RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
PSMA1-201ENST00000396394 WAPLQ7Z5K2 1190 aa18.36■□□□□ 0.53
PSMA1-201ENST00000396394 LAMC1P11047 1609 aa18.35■□□□□ 0.53
PSMA1-201ENST00000396394 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
PSMA1-201ENST00000396394 KDM2AQ9Y2K7 1162 aa18.35■□□□□ 0.53
PSMA1-201ENST00000396394 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
PSMA1-201ENST00000396394 KNDC1Q76NI1 1749 aa18.33■□□□□ 0.52
PSMA1-201ENST00000396394 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
PSMA1-201ENST00000396394 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
PSMA1-201ENST00000396394 CDC42BPGQ6DT37 1551 aa18.31■□□□□ 0.52
PSMA1-201ENST00000396394 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
PSMA1-201ENST00000396394 SOCS7O14512 581 aa18.29■□□□□ 0.52
PSMA1-201ENST00000396394 RGS17Q9UGC6 210 aaPredicted RBP18.28■□□□□ 0.52
PSMA1-201ENST00000396394 NHSL1Q5SYE7 1610 aa18.28■□□□□ 0.52
PSMA1-201ENST00000396394 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
PSMA1-201ENST00000396394 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
PSMA1-201ENST00000396394 ADGRB1O14514 1584 aa18.27■□□□□ 0.52
PSMA1-201ENST00000396394 DLC1Q96QB1 1528 aa18.27■□□□□ 0.52
PSMA1-201ENST00000396394 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.51
PSMA1-201ENST00000396394 PRAM1Q96QH2 718 aa18.27■□□□□ 0.51
PSMA1-201ENST00000396394 SOS2Q07890 1332 aaPredicted RBP18.26■□□□□ 0.51
PSMA1-201ENST00000396394 POGKQ9P215 609 aa18.26■□□□□ 0.51
PSMA1-201ENST00000396394 SHPRHQ149N8 1683 aa18.25■□□□□ 0.51
PSMA1-201ENST00000396394 TRAK1Q9UPV9 953 aa18.24■□□□□ 0.51
PSMA1-201ENST00000396394 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
PSMA1-201ENST00000396394 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
PSMA1-201ENST00000396394 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
PSMA1-201ENST00000396394 MEX3CQ5U5Q3 659 aaKnown RBP18.22■□□□□ 0.51
PSMA1-201ENST00000396394 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
PSMA1-201ENST00000396394 LRP6O75581 1613 aa18.2■□□□□ 0.5
PSMA1-201ENST00000396394 FOXO3O43524 673 aa18.2■□□□□ 0.5
PSMA1-201ENST00000396394 FMN2Q9NZ56 1722 aa18.19■□□□□ 0.5
PSMA1-201ENST00000396394 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
PSMA1-201ENST00000396394 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
PSMA1-201ENST00000396394 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
PSMA1-201ENST00000396394 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
PSMA1-201ENST00000396394 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
PSMA1-201ENST00000396394 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
PSMA1-201ENST00000396394 ZNF772Q68DY9 489 aaPredicted RBP18.17■□□□□ 0.5
PSMA1-201ENST00000396394 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
PSMA1-201ENST00000396394 KIAA1210Q9ULL0 1709 aa18.16■□□□□ 0.5
PSMA1-201ENST00000396394 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
PSMA1-201ENST00000396394 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
PSMA1-201ENST00000396394 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
PSMA1-201ENST00000396394 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
PSMA1-201ENST00000396394 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
PSMA1-201ENST00000396394 PXDNQ92626 1479 aa18.15■□□□□ 0.5
PSMA1-201ENST00000396394 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.49
PSMA1-201ENST00000396394 NBPF1Q3BBV0 1214 aa18.14■□□□□ 0.49
PSMA1-201ENST00000396394 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
PSMA1-201ENST00000396394 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
PSMA1-201ENST00000396394 KRT28Q7Z3Y7 464 aa18.13■□□□□ 0.49
PSMA1-201ENST00000396394 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
PSMA1-201ENST00000396394 PSME1Q06323 249 aa18.12■□□□□ 0.49
PSMA1-201ENST00000396394 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
PSMA1-201ENST00000396394 C8orf37Q96NL8 207 aa18.09■□□□□ 0.49
PSMA1-201ENST00000396394 ARHGEF28Q8N1W1 1705 aaKnown RBP18.09■□□□□ 0.49
PSMA1-201ENST00000396394 COL22A1Q8NFW1 1626 aaPredicted RBP18.09■□□□□ 0.49
PSMA1-201ENST00000396394 AFF2P51816 1311 aa18.09■□□□□ 0.49
PSMA1-201ENST00000396394 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.49
PSMA1-201ENST00000396394 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
PSMA1-201ENST00000396394 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.48
PSMA1-201ENST00000396394 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
PSMA1-201ENST00000396394 SBNO1A3KN83 1393 aa18.07■□□□□ 0.48
PSMA1-201ENST00000396394 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
PSMA1-201ENST00000396394 PRR36Q9H6K5 1346 aa18.07■□□□□ 0.48
PSMA1-201ENST00000396394 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
PSMA1-201ENST00000396394 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
PSMA1-201ENST00000396394 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
PSMA1-201ENST00000396394 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
PSMA1-201ENST00000396394 RXRBP28702 533 aa18.04■□□□□ 0.48
PSMA1-201ENST00000396394 FNBP4Q8N3X1 1017 aaPredicted RBP18.04■□□□□ 0.48
PSMA1-201ENST00000396394 TNS3Q68CZ2 1445 aa18.04■□□□□ 0.48
PSMA1-201ENST00000396394 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
PSMA1-201ENST00000396394 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
PSMA1-201ENST00000396394 ARHGEF10O15013 1369 aa18.02■□□□□ 0.48
PSMA1-201ENST00000396394 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.47
PSMA1-201ENST00000396394 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.47
PSMA1-201ENST00000396394 ROCK2O75116 1388 aaKnown RBP18.02■□□□□ 0.47
PSMA1-201ENST00000396394 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
PSMA1-201ENST00000396394 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
PSMA1-201ENST00000396394 USP21Q9UK80 565 aa18.01■□□□□ 0.47
PSMA1-201ENST00000396394 ATP7BP35670 1465 aa18■□□□□ 0.47
PSMA1-201ENST00000396394 MIER1Q8N108 512 aa18■□□□□ 0.47
PSMA1-201ENST00000396394 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
PSMA1-201ENST00000396394 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
PSMA1-201ENST00000396394 NBPF8Q3BBV2 869 aa17.99■□□□□ 0.47
PSMA1-201ENST00000396394 PLEKHG3A1L390 1219 aa17.98■□□□□ 0.47
PSMA1-201ENST00000396394 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
PSMA1-201ENST00000396394 TRPC5Q9UL62 973 aaPredicted RBP17.98■□□□□ 0.47
PSMA1-201ENST00000396394 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
PSMA1-201ENST00000396394 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
PSMA1-201ENST00000396394 SRPK2P78362 688 aaKnown RBP17.97■□□□□ 0.47
PSMA1-201ENST00000396394 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.47
PSMA1-201ENST00000396394 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
PSMA1-201ENST00000396394 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
PSMA1-201ENST00000396394 BCL9LQ86UU0 1499 aa17.94■□□□□ 0.46
PSMA1-201ENST00000396394 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
PSMA1-201ENST00000396394 CABP2Q9NPB3 220 aa17.94■□□□□ 0.46
PSMA1-201ENST00000396394 ACEP12821 1306 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms