RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ABCC11Q96J66 1382 aa26.96■■□□□ 1.91
FXN-203ENST00000396366 MEX3CQ5U5Q3 659 aaKnown RBP26.95■■□□□ 1.9
FXN-203ENST00000396366 LRRC59Q96AG4 307 aaKnown RBP26.95■■□□□ 1.9
FXN-203ENST00000396366 TECPR2O15040 1411 aa26.95■■□□□ 1.9
FXN-203ENST00000396366 NRXN1Q9ULB1 1477 aa26.94■■□□□ 1.9
FXN-203ENST00000396366 YTHDC2Q9H6S0 1430 aaKnown RBP26.94■■□□□ 1.9
FXN-203ENST00000396366 MYOM2P54296 1465 aa26.92■■□□□ 1.9
FXN-203ENST00000396366 NUTM2FA1L443 756 aa26.91■■□□□ 1.9
FXN-203ENST00000396366 KNDC1Q76NI1 1749 aa26.9■■□□□ 1.9
FXN-203ENST00000396366 CDC42BPGQ6DT37 1551 aa26.89■■□□□ 1.9
FXN-203ENST00000396366 KDM2AQ9Y2K7 1162 aa26.89■■□□□ 1.9
FXN-203ENST00000396366 PNPLA6Q8IY17 1366 aa26.88■■□□□ 1.89
FXN-203ENST00000396366 ESCO1Q5FWF5 840 aa26.88■■□□□ 1.89
FXN-203ENST00000396366 LAMC1P11047 1609 aa26.87■■□□□ 1.89
FXN-203ENST00000396366 SOS2Q07890 1332 aaPredicted RBP26.87■■□□□ 1.89
FXN-203ENST00000396366 DCAF11Q8TEB1 546 aa26.86■■□□□ 1.89
FXN-203ENST00000396366 DHX57Q6P158 1386 aaKnown RBP26.85■■□□□ 1.89
FXN-203ENST00000396366 SIRT1Q96EB6 747 aa26.84■■□□□ 1.89
FXN-203ENST00000396366 SAFB2Q14151 953 aaKnown RBP eCLIP26.82■■□□□ 1.88
FXN-203ENST00000396366 FOXO3O43524 673 aa26.81■■□□□ 1.88
FXN-203ENST00000396366 XPCQ01831 940 aaPredicted RBP26.81■■□□□ 1.88
FXN-203ENST00000396366 ZNF772Q68DY9 489 aaPredicted RBP26.81■■□□□ 1.88
FXN-203ENST00000396366 PRAM1Q96QH2 718 aa26.81■■□□□ 1.88
FXN-203ENST00000396366 FMN2Q9NZ56 1722 aa26.79■■□□□ 1.88
FXN-203ENST00000396366 ADAMTS2O95450 1211 aa26.78■■□□□ 1.88
FXN-203ENST00000396366 C8orf37Q96NL8 207 aa26.78■■□□□ 1.88
FXN-203ENST00000396366 AFF2P51816 1311 aa26.78■■□□□ 1.88
FXN-203ENST00000396366 ADGRB1O14514 1584 aa26.77■■□□□ 1.88
FXN-203ENST00000396366 NPHP3Q7Z494 1330 aa26.76■■□□□ 1.87
FXN-203ENST00000396366 TRAK1Q9UPV9 953 aa26.76■■□□□ 1.87
FXN-203ENST00000396366 PXDNQ92626 1479 aa26.75■■□□□ 1.87
FXN-203ENST00000396366 RGPD8O14715 1765 aaPredicted RBP26.74■■□□□ 1.87
FXN-203ENST00000396366 POGKQ9P215 609 aa26.74■■□□□ 1.87
FXN-203ENST00000396366 DLC1Q96QB1 1528 aa26.72■■□□□ 1.87
FXN-203ENST00000396366 NGLY1Q96IV0 654 aa26.7■■□□□ 1.86
FXN-203ENST00000396366 RXRBP28702 533 aa26.69■■□□□ 1.86
FXN-203ENST00000396366 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
FXN-203ENST00000396366 COL22A1Q8NFW1 1626 aaPredicted RBP26.68■■□□□ 1.86
FXN-203ENST00000396366 STAC3Q96MF2 364 aa26.68■■□□□ 1.86
FXN-203ENST00000396366 KRT28Q7Z3Y7 464 aa26.66■■□□□ 1.86
FXN-203ENST00000396366 QTRT2Q9H974 415 aaKnown RBP26.66■■□□□ 1.86
FXN-203ENST00000396366 PHF8Q9UPP1 1060 aa26.66■■□□□ 1.86
FXN-203ENST00000396366 MINK1Q8N4C8 1332 aaPredicted RBP26.65■■□□□ 1.86
FXN-203ENST00000396366 KIF1AQ12756 1690 aa26.65■■□□□ 1.86
FXN-203ENST00000396366 USP32Q8NFA0 1604 aa26.63■■□□□ 1.85
FXN-203ENST00000396366 SPATA31A3Q5VYP0 1347 aa26.63■■□□□ 1.85
FXN-203ENST00000396366 PMFBP1Q8TBY8 1022 aa26.62■■□□□ 1.85
FXN-203ENST00000396366 ADGRB2O60241 1585 aa26.6■■□□□ 1.85
FXN-203ENST00000396366 USP21Q9UK80 565 aa26.6■■□□□ 1.85
FXN-203ENST00000396366 FNBP4Q8N3X1 1017 aaPredicted RBP26.58■■□□□ 1.85
FXN-203ENST00000396366 PRR36Q9H6K5 1346 aa26.58■■□□□ 1.85
FXN-203ENST00000396366 ARHGEF28Q8N1W1 1705 aaKnown RBP26.57■■□□□ 1.84
FXN-203ENST00000396366 PLEKHG5O94827 1062 aa26.57■■□□□ 1.84
FXN-203ENST00000396366 RBM6P78332 1123 aaKnown RBP26.57■■□□□ 1.84
FXN-203ENST00000396366 PSME1Q06323 249 aa26.57■■□□□ 1.84
FXN-203ENST00000396366 NBPF1Q3BBV0 1214 aa26.57■■□□□ 1.84
FXN-203ENST00000396366 WASLO00401 505 aaPredicted RBP26.56■■□□□ 1.84
FXN-203ENST00000396366 SIN3AQ96ST3 1273 aa26.56■■□□□ 1.84
FXN-203ENST00000396366 ANKARQ7Z5J8 1434 aa26.56■■□□□ 1.84
FXN-203ENST00000396366 MARF1Q9Y4F3 1742 aaKnown RBP26.54■■□□□ 1.84
FXN-203ENST00000396366 CABLES1Q8TDN4 633 aa26.54■■□□□ 1.84
FXN-203ENST00000396366 CDK12Q9NYV4 1490 aaPredicted RBP26.54■■□□□ 1.84
FXN-203ENST00000396366 RGS12O14924 1447 aa26.52■■□□□ 1.84
FXN-203ENST00000396366 TNS3Q68CZ2 1445 aa26.52■■□□□ 1.84
FXN-203ENST00000396366 LMOD2Q6P5Q4 547 aa26.52■■□□□ 1.84
FXN-203ENST00000396366 UPF1Q92900 1129 aaKnown RBP eCLIP26.51■■□□□ 1.83
FXN-203ENST00000396366 TRPC5Q9UL62 973 aaPredicted RBP26.51■■□□□ 1.83
FXN-203ENST00000396366 KIAA1210Q9ULL0 1709 aa26.51■■□□□ 1.83
FXN-203ENST00000396366 TULP4Q9NRJ4 1543 aa26.5■■□□□ 1.83
FXN-203ENST00000396366 BCL9LQ86UU0 1499 aa26.5■■□□□ 1.83
FXN-203ENST00000396366 L3MBTL2Q969R5 705 aa26.5■■□□□ 1.83
FXN-203ENST00000396366 SBNO1A3KN83 1393 aa26.49■■□□□ 1.83
FXN-203ENST00000396366 NEUROD1Q13562 356 aa26.48■■□□□ 1.83
FXN-203ENST00000396366 ATRNO75882 1429 aa26.48■■□□□ 1.83
FXN-203ENST00000396366 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
FXN-203ENST00000396366 NUDT16Q96DE0 195 aaKnown RBP26.46■■□□□ 1.83
FXN-203ENST00000396366 CDK19Q9BWU1 502 aa26.46■■□□□ 1.83
FXN-203ENST00000396366 HAP1P54257 671 aaPredicted RBP26.45■■□□□ 1.82
FXN-203ENST00000396366 TRPM3Q9HCF6 1732 aaPredicted RBP26.45■■□□□ 1.82
FXN-203ENST00000396366 NGDNQ8NEJ9 315 aaKnown RBP26.43■■□□□ 1.82
FXN-203ENST00000396366 ARHGEF10O15013 1369 aa26.42■■□□□ 1.82
FXN-203ENST00000396366 GPRASP1Q5JY77 1395 aa26.42■■□□□ 1.82
FXN-203ENST00000396366 ATP7BP35670 1465 aa26.42■■□□□ 1.82
FXN-203ENST00000396366 SLIT2O94813 1529 aa26.41■■□□□ 1.82
FXN-203ENST00000396366 ABCA3Q99758 1704 aa26.41■■□□□ 1.82
FXN-203ENST00000396366 UNC5CLQ8IV45 518 aa26.4■■□□□ 1.82
FXN-203ENST00000396366 GJD4Q96KN9 370 aaPredicted RBP26.39■■□□□ 1.82
FXN-203ENST00000396366 ALS2Q96Q42 1657 aa26.38■■□□□ 1.81
FXN-203ENST00000396366 PAK3O75914 559 aaPredicted RBP26.38■■□□□ 1.81
FXN-203ENST00000396366 ITSN1Q15811 1721 aa26.36■■□□□ 1.81
FXN-203ENST00000396366 FAM83GA6ND36 823 aa26.36■■□□□ 1.81
FXN-203ENST00000396366 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.36■■□□□ 1.81
FXN-203ENST00000396366 CENPJQ9HC77 1338 aaPredicted RBP26.35■■□□□ 1.81
FXN-203ENST00000396366 CCDC61Q9Y6R9 512 aa26.33■■□□□ 1.81
FXN-203ENST00000396366 PLCH1Q4KWH8 1693 aa26.33■■□□□ 1.81
FXN-203ENST00000396366 GLI3P10071 1580 aa26.33■■□□□ 1.8
FXN-203ENST00000396366 RALGAPBQ86X10 1494 aa26.32■■□□□ 1.8
FXN-203ENST00000396366 CABP2Q9NPB3 220 aa26.32■■□□□ 1.8
FXN-203ENST00000396366 ACEP12821 1306 aa26.32■■□□□ 1.8
FXN-203ENST00000396366 TRPM1Q7Z4N2 1603 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms