□ -0.03
PDXDC1-202ENST00000396410 QRICH2Q9H0J4 1663 aa14.84□□□□□ -0.03
PDXDC1-202ENST00000396410 PDE3AQ14432 1141 aa14.83□□□□□ -0.04
PDXDC1-202ENST00000396410 SMC4Q9NTJ3 1288 aa14.83□□□□□ -0.04
PDXDC1-202ENST00000396410 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
PDXDC1-202ENST00000396410 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
PDXDC1-202ENST00000396410 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
PDXDC1-202ENST00000396410 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
PDXDC1-202ENST00000396410 RIPK4P57078 832 aa14.82□□□□□ -0.04
PDXDC1-202ENST00000396410 GLI2P10070 1586 aa14.82□□□□□ -0.04
PDXDC1-202ENST00000396410 MYOM1P52179 1685 aa14.82□□□□□ -0.04
PDXDC1-202ENST00000396410 FAM161AQ3B820 660 aa14.81□□□□□ -0.04
PDXDC1-202ENST00000396410 TXNDC2Q86VQ3 553 aa14.81□□□□□ -0.04
PDXDC1-202ENST00000396410 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
PDXDC1-202ENST00000396410 PPLO60437 1756 aa14.81□□□□□ -0.04
PDXDC1-202ENST00000396410 FYB1O15117 783 aa14.8□□□□□ -0.04
PDXDC1-202ENST00000396410 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
PDXDC1-202ENST00000396410 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
PDXDC1-202ENST00000396410 ZKSCAN2Q63HK3 967 aa14.79□□□□□ -0.04
PDXDC1-202ENST00000396410 TSR2Q969E8 191 aaKnown RBP14.79□□□□□ -0.04
PDXDC1-202ENST00000396410 ADGRB1O14514 1584 aa14.79□□□□□ -0.04
PDXDC1-202ENST00000396410 TSPOAP1O95153 1857 aa14.79□□□□□ -0.04
PDXDC1-202ENST00000396410 RARSP54136 660 aaKnown RBP14.79□□□□□ -0.04
PDXDC1-202ENST00000396410 RWDD1Q9H446 243 aaPredicted RBP14.78□□□□□ -0.04
PDXDC1-202ENST00000396410 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
PDXDC1-202ENST00000396410 NEXMIFQ5QGS0 1516 aa14.78□□□□□ -0.04
PDXDC1-202ENST00000396410 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
PDXDC1-202ENST00000396410 ITPRIPQ8IWB1 547 aa14.78□□□□□ -0.04
PDXDC1-202ENST00000396410 COG3Q96JB2 828 aa14.78□□□□□ -0.04
PDXDC1-202ENST00000396410 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.04
PDXDC1-202ENST00000396410 TMPOP42166 694 aaKnown RBP14.77□□□□□ -0.04
PDXDC1-202ENST00000396410 ZFYVE9O95405 1425 aa14.77□□□□□ -0.05
PDXDC1-202ENST00000396410 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
PDXDC1-202ENST00000396410 HMOX1P09601 288 aa14.76□□□□□ -0.05
PDXDC1-202ENST00000396410 MYO3AQ8NEV4 1616 aa14.76□□□□□ -0.05
PDXDC1-202ENST00000396410 SOX12O15370 315 aa14.76□□□□□ -0.05
PDXDC1-202ENST00000396410 IPO8O15397 1037 aaKnown RBP14.75□□□□□ -0.05
PDXDC1-202ENST00000396410 CCDC27Q2M243 656 aa14.75□□□□□ -0.05
PDXDC1-202ENST00000396410 DZIP1LQ8IYY4 767 aaKnown RBP14.75□□□□□ -0.05
PDXDC1-202ENST00000396410 ABCC11Q96J66 1382 aa14.75□□□□□ -0.05
PDXDC1-202ENST00000396410 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
PDXDC1-202ENST00000396410 ZC3H13Q5T200 1668 aaKnown RBP14.75□□□□□ -0.05
PDXDC1-202ENST00000396410 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
PDXDC1-202ENST00000396410 TULP4Q9NRJ4 1543 aa14.74□□□□□ -0.05
PDXDC1-202ENST00000396410 CALD1Q05682 793 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms