RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ATP10AO60312 1499 aa18.43■□□□□ 0.54
SREBF1-205ENST00000395757 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
SREBF1-205ENST00000395757 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
SREBF1-205ENST00000395757 CDK19Q9BWU1 502 aa18.42■□□□□ 0.54
SREBF1-205ENST00000395757 C14orf93Q9H972 538 aaKnown RBP18.42■□□□□ 0.54
SREBF1-205ENST00000395757 NCKAP5LQ9HCH0 1330 aa18.41■□□□□ 0.54
SREBF1-205ENST00000395757 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
SREBF1-205ENST00000395757 MAST1Q9Y2H9 1570 aa18.4■□□□□ 0.54
SREBF1-205ENST00000395757 MS4A1P11836 297 aa18.39■□□□□ 0.53
SREBF1-205ENST00000395757 C1orf115Q9H7X2 142 aa18.39■□□□□ 0.53
SREBF1-205ENST00000395757 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
SREBF1-205ENST00000395757 RLBP1P12271 317 aa18.39■□□□□ 0.53
SREBF1-205ENST00000395757 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
SREBF1-205ENST00000395757 STAC3Q96MF2 364 aa18.39■□□□□ 0.53
SREBF1-205ENST00000395757 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
SREBF1-205ENST00000395757 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
SREBF1-205ENST00000395757 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
SREBF1-205ENST00000395757 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
SREBF1-205ENST00000395757 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
SREBF1-205ENST00000395757 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
SREBF1-205ENST00000395757 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
SREBF1-205ENST00000395757 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
SREBF1-205ENST00000395757 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-205ENST00000395757 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
SREBF1-205ENST00000395757 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
SREBF1-205ENST00000395757 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
SREBF1-205ENST00000395757 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
SREBF1-205ENST00000395757 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
SREBF1-205ENST00000395757 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
SREBF1-205ENST00000395757 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
SREBF1-205ENST00000395757 GZF1Q9H116 711 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-205ENST00000395757 RWDD1Q9H446 243 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-205ENST00000395757 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.52
SREBF1-205ENST00000395757 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
SREBF1-205ENST00000395757 ABCC1P33527 1531 aa18.33■□□□□ 0.52
SREBF1-205ENST00000395757 TRPM1Q7Z4N2 1603 aa18.33■□□□□ 0.52
SREBF1-205ENST00000395757 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
SREBF1-205ENST00000395757 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
SREBF1-205ENST00000395757 NOB1Q9ULX3 412 aaKnown RBP18.32■□□□□ 0.52
SREBF1-205ENST00000395757 NME9Q86XW9 330 aa18.31■□□□□ 0.52
SREBF1-205ENST00000395757 SEC24BO95487 1268 aa18.31■□□□□ 0.52
SREBF1-205ENST00000395757 RBM33Q96EV2 1170 aaKnown RBP18.31■□□□□ 0.52
SREBF1-205ENST00000395757 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
SREBF1-205ENST00000395757 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
SREBF1-205ENST00000395757 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-205ENST00000395757 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-205ENST00000395757 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-205ENST00000395757 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
SREBF1-205ENST00000395757 NFKBIBQ15653 356 aa18.29■□□□□ 0.52
SREBF1-205ENST00000395757 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
SREBF1-205ENST00000395757 FYB1O15117 783 aa18.29■□□□□ 0.52
SREBF1-205ENST00000395757 NPATQ14207 1427 aa18.29■□□□□ 0.52
SREBF1-205ENST00000395757 BECN1Q14457 450 aa18.29■□□□□ 0.52
SREBF1-205ENST00000395757 PRDM15P57071 1507 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-205ENST00000395757 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
SREBF1-205ENST00000395757 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
SREBF1-205ENST00000395757 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-205ENST00000395757 FAM83GA6ND36 823 aa18.27■□□□□ 0.51
SREBF1-205ENST00000395757 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.51
SREBF1-205ENST00000395757 SLC4A10Q6U841 1118 aa18.27■□□□□ 0.51
SREBF1-205ENST00000395757 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.51
SREBF1-205ENST00000395757 RTEL1-TNFRSF6BF6WH68 1400 aa18.27■□□□□ 0.51
SREBF1-205ENST00000395757 ZNF428Q96B54 188 aa18.26■□□□□ 0.51
SREBF1-205ENST00000395757 ERVK-7P63135 1459 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 COG3Q96JB2 828 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 EIF2AK4Q9P2K8 1649 aaKnown RBP18.25■□□□□ 0.51
SREBF1-205ENST00000395757 CLTCL1P53675 1640 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 TMEM57Q8N5G2 664 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
SREBF1-205ENST00000395757 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
SREBF1-205ENST00000395757 YEATS2Q9ULM3 1422 aa18.22■□□□□ 0.51
SREBF1-205ENST00000395757 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
SREBF1-205ENST00000395757 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
SREBF1-205ENST00000395757 ZMYM4Q5VZL5 1548 aa18.22■□□□□ 0.51
SREBF1-205ENST00000395757 TRIM27P14373 513 aa18.22■□□□□ 0.51
SREBF1-205ENST00000395757 A0A1W2PP64 1363 aa18.22■□□□□ 0.51
SREBF1-205ENST00000395757 PTPRTO14522 1441 aa18.21■□□□□ 0.51
SREBF1-205ENST00000395757 IPO8O15397 1037 aaKnown RBP18.21■□□□□ 0.51
SREBF1-205ENST00000395757 E9PCH4 1651 aa18.21■□□□□ 0.51
SREBF1-205ENST00000395757 ZNF521Q96K83 1311 aa18.21■□□□□ 0.51
SREBF1-205ENST00000395757 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
SREBF1-205ENST00000395757 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
SREBF1-205ENST00000395757 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
SREBF1-205ENST00000395757 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
SREBF1-205ENST00000395757 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
SREBF1-205ENST00000395757 UNC13BO14795 1591 aa18.2■□□□□ 0.5
SREBF1-205ENST00000395757 KDM2BQ8NHM5 1336 aa18.19■□□□□ 0.5
SREBF1-205ENST00000395757 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
SREBF1-205ENST00000395757 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
SREBF1-205ENST00000395757 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
SREBF1-205ENST00000395757 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
SREBF1-205ENST00000395757 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
SREBF1-205ENST00000395757 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
SREBF1-205ENST00000395757 TRPM2O94759 1503 aa18.17■□□□□ 0.5
SREBF1-205ENST00000395757 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
SREBF1-205ENST00000395757 TSPYL6Q8N831 410 aa18.17■□□□□ 0.5
SREBF1-205ENST00000395757 PDE4CQ08493 712 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms